Cololabis saira (Pacific saury): 133452304
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Entry
133452304 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133452304
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133452304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
LRR_1
PRY
PYRIN
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133452304
NCBI-ProteinID:
XP_061587524
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Position
10:complement(2244934..2262323)
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AA seq
1169 aa
AA seq
DB search
MDQCEDETVPLEQKGGREAQSSQLQTHDDVTSQDQDDSREVMTSRSDSYTVKMWLKDTLK
NLDSSGLKEFQWYLNNAEESKDGFKPIELCYLEKADRLDTVNLMMQRFSSKTREVAETIL
KKLKGKPVVQDDPVSPAGATGTVVEVCKKLKSKLQKKYQCVSEGITKAGKKTLLEQIYTE
LYITEGGTGEVNHEHEVRQIEAASRKPGKAETTIRQEDIFKPPPGRGGSIRTVMTKGVAG
IGKTVLTQKFSLDWAEGRTNQDIQFLLPFTFRQLNVLKERMFSLLELIHRFFSETRGICS
FEEFQVVFIFDGLDESRLSLDFHNNEDLTDVTESTSVDVLLTNLIKGNLLPSARLWITTR
PAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRGEEQTSRIISHIKTSRSLHIMCHIP
VFCWITATVLENVLEKVLETREGGGLPKTLTEMYIHFLVVQAKLKRVKYDGGAETDPHWS
PGSRKMIKSLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFTQIFREESGLYED
QDQVFCFIHLSVQEFLAALHVHQTFIKSGVNLLEEQKNIFRWFKKRAVTKLHQTAVDMAL
QSPNGHLDLFLRFLLGLSLETNQNLLRGLMKSKQRSSQNNQETIKHIKEKISEDLSAERS
INLFHCLNELNDRSLVEEVQRSLRSGRLSTDELSPAQWSALAFILLSSDLEVFDLKKFSA
SEEALRRLLPVVKASKKAVLSDCHLSGNICEDLSSVLSSQSSSLTELDLSNNHLQDSGLE
QLCPGLESPHCKLESLRLSLCNLSGNICPLLSSVLSSQSSSLTELDLSNNHLQDSGLEQL
CPGLESPHCHLESLRLSGCHLSEDICPLLSSVLSSQSSSLTELDLSNNDLQDSGLEQLCP
GLESPHCHLESLRLSGCLISEEGSSSLVSALTSNPSHLRELDLSYNDPGESAWKLLSRLE
DPRWRLDTLRVEPAGQRFLTPGLRKYSCQLTVDTNTVNNKIQLSDNNRKMTLVLHAQSYP
DYPDRFDVKPQLLCREVLTGHCYWEVQWSGEVSVSVSYRRISRKGNSNDCWFGGNDHSWS
LDCFPGGRRYRVHHNNRKTSITFSSPSPDSDRVAVYVDVPAGTLSFYKVDSDRLIHIHTF
NTSFTEPLCAGFGLWPWSSSVPSVSLCPV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacgagacagttcctctggaacagaagggaggacgagaagctcag
agcagtcagcttcaaacacatgacgatgtgacgtctcaggaccaggatgactccagggaa
gtgatgacctccaggagtgacagctatactgtaaaaatgtggttgaaggacactttgaag
aatttggactccagtgggctgaaggaattccagtggtacctgaataatgcagaagaatca
aaggatggtttcaaaccgatcgaactgtgttatctggaaaaggcggacagattggacaca
gtaaatctgatgatgcagaggttctcctcaaagaccagagaggtggccgagacgatttta
aagaagttaaaaggaaaacctgttgtccaggacgatccagtctctccagctggtgcaaca
ggtacggtagttgaagtttgtaaaaagttgaagtctaagctgcagaagaagtaccagtgt
gtgtctgaggggatcactaaagcaggaaagaaaacccttctggagcagatctacacggag
ctctacatcacagagggagggaccggagaggtcaaccatgaacatgaagtcagacagatt
gaagcagcttccaggaaaccaggcaaagcagaaacaaccatcagacaggaagacatattt
aaacccccacctggaagaggggggtcaatcagaacagtgatgacgaagggagtggccggc
atcgggaaaacagtcctaacacagaagttcagtctggactgggctgaaggcagaaccaac
caggacatccagttcctgcttccattcaccttcagacagctgaatgtgctaaaagagaga
atgttcagcttgttggaactaattcatcgattcttctctgaaaccagaggaatctgcagc
