Cololabis saira (Pacific saury): 133452317
Help
Entry
133452317 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 5-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133452317
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133452317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
AFG1_ATPase
CFAP143
Motif
Other DBs
NCBI-GeneID:
133452317
NCBI-ProteinID:
XP_061587542
LinkDB
All DBs
Position
10:5464885..5668832
Genome browser
AA seq
1218 aa
AA seq
DB search
MDQCEDREDGVPPSKTSLCGEHESGSKDQRNQPGPGPGPGPGPGPGPGPGPGPGPGPGPG
PGPGPGPGPGPGSGPGSGPGSGPGSGPGPSCVSLKSDKSKDFYFNFKGEQHSAVKRVHQK
GNSLEHEPSCLSLKSNRSNDLFINFKGDQQSSSERVDQQISESPSGPSVQQHQTQLDSIF
QLLEDNIVMFVKNELKKIQKVLSPDYPESLDHLLQGEDEEQRRSREAFVKITVNFLRTMK
QEELAEHLQSNVSAAVCKKRLKSKLKKKSQCVFEGIVKAGNPTLLEQIYTELYITEGGTG
EVNDEHEVRQIEAASRKPDRAETTIRQEDIFKLPPGRDEPIRTVMTKGVAGIGKTVLTQK
FSLDWAEGRTNQDIQFLLPFTFRELNVLKERKFSLVELVHHFFTETREMCSFEEFQVVLI
FDGLDESRLPLDFHNNEVLTDVTESTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPP
ECVSMVTEVRGFTDPQKEDYFRKRFREEEQTSRIISHIKTSRSLQIMCHIPVFCWITATV
LEKVLETREGGKLPKTLTEMYIHFLVVQAKLKKVKYDGGAETDPHWSPESRKMVESLGKL
AFEQLQKGNLIFYESDLRECGIDVREASVYSGVFTQIFREESRLYQDQVFCFIHLSVQEF
LAALHVHQTLINSGVNLLEEQATSHTSETREVQEEYKDEETRFYQTAVDKALQSPNGHLD
LFLRFLLGFSLETNQTLLRGLLEPEQRRSQNNQETVEYIKKKISEDLSAERSINLFHCLN
ELNAGSLVEEVQWSLRSGLLFTAKLSPAQWSALVFILLSSEDLEVFDLKKFSASEEVLRR
LLPVVKASKKVVLSDCNLSENICADLSSVLSSQSSSLTELDLSNNDLQDSGLEQLCPGLE
SPHCHLESLRLRDCNLSEDICPLLSSVLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESP
HCHLESLRLSGCLISEEGSTSLVSALSSNPSHLRELDLSYNHPGKSAGKLLSKLEDPRWR
LDTLRVEPAGQRFLTPGPWKYSCQLTIDTNTVNNYIKLSDDNRKMMFVDAYQSYPNHPDR
FDFWDQLLCREVLMGRCYWEIQWRGDVYISVSYRRISRKGNSGDYGFRRKNNSWSLECSD
DGRYRVWHNNRTTSSSSSPVSDRVAVYVDVPAGTLSFYSVSSDRLILLHTFNTTFTEPLY
PGFGFWLNPDSGSSVTLC
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacagagaggatggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtgggagcaaagatcagaggaatcaacctggacctggacctggacctgga
cctggacctggacctggacctggacctggacctggacctggacctggacctggacctgga
cctggacctggacctggacctggacctggacctggatccggacctggatccggacctgga
tccggacctggatccggacccggacccagctgtgtgtccttgaagagcgacaagtcaaag
gacttttattttaacttcaaaggagagcaacattctgctgtaaagagggtccatcagaaa
ggaaactctctggaacatgaacccagctgtttgtccttgaagagcaaccggtcaaatgac
ttgtttattaactttaaaggagaccaacaatcttcttcagagagagtggaccagcagatc
tcagagtcccctagtggtccgtctgtccagcagcatcagacacagctggactccatcttt
cagcttctggaggacaacattgtcatgtttgtgaagaacgagctgaagaagatccagaag
gttctgagtccagattacccagaatccctagatcatctgttgcagggtgaggatgaagag
cagagaaggagcagagaggcgtttgtgaagatcacagtgaacttcctgaggacaatgaag
caggaggagctggctgagcatctgcagagcaatgtttctgctgcagtttgtaaaaagcgg
ctgaagtctaagctgaagaagaagtcccagtgtgtgtttgaggggattgttaaagcagga
aacccaacccttctggagcagatctacacggagctctacatcacagagggagggactgga
gaggtcaacgatgaacatgaagtcagacagattgaagcagcttccaggaaaccagacaga
