Cololabis saira (Pacific saury): 133452318
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Entry
133452318 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133452318
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133452318
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
LRR_1
AFG1_ATPase
Trypan_PARP
CFAP143
Cep192_D3
TrAA12
Motif
Other DBs
NCBI-GeneID:
133452318
NCBI-ProteinID:
XP_061587544
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All DBs
Position
10:4615383..4629531
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AA seq
1212 aa
AA seq
DB search
MDQCEDGEDGVPPSKTSLCGEHESRSKAQRNRPGPGPGPGPGPGPGPGSGPGPGPGPGPG
PGPGPGPGPGPGPGPGPGPGPEAETDHEPSCVSLKSDQSKNIIIEFKGDQGPAGKRVQEK
RDSLVDEPSCVSLKSNQSKNIIIEFKGDQQSSSERVDQQISESPSGPSVQQHQTQLDSVF
QLLEDNFVMFVKDELKKIQRVLSPDYPESLDLLEGEDEEQKSSSREAFVKITVNFLRRMK
QEELAERLQSNVSAAVCKKRLKSKLKKKCQCVSEGIVKAGNPTLLKQIYTELYITEGGTG
HVNDEHEVRQIEAASRKPHRAETAIRQEDIFKVPPGRDEPIRMVMTKGVAGIGKTVLTQK
FTLDWAEGRTNQDIQFLLPFTFRELNVLKERKFSLVELVHHFFSETKGICSFEEFQVVFI
LDGLDESRLSLDFHKNEDLTDVTEPTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPP
KCVDLVTEVRGFTDPQKEDYFRKRFRDEEQTSRIIYHIKTSRSLHIMCHIPVFCWITATV
LENVLEKVLETRKGGELPKTLTEMYIHFLVVQAKLKKLKYDGGAETDPHWSPESRKMVES
LGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFTQIFREESGLYQDQVFCFIHLS
VQEFLAALHVHQTFISSGVNLLEEQKNTSWWFKKRPETDLYQSAVDKALQSPNGHLDLFL
RFLLGLSLETNQTLLRGLLEPQQRRSQNKQETVEYIKKKISEDLSAERSINLFHCLNELN
DRSLVEEVQRSLRSGRLSTDKLSPAQWSALVFILLSSGDLEVFDLKKFRASEEVLRRLLP
VVKASKKVVLSGCNLSGNICPLLSSVLSSQSSSLTELDLSNNHLQDSGLKNLCPGLESPH
CHLESLRLIDCNLSEDICPLLSSVLSSQSSSLTELDLSNNHLQDSGLKKLCPGLESPHCH
LESLRLSGCLISEEGSSSLVSALNSNHSHLRELDLSYNHPGESAGKLLSRLEDARWRLDT
LRVEPAGQRWLTPGLRKYSCQLTVDTNTVNNCIQLSDDNRKMMCVEEYQSYPDHPDRFDS
WYQLLCREVLTGRCYWEVQRTGGVSVSVSYRRISRKGNSDDCVFGRNDHSWKLFCSDDGR
YRVRHNNRGTPSSSSFSVSGRVAVYVDVPAGTLSFYSVSSDRLILLHTFNTTFIEPLCPG
FGFNPGSSVSLC
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacggagaggacggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcgacctggacctggacctggacctgga
cctggaccgggacctggacctggatctggacctggacctggacctggacctggacctgga
cctggacctggacctggacctggacccggacccggacccggacccggacccggacctgga
cctgaagctgaaactgatcatgaacccagctgtgtgtccttgaagagtgaccagtcaaag
aacattattattgagtttaaaggagaccaaggtcctgctggaaagagggtccaagagaaa
agagactctcttgtagatgaacccagctgtgtgtccttgaagagtaaccagtcaaagaac
attattattgagtttaaaggagaccaacagtcttcttcagagagagtggaccagcagatc
tcagagtcccccagcggtccgtctgtccagcagcatcagacccagctggactccgtcttt
cagctgctggaggacaactttgtcatgtttgtgaaggacgaactgaagaagatccagagg
gttctgagtccagattacccagaatccctagatctgttggagggtgaggatgaagaacag
aagagcagcagcagagaggcgtttgtgaagatcacagtgaacttcctgaggagaatgaag
caggaggagctggctgagcgtctgcagagcaatgtttctgctgcagtttgtaaaaagcgg
ctgaagtctaagctgaagaagaagtgccagtgtgtgtctgaggggattgttaaagcagga
aacccaacccttctgaagcagatctacacggagctctacatcacagagggagggactgga
cacgtcaacgatgaacatgaagtcagacagattgaagcagcttcaaggaaaccacacaga