tttgaagagttccaggtcgtgttcatctttgacggtctggatgagagtcgactttctctg
gacttccacaacaatgaggacctgactgatgttacagagtccacctcagtggatgtgctg
ctgacaaacctcatcaaggggaacctgcttccttctgctcgtctctggatcaccacacga
cccgcagcagccaatcagatccctcctgagtgtgttgacatggtgacggaggtcagaggg
ttcactgacccacagaaggaggaatacttcaggaagaggttcagaggagaggagcagacc
agcaggatcatctcccacatcaagacatcacggagcctccacatcatgtgccacatccca
gtcttctgctggatcactgctacggtcctggagaacgtcctggagaaagtcctggaaacc
agagagggaggggggctgcccaagaccctgactgagatgtacatccacttcctggtggtc
caggccaaactgaagagggtcaagtatgacggaggagctgagacggatccacattggagt
ccggggagcaggaagatgatcaagtctctgggaaaactggcttttgagcagttgcagaaa
ggaaacctgatcttctatgaaccagacctgagagagtgtggcatcgatgtcagagaggct
tcagtgtactcaggagtgttcacccagatctttagagaggagagcggcctgtacgaggac
caggaccaggtcttctgcttcatccatctgagtgtccaggagtttctggctgctcttcat
gtccatcagaccttcatcaagtctggagtcaacctgctggaggaacaaaagaacatcttc
aggtggtttaaaaaaagagctgtgactaagctccatcagactgctgtggacatggcctta
cagagtcccaacggacacctggacttgttcctccgtttcctcctgggtctttcactggag
accaatcagaaccttctacgaggtctgatgaaatcaaaacaaagaagttcacagaacaat
caggaaactatcaaacacatcaaggagaagatcagtgaggatctgtctgcagagagaagc
atcaacctgttccactgtctgaatgaactgaatgatcggtctctggtggaggaggtccaa
cggtccctgaggtcaggacgtctctccacagatgaactgtctcctgctcagtggtcggct
ctggccttcatcttactgtcatcagatctggaggtgtttgacctgaagaagttctcagct
tcagaggaggctctacggaggctgctgccggtggtcaaagcctccaagaaagctgtactg
agtgactgtcacctctcagggaacatctgtgaagatctgtcctcagttctcagctctcag
tcctccagtctgacagaactggacctgagtaacaaccacctgcaggattctggactggag
cagctgtgtcctggactggagagtccacactgtaaactggagtctctcaggttgagtctc
tgtaacctctcagggaacatctgtccacttctgtcctcagttctcagctctcagtcctcc
agtctgacagaactggacctgagtaacaaccacctgcaggattctggactggagcagctg
tgtcctggactggagagtccacactgtcacctggagtctctcagactgagtggctgtcac
ctctcagaggacatctgtccacttctgtcctcagttctcagctctcagtcctccagtctg
acagaactggacctgagcaacaacgacctgcaggattctggactggagcagctgtgtcct
ggactggagagtccacactgtcacctggagtctctcaggctgtcaggctgtctgatctca
gaggaaggaagttcttctctggtctcagctctgacctccaacccctcccacctgagagag
ctggacctgagctacaacgatccaggggagtcagcatggaagcttctgtctagactggag
gatccccgctggagactggacactctcagggtggagcctgctggacaacgatttctgaca
ccaggtctgaggaagtattcctgtcaactcaccgtcgacacaaacacagtcaacaacaag
atccaactgtctgacaacaacaggaagatgacacttgtgttgcatgctcagtcatatcct
gattatccagacaggtttgatgttaaacctcagctgctgtgtagagaagttctgacgggt
cactgttactgggaggtccagtggagcggagaggtttctgtatcagtgagttacagaaga
atcagcaggaaaggaaactctaatgactgttggtttggaggaaacgatcattcctggagt
ctggattgttttccaggtggtcgtcggtaccgtgtccatcacaataacagaaaaacatcc
atcaccttctcatctccatctccagactctgacagagtagcagtgtacgtggacgttcct
gctggaactctgtccttctataaagtcgactctgacagactgatccacatccacaccttc
aacaccagcttcactgaacctctctgtgctggatttggactctggccctggtccagttct
gttccctcagtgtctctgtgtccagtttag
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