Cololabis saira (Pacific saury): 133452312
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Entry
133452312 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133452312
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133452312
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133452312
NCBI-ProteinID:
XP_061587532
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Position
10:3145544..3165862
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AA seq
1189 aa
AA seq
DB search
MDQCEDGEDGVPPSKTSLCEEHESRSKAQRNQPGPGPGPGPGPGPGPGLGPGPGPGCKRR
PGPGPELGPGPGPSCVSLKSDNSKDDGINFKGEQRSAVKRVHQKGDSLEHEPSCLSLKSN
RSRGWLIEFKGDQHSSSERVDQQISQSPSGPSVQQHQTQLDSVFQLLEDNIVMFVKNELK
KIQRALSPDYPESLEHLLQGEDEEQGRSSREAFVKITVNFLRRMKQEELAEHLQSNISAA
GCKKRLKSKLKKKSQCVFEGIIKAGNPTLLKQIYTELYITEGGTGEVNDEHEVRQIEAAS
RKPDRAETAIRQEDIFKLPPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEGKANQDNQ
LLLPFTFRELNVLKGRRFSLVELVHHFFSETREMCSFEEFQVVFIFDGLDESRLPLDFHN
NEVLTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPKCVSMMTEVRGFTDP
QKEEYFRKRFREEEQTRIISHIKTSRSLHIMCHIPVFCWITATVLENVLEKVLETREGGE
LPKTLTEMYIHFLVVQAKLKRVKYDGGAETDPHWSPESRKMVESLGKLAFEQLQKGNLIF
YEPDLRECGIDVRDASVYSGVFTQIFREESSLYQNQVFCFIHLSVQEFLAALHVHQTFIK
SGVNLLDEQRNTKTDLYETAVDKALQSPNGHLDLFLRFLLGLSLETNQTLLRGLLEPKER
SSQNNQGTVEYIKKKISEDVSAERSINLFHCLNELNAGSLVEEVQRSLRSGRLSTGKLSP
AQWSALGFILLSSGEDLEVFDLKKYSASEEVLRRLLPVVKASKKVVLSGCNLSEDICPLL
SSVLSSQSSSLTELDLSNNHLQDSGLEQLFPGLESPHCHLESLRLSGCNLSGNICPLLSS
VLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCHLESLRLSGCLISEEGSASLVSAL
SSNPSHLRELDLSYNHPGESAVKLLSRLEDPSWRLDTLRVDPAGQRWMTPGPWKYSCQLT
IDTNTVHKRIQLSDNNRKMMCVKEDQSYPDHPDRFHSWPQLLCREVLMGRCYWEVQRRGG
VSVSVSYRRISRKGNSGDCVFGWNDHSWNLFCSDDGQYRVWHNNRLTSSSSSSSVSDRVA
VYVDVPAGTLSFYSVSSDRLILLHTFNTKFTEPLYPGFWFGSGSSVSLC
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacggagaggacggagtccctccctctaaaacctctctgtgtgag
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctggacctgga
cctggacccggacccggacctggacttggacctggacctggacctggatgtaaacgtaga
cctggacctggacctgaacttggacctggacctggacccagctgtgtgtccttgaagagc
gacaactcaaaggacgatggtattaacttcaaaggagagcaacgttcggctgtaaagagg
gtccatcagaaaggagactctcttgaacatgaacccagctgtttgtccttgaagagcaac
cggtcaaggggctggttaattgaatttaaaggagaccaacattcttcttcagagagagtg
gaccagcagatctcacagtcccccagtggtccgtctgtccagcagcatcagacccagctg
gactccgtctttcagctgctggaggacaacattgtcatgtttgtgaagaatgagctgaag
aagatccagagggctctgagtccagattacccagaatccctagagcatctgttgcagggt
gaggatgaagaacaggggaggagcagcagagaggcgtttgtgaagatcacagtgaacttc
ctgaggagaatgaagcaggaggagctggctgagcatctgcagagcaatatttctgctgca
ggttgtaaaaagcggctgaagtcgaagctgaagaagaagtcccagtgtgtgtttgagggg
atcattaaagcaggaaacccaacccttctgaagcagatctacacagagctctacatcaca
gagggagggactggagaggtcaacgatgaacatgaagtcagacagattgaagcagcttcc