gcagaaacagccatcagacaggaagacatctttaaagtcccacctggaagagatgaacca
atcagaatggtgatgacgaagggagtggccggcatcgggaaaacagtcctaacacagaag
ttcactctggactgggctgaaggcagaaccaaccaggacatccagttcctgcttccattc
accttcagagagctgaatgtgctgaaagagagaaagttcagcttggtggaacttgttcat
cacttcttcagtgaaaccaaaggaatctgcagctttgaagagttccaggtcgtgttcatc
cttgacggtctggatgagagtcgactttctctggacttccacaaaaatgaggacctgact
gatgttacagagcccacctcagtggatgtgctgctgacaaacctcatccgggggaacctg
cttccttctgctcgtctctggatcaccacacgacccgcagcagccaatcagatccctcct
aagtgtgttgacctggtgacagaagtcagagggttcactgacccacagaaggaggactac
ttcaggaagaggttcagagatgaggagcagaccagcaggatcatctaccacatcaagaca
tcacggagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacggtc
ctggagaacgttctggagaaagtcctggaaaccagaaagggaggggagctgcccaagacc
ctgactgagatgtacatccacttcctggtggtccaggccaaactgaagaagctcaagtat
gatggaggagctgagacggatccacactggagtccagagagcaggaagatggtggagtct
ctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaaccagac
ctgagagagtgtggcatcgatgtcagagaggcttcagtgtactcaggagtgttcacccag
atctttagagaggagagcggcctgtatcaggaccaggtcttctgcttcatccatctgagt
gttcaggagtttctggctgctcttcatgtccatcagaccttcatcagctctggagtcaac
ttgctggaggaacaaaagaatacttcctggtggtttaaaaaaagaccagagactgacctc
tatcagagtgctgtggacaaggccttacagagtccaaacggacacctggacttgttcctc
cgtttcctcctgggtctttcactggagaccaatcagactctcctacgaggtctgttggaa
ccacaacaaagaagatcacagaacaagcaggaaacagttgaatacatcaagaagaagatc
agtgaggatctgtctgcagagagaagcatcaacctgttccactgtctgaatgaactgaac
gatcgttctctggtggaggaggtccaacggtccctgaggtctggacgtctctccacagat
aaactgtctcctgctcagtggtcggctctggtcttcattttactgtcatcaggagatctg
gaggtgtttgacctgaagaagttccgagcttcagaggaggttctacggaggctgctgccg
gtggtcaaagcctccaagaaagttgtgttgagtggttgtaacctctcagggaacatctgt
ccacttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctgagt
aacaaccacctgcaggattcaggactgaagaatctgtgtcctggactggagagtccacac
tgtcacctggagtctctcaggttgattgactgtaacctctcagaggacatctgtccactt
ctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctgagtaacaac
cacctgcaggattctggactgaagaagctgtgtcctggactggagagtccacactgtcac
ctggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagttcttctctggtc
tcagctctgaactccaaccactcccacctgagagagctggacctgagctacaaccatcca
ggagagtcagcagggaagcttctgtctagactggaggatgcccgctggagactggacact
ctcagggtggagcctgctggacaacgatggttgacaccaggcctgaggaagtattcctgt
caactcaccgtcgacacaaacacagtcaacaactgcatccaactgtctgacgacaacagg
aagatgatgtgtgtggaggaatatcagtcatatcctgatcatccagacaggtttgattcc
tggtaccagctgctgtgtagagaagttctgacgggtcgctgttactgggaggtccagagg
acaggaggagtttctgtatcagtgagttacagaagaatcagcaggaaaggaaactctgat
gactgtgtgtttggaaggaacgatcattcctggaaactgttctgttctgatgatggtcgg
taccgtgtccgtcacaataacagaggaacaccttcctcctcctctttctcagtctctggc
agagtagcagtgtacgtggacgttcctgctggaactctgtccttctacagcgtctcctct
gacagactgatcctcctccacaccttcaacaccacattcattgaacctctctgtcctggg
ttcgggttcaatcctggttcttcagtgtctctgtgttga
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integrated database retrieval system
