Cololabis saira (Pacific saury): 133452236
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Entry
133452236 CDS
T09849
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133452236 (kcnn1a)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
133452236 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DUF6775
Motif
Other DBs
NCBI-GeneID:
133452236
NCBI-ProteinID:
XP_061587439
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Position
10:complement(33610209..33690494)
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AA seq
961 aa
AA seq
DB search
MRHRCAGAVHQHHQQHQHHIPEQLIPEQLIPEQRSGVFSLPPPPCDHRARAPTTGAHCHS
LQQLPCLTQPSRRPVPGGEPLPLASFTTQRPHRGGEASTGLPAHLQQQDPWAPPSPLFPP
PIPPPPPTSSSSLLLSRESKRADRLVKSAQHHHQQASTVDRCRGGGGAGGQRDHRQLLQQ
QQHQQQQQQQQQHCHLRLQQRDPSPEGNSANSPKGRSLHVRESAESRSAFESRSQQELQL
QQQQIPQLRAQQQLLVGSSLPVNYCASGSGELCRTQQAPLLQQPEQQQRQQRLQGVCLQR
PQLHRDQDRGRSGNSSVHSGQQAQPHAPPVTATPQAYVHGNSSASGSNSSGYSPNYGSSY
NLWPESPHTGEERIRIDLHKATTEQRKLSHAGSKPSLSESSGRLPQIAMNTCKYNGGVVR
PLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREGSGR
GGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKES
SYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVC
AIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDAS
SRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSN
FLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEK
HVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQLRS
VKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVTGSLQAL
PCLISQAISQQQQDFLDGFVHRFRPASLASERSERSERSWTSTTRRRRSPSTAPHTSSDS
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtgcgcgggagctgtccatcagcaccatcagcagcatcagcaccacatc
cccgagcagctcatccccgagcagctcatccccgagcagcgcagcggagtcttcagcctg
ccgcccccgccctgcgaccaccgagcccgagctccgaccaccggcgcgcactgccacagc
ctccagcagctcccatgtctgactcagccctcccggagacccgttcccggcggagagcct
cttccactggcgagcttcaccacccagcgcccgcaccgaggcggtgaagccagcaccggg
ctgccggcgcacctgcagcagcaggatccctgggccccgccctccccactttttccgcct
cctataccaccaccgccaccaacgtcgtcctcctcccttctcctttcccgggaatctaaa
cgagcggatcgtctcgtgaagagtgcccagcatcatcaccaacaggcgagcaccgtggac
cgctgcaggggaggaggaggagcgggagggcagcgagaccacaggcagctgttgcagcag
cagcagcatcagcagcagcagcagcagcagcagcagcactgtcacttaagactccaacag
agggacccctcccctgaaggaaacagtgcaaactcaccgaaagggcgctctttacatgta
cgcgagtccgctgagtccaggagcgcattcgagtctcggagtcagcaggagctgcagctg
cagcagcaacagatcccacaattgcgagcgcagcaacagctgctggtgggaagcagcttg
cctgtcaactactgcgccagtggctcaggagagctatgtaggactcagcaggctccactg
ctgcagcagccagagcagcagcagcggcagcagcggctccagggggtctgtctccagcgg
ccacagctccaccgggaccaggaccgcggcagatccgggaacagctccgtgcacagcggc
cagcaggcgcagccacacgcccccccggtaacggcaacgccacaggcatacgtgcatggg
aactcgtctgcaagtggcagcaacagtagcggatacagccccaactacggctccagctat
aacctgtggccggagagcccgcacacgggagaggagaggatacgcattgatctccataag
gccactactgagcagaggaagctgagccatgctggatccaagccctctctctccgagagc
agtggccgactccctcagatagccatgaacacctgcaagtacaatggcggagtggtgaga
ccgttagtgggcagcctggcgtcctcgtcgcgccgcaaccttgcagagcttgactcggag
acgcaacccttgcagacgctgcacagctccggcctggaggtggtggtgtccaagggcaac
ggtggcgaagaccccagtaaggcgtccaacgagagcttggtcagggagggcagcgggcga
ggtggaggcagggctccgcagaagaaaaacagggacattggctacaagctcggtcaccgg
agggcactgtttgagaagcggaagcggctcagcgattacgcactcatctttgggatgttt
gggattgttgtcatggtgacagagacagagctatcatggggggtttacactaaggaatct
tcatactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtctt
ataataatgtaccatgcccgggaaatccagctcttcatggtcgacaacggtgcggacgat
tggaggatagccatgacgtacgagcgaattttcttcattgtgcttgagctgctggtgtgt
gccattcaccccatcccaggccagtatgtcttcacttggacggcacgactggcttttacc
tacacgccatctgtggctgacgccgacgtggacatcattctctctattcccatgttcctg
agactctacctgattggcagggtcatgttactccacagcaagctgttcacagatgcttcc
tcccgcagcataggtgccctcaacaagatcaacttcaacacgcgcttcgtcatgaagacc
ctcatgaccatctgcccaggaacggtcttattggtgttcagtatatcttcctggatcatt
gctgcatggactgtgcgggtctgtgagaggtatcatgacaaacaggaagtgaccagtaac
ttcctgggagccatgtggctcatctcgataaccttcctctctattggctatggggacatg
gtaccacacacgtactgtgggaaaggtgtgtgtctgcttacagggatcatgggtgccggt
tgcacagcactagtagtcgcggtggttgccagaaagctggagttgaccaaggctgagaag
catgtccacaacttcatgatggacacacaactctgcaaacgagtcaagaacacagctgcc
aatgtactcagggaaacatggctcatttacaaacacaccaagctcgtcaagaagatagac
catgccaaggtgcgaaaacaccagcgcaagtttctccaagccattcaccaactgcgcagt
gtgaagatggagcagaggaaactcaacgaccaggccaacaccttggtggacctggcaaag
acccagaatgtgatgtatgacctggtgtcagagctgcaggagcgcagtgaggagttggac
aagcgtatcggcacattggaggacaagctggactcggtgacgggcagcttgcaggcgctg
ccctgcctcatctcccaagccatatcccagcagcagcaggacttcctggacggctttgtt
caccgcttccggcctgcttctctagcatcggagcgctccgaacgctcagagcgatcttgg
acttccaccacccgtaggcggcgttctccctccacagcaccacacacctcctctgatagc
ggataa
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