gcagaaacaaccatcagacaggaagacatctttaaactcccacctggaagagatgaacca
atcagaacagtgatgacgaagggagtggccggcatcgggaaaacagtcctaacacagaag
ttcagtctggactgggctgaaggcagaaccaaccaggacatccagttcctgcttccattc
accttcagagagctgaatgtgctgaaagagagaaagttcagcttggtggaacttgttcat
cacttcttcactgaaaccagagaaatgtgcagctttgaagagttccaggtcgtgttaatc
tttgacggtctggatgagagtcgacttcctctggacttccacaacaatgaggtcctgact
gatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaacctg
cttccttctgctcgtctctggatcaccacacgacccgcagcagccaatcagatccctcct
gagtgtgtctccatggtgacggaggtcagagggttcactgacccacagaaggaggactac
ttcaggaagaggttcagagaagaggagcagaccagcaggatcatctcccacatcaagaca
tcacggagcctccaaatcatgtgccacatcccagtcttctgctggatcactgctacggtc
ctggagaaagtcctggaaaccagagagggagggaagctgcccaagaccctgactgagatg
tacatccacttcctggtggtccaggccaaactgaagaaagtcaagtatgacggaggagct
gagacggatccacactggagtccagagagcaggaagatggtggagtctctgggaaaactg
gcttttgagcagctgcagaaaggaaacctgatcttctatgaatcagatctgagagagtgt
ggcatcgatgtcagagaggcttcagtgtactcaggagtgttcacccagatctttagagag
gagagcaggctgtaccaggaccaggtcttctgcttcatccacctgagtgtccaggagttt
ctggctgctcttcatgtccatcagaccttgatcaactctggagtcaacctgctggaggaa
caggcaacctctcacacatctgaaacacgagaagttcaggaagagtataaagatgaagag
actcgcttctatcagacagctgtggacaaggccttacagagtcccaacggacacctggac
ttgttccttcgcttcctcctgggtttttcactggagaccaatcagactctcctacgaggt
ctgttggaaccagaacaaagaagatcacagaacaatcaggaaacagttgaatacatcaag
aagaagatcagtgaggatctgtctgcagagagaagcatcaacctgttccactgtctgaat
gaactgaacgctggttctctggtggaggaggtccaatggtccctgaggtcaggacttctc
ttcacagctaaactgtctcctgctcagtggtcggctctagtcttcatcttactgtcatca
gaagatctggaggtgtttgacctgaagaagttctcagcttcagaggaggttctacggagg
ctgctgccggtggtcaaagcctccaagaaagttgtactgagtgactgtaacctctcagag
aacatctgtgcagatctgtcctcagttctcagctctcagtcctccagtctgacagaactg
gacctgagtaacaacgacctgcaggattcaggactggagcagctgtgtcctggactggag
agtccacactgtcacctggagtctctcaggttgagggactgtaacctctcagaggacatc
tgtccacttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctg
agtaacaaccacctgcaggattcaggactgaagaagctgtgtcctggactggagagtcca
cactgtcacctggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagtact
tctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctac
aaccatccaggaaagtcagcagggaagcttctgtctaaactggaggatccccgctggaga
ctggacactctcagggtggagcctgctggacaacgatttctgacaccaggtccgtggaag
tattcctgtcaactcaccatcgacacaaacacagtaaacaactacataaaactgtctgat
gacaacaggaagatgatgtttgtggatgcgtatcagtcatatcctaatcatccagacagg
tttgatttctgggatcagctgctgtgtagagaagttctgatgggtcgctgttactgggag
atccagtggagaggagatgtttatatatcagtgagttacagaagaatcagcaggaaagga
aactctggtgactatgggtttagacggaagaataattcctggagtctggaatgttctgat
gatggtcggtaccgtgtctggcacaataacagaacaacttcctcctcctcttccccagtc
tctgacagagtagcagtgtacgtggacgttcctgctggaactctgtccttctacagcgtc
tcctctgacagactgatcctcctccacaccttcaacaccacattcactgaacctctctat
cctggattcgggttctggttaaatcctgattctggttcttcagtgactctgtgttga
DBGET
integrated database retrieval system
