Cololabis saira (Pacific saury): 133452314
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Entry
133452314 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133452314
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133452314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
FISNA
NLRC4_HD2
NACHT
UPA-FIIND
NOD2_WH
LRR_6
PYRIN
LRR_1
LRR_4
Trypan_PARP
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133452314
NCBI-ProteinID:
XP_061587536
LinkDB
All DBs
Position
10:complement(5275005..5318934)
Genome browser
AA seq
1445 aa
AA seq
DB search
MDQCEDRDEGVRPSKTSLCGEHESRSKAQRNQPGPGPGPGPGPGPGPGPEPGPGPGPGSG
PGPGPGPGPGPGPGPGPEPGPGPSCLSLKSDWSNDRFIDFKGDQRSSSERVDQQSSESPS
GPSVQQPQTQLDSVFQLLEDNIVMFVKDELKKIQKVLSPDYPESLDHLLQGEDEEQRRSS
REAFLKITVNFLRRMKQEELAERLQRSSFAAVCKKRLKSKLKKKSQCVFEGIVKAGNPTL
LEQIYTELYITEGGTGEVNDEHEVRQIEAASRKPDRAETAIRQEDIFKLPPGRGGPIRTV
MTKGVAGIGKTVLTQKFTLDWAEGRTNQDIQLLLPFTFRQLNVLREEKFSLVELVHGFFS
ETKGICNFEKFQVVFIFDGLDESRLPLDFPNSTIVSDPRRSTSVDVLLTNLIRGNLLPSA
RLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRKRSRDEEQTSKIISHIKTSRSL
HIMCCIPVFCWITATVLENVLENVLETRKGGKLPKTLTEMYIHFLVVQAKLKRVMYDGGA
GTDPHWSPESRKMIKSLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFTQIFRE
ESGLYQDHVFCFIHLSVQEFLAALHVHQTFISSGVNLLEEQKNIFWWFKKRAVTKLHQSA
VDKALQSPNGHLDLFLRFLLGLSLETNQILLRGLLEPKQRRSQNNQETVKYIKEKINDRD
LPAERSINLFHCLNELNDGSLVEEVQESLKFERLSTEKLSHAQWSALVFILLSSEEDLEV
FDLKKYSASEEVLRRLLPVVKASKKAVLSGCNLSEDICPLLSSVLSSQSSSLTELDLSYN
HLHDSGLENLCPGLESPHCKLESLRLSGCSLSGSICPLLSSVLSSQSSSLTELDLSNNDL
QDSGLKQLCPGLESPHCHLESLRLSGCLISEEGSASLVSALTSNPSHLRELDLSYNHPGE
SAGKLLSRLEDPRWRLHTLRVQPAGQQWLTPGLRKYKWASSSLEPEGHASVTEKSSIWTK
VEPEVNDTAAGEATTYRLQSAAGHFECSVSGLRWVCKEGVGLKYQFRSWEGHMERMKSRQ
YSPAGPLMDVTLITGKINEVLLPHWVCIDDIPNLLENFKVLHINESGEVLETASEVTPSH
VRLMEPDFSLFAVLVSYFFRRKVSSDMLIYYQPHATFLKLRLYLIPHDPGLQEAVNKSES
LNRFERIKKHRPDEYLEMDQGFSLNATVDTVRVQPEKITLRYDSQDPNCYEVYMENPDRQ
FSLELRKKSSPNDHPVWICEFWESDYPKSGPSNEATSVRTAAHGAAGPGGPADAPSETES
ANMEQKTPKKILKDSLMNLSEENFKEFCHALLDRKEKPHIFRMKVEGKSRLEIADVMIST
FTDQGALKVAEEILREIGCTKAANKLTKEGGAAGPARPGGPGGPAGPAGSPKEELGPEWA
KRSPR
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacagagatgagggagtccgtccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctggacctgga
cctggacctggacctggacctggacctgaacctggacctggacctggacccggatccgga
cccggacccggacccggacccggacccggacccggacccggacccggacccgaacccgga
cccggacccagctgtttgtccttgaagagcgactggtcaaatgatagatttattgacttt
aaaggagaccaacgttcttcttcagagagagtggaccagcagagctcagagtcccccagc
ggtccgtctgtccagcagcctcagacccagctggactccgtctttcagctgctggaggac
aacatcgtcatgtttgtgaaggacgagctgaagaagatccagaaggttctgagtccagat
tacccagaatccctagatcatctgttgcagggtgaggatgaagagcagaggaggagcagc
agagaggcgtttttgaagataacagtgaacttcctgaggagaatgaagcaggaggagctg
gctgagcgtctgcagagaagttcttttgctgcagtttgtaaaaagcggctgaagtctaag
ctgaagaagaagtcccagtgtgtgtttgaggggattgttaaagcaggaaacccaaccctt
ctggagcagatctacacagagctctacatcacagagggagggaccggagaggtcaacgat
gaacatgaagtcagacagattgaagcagcttccaggaaaccagacagagcagaaacagcc
atcagacaggaagacatctttaaactcccacctggaagaggaggacccatcagaacggtg
atgacgaagggagtggccggcatcgggaaaacagtcctaacacagaagttcactctggac
tgggctgaaggcagaaccaaccaggacatccagttactgcttccattcaccttcagacag
ctgaatgtgctgagagaggagaagttcagcttggtggaactagttcatggtttcttcagt
gaaaccaaaggaatctgcaactttgaaaaattccaggtcgtgttcatctttgacggtctg