aggaaaccagacagagcagaaacagccatcagacaggaagacatctttaaactcccacct
ggaagagatgaaccaatcagaacggtgatgacgaagggagtggccggcatcgggaaaaca
gtcctaacacagaagttcactctggactgggctgaaggcaaagccaaccaggacaaccag
ttactgcttccattcaccttcagggagctgaatgtgctaaaagggagaaggttcagcttg
gtggaacttgttcatcacttcttcagtgaaaccagagaaatgtgcagctttgaagagttc
caggtcgtgttcatctttgacggtctggatgagagtcgacttcctctggacttccacaac
aatgaggttctgactgatgttacagagtccacctcagtggacgtgctgctgacaaacctc
atcagggggaacctgcttccttctgctcgtctttggatcaccacacgacccgcagcagcc
aatcagatccctcctaagtgtgtttccatgatgacagaggtcagagggttcactgaccca
cagaaggaggaatacttcaggaagaggttcagagaagaggagcagaccaggatcatctcc
cacatcaagacatcacggagcctccacatcatgtgccacatcccagtcttctgctggatc
actgctacggtcctggagaacgtcctggagaaagtcctggaaaccagagagggaggggag
ctgcccaagaccctgactgagatgtacatccacttcctggtggtccaggccaaactgaag
agggtcaagtatgatggaggagctgagacggatccacactggagtccagagagcaggaag
atggtggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttc
tatgaaccagacctgagagagtgtggcatcgatgtcagagacgcttcagtgtactcagga
gtgttcacccagatctttagagaggagagcagcctgtaccagaaccaggtcttctgcttc
atccatctgagtgtccaggagtttctggctgctcttcatgtccatcagaccttcatcaag
tctggagtcaacctgctggacgaacaaagaaacacaaagactgacctctatgagacagct
gtggacaaggctttacagagtcccaacggacacctggacttgttcctgcgcttcctcctg
ggtctttcactggagaccaatcagactctcctacgaggtctgttggaaccaaaagaaaga
agttcacagaacaatcagggaacagttgaatacatcaagaagaagatcagtgaggatgtg
tctgcagagagaagcatcaacctgttccactgtctgaatgaactgaacgctggttctctg
gtggaggaggtccaacggtccctgaggtctggacgtctctccacaggtaaactgtctcct
gctcagtggtcggctctgggcttcatcttactgtcatcaggagaagatctggaggtattt
gacctgaagaaatactcagcttcagaagaggttctacggaggctgctgccggttgtcaaa
gcctccaagaaagttgtgttgagtggctgtaacctctcagaggacatctgtccacttctg
tcctcagttctcagctctcagtcctccagtctgacagaactggacctgagtaacaaccac
ctgcaggattctggactggagcagctgtttcctggactggagagtcctcactgtcacctg
gagtctctcaggttgagtggttgtaacctctcagggaacatctgtccacttctgtcctca
gttctcagctctcagtcctccagtctgacagaactggacctgagtaacaaccacctgcag
gattcaggactgaagaagctgtgtcctggactggagagtccacactgtcacctggagtct
ctcaggctgtcaggctgtctgatctcagaggaaggaagtgcttctctggtctcagctctg
agctccaacccctcccacctgagagagctggacctgagctacaaccatccaggagagtca
gcagtgaagcttctgtctagactggaggatcccagctggagactggacactctcagggtg
gatcctgctggacaacgatggatgacaccaggtccatggaagtattcctgtcaactcacc
atcgacacaaacacagtccacaaacgcatccaactgtctgacaacaacaggaagatgatg
tgtgtgaaggaggatcagtcatatcctgatcatccagacaggtttcattcctggcctcag
ctgctgtgtagagaagttctgatgggtcgctgttactgggaggtccagaggagaggagga
gtttctgtatcagtgagttacagaagaatcagcaggaaaggaaactctggtgactgtgtg
tttggatggaacgatcattcctggaatctgttctgttctgatgatggtcagtaccgtgtc
tggcacaataacagactaacatcttcctcctcctcttcctcagtctctgacagagtagca
gtgtatgtggacgttcctgctggaactctgtccttctacagcgtctcctctgacagactg
atcctcctccacaccttcaacaccaaattcactgaacctctctatcctgggttctggttt
ggttctggttcttcagtctctctgtgttga
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