gatgagagtcgacttcctctggacttccccaactctacaatcgtcagtgaccccagaagg
tccacctcagtggacgtgctgctgacaaacctcatcagggggaacctgcttccttctgct
cgtctctggatcaccacacggcccgcagcagccaatcagatccctcctgagtgtgttgac
atggtgacggaggtcagaggattcactgacccacagaaggaggaatacttcaggaagagg
tccagagatgaggagcagaccagcaagatcatctcccacatcaagacatcccggagcctc
cacatcatgtgctgcatcccagtcttctgctggatcactgctacggtcctggagaacgtc
ctggagaacgttctggaaaccagaaagggagggaagctgcccaagaccctgactgagatg
tacatccacttcctggtggtccaggccaaactgaagagggtcatgtatgacggaggagct
gggacggatccacactggagtccagagagcaggaagatgatcaagtctctgggaaaactg
gcttttgagcagctgcagaaaggaaacctgatcttctatgaaccagacctgagagagtgt
ggcatcgatgtcagagaggcttcagtgtactcaggagtgttcacccagatctttagagag
gagagcggcctgtaccaggaccatgtcttctgcttcatccatctgagtgtccaggagttt
ctggctgctcttcatgtccatcagaccttcatcagctctggagtcaacctgctggaggaa
caaaagaacatcttctggtggtttaaaaaaagagctgtgactaagctccatcagagtgct
gtggacaaggccttacagagtccaaacggacacctggacttgttcctgcgcttcctcctg
ggtctttcactggagaccaatcagattctcctacgaggtctgctggaaccaaaacaaaga
agatcacagaacaatcaggaaacagttaaatacataaaggagaagatcaatgatcgggat
ctgcctgcagagagaagcatcaacctgttccactgtctgaatgaactgaacgatggttct
ctggtggaggaggtccaagagtccctgaagtttgaacgactctccacagaaaaactgtct
catgctcagtggtcggctctggtcttcatcctactgtcatcagaagaagatctggaggtg
tttgacctgaagaaatactcagcttcagaggaggttctacggaggctgctgccggtggtc
aaagcctccaagaaagctgtgttgagtggttgtaacctctcagaggacatctgtccactt
ctgtcctcagttctcagctctcagtcctccagtctgacagaattggaccttagctacaac
cacctgcatgattcaggactggagaatctgtgtcctggactggagagtccacactgtaaa
ctggagtctctcaggttgagtggctgtagcctctcagggagcatctgtccacttctgtcc
tcggttctcagctctcagtcctccagtctgacagaactggacctgagtaacaacgacctg
caggattctggactgaagcagctgtgtcctggactggagagtccacactgtcacctggag
tctctcaggttgtcaggctgtctgatctcagaggaaggaagtgcttctctggtctcagct
ctgacctccaacccctcccacctgagagagctggacctgagctacaaccatccaggagag
tcagcagggaagcttctgtctagactggaggatccccgctggagactgcacactctcagg
gtgcagcctgctggacaacaatggctgacaccaggtctgaggaagtataagtgggcctca
agcagtttggagcctgagggtcatgcaagtgttacggagaaatccagcatctggactaaa
gtggagccagaagtgaacgacacagctgcaggcgaggctacgacttatagactccagtct
gcagcaggacactttgagtgcagcgtctctggtttgcgatgggtttgtaaggagggggtc
ggcttgaagtaccagtttcgttcttgggagggacacatggagaggatgaagagcagacaa
tactcacctgccggtcccctcatggacgtcacgctcatcactgggaagataaatgaggtg
ctcctgccacactgggtctgtatagatgacattcccaacttattagagaattttaaagtg
ctacacataaatgagagtggggaagttctggagacggcctctgaggtcacaccatcacac
gtcaggttaatggaaccggacttctcgttgtttgcggtcctggtcagctacttctttcgt
aggaaagtcagctctgacatgttgatatactaccaaccccacgcaacgttcctcaagctc
cgcctctatctgattccacatgatcctggtctccaagaggcagtaaacaagagcgaatcc
ttaaatagatttgaaagaatcaaaaagcatcgaccagacgagtacctggagatggatcag
ggcttcagcctcaacgctactgtggacactgtgagagtccaaccagagaaaataactctg
aggtacgacagtcaagacccaaactgctatgaagtgtacatggagaatccagacagacaa
ttcagccttgagcttcgaaaaaaatcctcaccaaacgatcacccggtctggatctgtgaa
ttttgggaaagtgactatccaaagtctggaccttccaatgaagccactagtgtcagaact
gcagctcatggtgcagcaggaccaggaggaccagcggatgcacctagtgaaactgaatca
gcaaatatggagcaaaaaaccccgaaaaagattttgaaagactccctgatgaatctttct
gaggaaaacttcaaggagttttgccacgcactcctggaccgcaaggagaagccgcacatc
tttcgcatgaaggtggaggggaaaagccgcctggagatcgcagatgtgatgataagcact
ttcacggatcagggagctctgaaggtggcagaggagatcctaagagagattggctgcact
aaggctgcgaacaaactcactaaagagggaggtgcagcaggaccagcaagaccaggagga
ccaggaggaccagcgggaccagcgggttcacccaaggaagaacttggtccagagtgggcg
aagaggtctccacgttga
DBGET
integrated database retrieval system
