Cololabis saira (Pacific saury): 133452361
Help
Entry
133452361 CDS
T09849
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133452361 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133452361 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Death
Motif
Other DBs
NCBI-GeneID:
133452361
NCBI-ProteinID:
XP_061587599
LinkDB
All DBs
Position
10:complement(6881369..6965369)
Genome browser
AA seq
1601 aa
AA seq
DB search
MVLTRTLVRTLIRTLAACTCLAACASAAMDECGDERGSAQRCMPEFVNAAFNATVRASNT
CGSPPEEYCVQTGATGVTKSCHICDDRQGPHRHGPAFLTDYNNQQDATWWQSQSMLAGVQ
YPGSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEAGPWVPYQYYSGSCEKTYQK
QNHGFIRTGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATD
IRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVRDNGGRLVCNCK
HDTEGVDCGVCKPFYNDRPWRRATADNANECLACDCNGRSQECEFDAELYRATGRGGRCR
GCSGNTDGPHCERCLDQFYRDQEGGPCRACSCSPVGSESPQCDSRGVCPCKPGVTGEKCD
RCQPGFHSLTEAGCRPCSCSPSGSTQECDVGSGQCRCKDNVEGFSCDRCKLGYFNLDPHN
PQGCTPCFCFQHSSVCASAEGFSVTTVSSAFDRGDEQWTGQQRDGSPVPVQWSPAGRELS
LVSEDYLPMYFVAPEKFLGNQMLSYGQNLSLDFRVERRDTRLSAEDLILEGAGLRLSVPL
IAQGNAYPNENKQTYVFRLHDSTDYPWRPAISHADFQKLLHNLTAIKIRGTYSERSAGYL
DDVSLVTARRGPGEPARWVEQCTCPQGYQGQHCEQCTLGYRRAQPELGAFSTCEPCNCNG
HSDACQPNTGACDCQHHTAGLSCERCQDGFYGDATQGTSSDCQPCPCPAGATCAVVPSTR
EVVCTNCPAGTTGKRCELCDDGFFGDPLGQNGPVRTCRACKCSDNIDPNAVGNCNRETGE
CLKCIYNTAGFFCDRCKDGFYGNALAANPAEKCRPCACSPLGTQGQQSGCSQGTGQCPCL
PNVAERDCSACQPGFFNLRSGTGCERCNCNAIGSTNGQCDITTGQCECQPGVAGLQCQRC
EVNFFGFGSSGCKPCDCDPEGSQAGQCRDDGRCECRPGFVGARCDMCEENYFYNRSAPGC
QQCPSCYGLVRDKVNQQRQKLHEIQTLLDNLGSGQDTVTDEAFEARLKEAEKAIMDLLDE
AKASKDVDRGLLDRLGAINNTLTTQWNRLQSIRTTVDDTGAKADQARNRVRDAESLIDRA
RQELDKAKDAVGKVDIKAPGGTGEPNNMTLLAEEARRLADKHKMDADQIEKIAKDANDTS
TKAYNLLLKTLDGEGKTSQELDELNKKYNEAKDLGKNLEKQANKVKAEAEEAGNKALQIF
ANLTSLPPVDTKALQDEADKIRKEASDLDKLIDKTEKEYGDLRDDLKPKELEVRKLLEKG
KSEQQTADQLLARADAAKALAEEAASKGRSTFREAESILDNLRDFDRRVNDNKTAAEEAL
KMIPAINATIRAAVEKTRQAEAALGNAAADARDAKDKAQQAEKIATDVQKGSARTKEEAE
KALQNTTKLEQEVNDMMGQLSAAEAELQKKKLEADNDMMMAGMASDSAKEAEDNARKAKN
TVKTVLKLITSLMDQLGNIDKVDLSKLNEIEESLRRAKGSMAAGELDRKLAELTDVATTQ
DEMIRDYDSQIKEIRADIANLVDIKNTLPEGCFNTPSLERP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggttctgacccggactctggtccggactctgatccggaccctggccgcgtgcacgtgc
ctggctgcgtgcgcgtccgccgccatggacgagtgcggggacgagcgcgggagcgcgcag
cgctgcatgccggagttcgtgaacgcggcgttcaacgccacggtgcgggccagcaacacc
tgcgggtccccgcccgaggagtactgcgtccagaccggggccaccggcgtcaccaagtcc
tgccacatctgcgacgaccgccagggcccgcaccggcacgggcccgccttcctcaccgac
tacaacaaccagcaggacgccacctggtggcagagccagagcatgctggccggggtgcag
tacccgggatccattaacctgacgctgcacctgggtaaggccttcgacatcacctacgtg
cggctcaagttccacaccagccggcccgagagcttcgccatctacaagcgcaccagcgag
gcggggccctgggtgccgtaccagtactacagcggctcctgcgagaagacctaccagaag
cagaaccacggcttcatccgcaccggcgaggacgagcagcaggcgctctgcaccgacgac
ttcagcgacatctcgccgctcaccggcggcaacgtggccttcagcacgctggagggccgg
cccagcgcctacaacttcgacaacagcccggtgctgcaggactgggtgacggccaccgac
atcagggtgaccctgaacaggctcaacaccttcggggacgaggtcttcaacgaccccaag
gtcctcaagtcctactactacgccatctccgacttcgccgtggggggaaggtgcaagtgt
aacggccatgctagcgagtgcgtgcgggacaacgggggacggctggtctgcaactgcaaa
cacgacacggagggcgtcgactgcggcgtctgcaaaccgttctacaacgaccggccctgg
cgccgcgccacggccgacaacgctaacgagtgtctggcctgtgactgtaacggccggagt
caggagtgtgagtttgatgccgagctctaccgggccacgggccgcggcggccgctgccgc
ggttgctccggcaacacggacgggccgcactgtgagcgctgcctggaccagttctaccgg
gaccaggagggcgggccctgccgggcctgcagctgcagccccgtcggatccgagtctccc
cagtgtgacagcagaggtgtgtgtccctgtaaacccggagtgaccggagagaagtgcgac
cgctgccagccgggattccacagtctgacggaggccggctgcagaccctgctcctgctcc
ccctccggcagcacccaggagtgtgacgtgggctcgggtcagtgccgctgcaaggacaac
gtggagggtttcagctgcgacaggtgcaagctgggatacttcaacctggacccccacaac
ccgcagggctgcaccccctgcttctgcttccagcactcgtccgtctgcgccagcgccgag
ggcttcagcgtgacgaccgtcagctccgccttcgaccgaggggacgagcagtggacgggc
cagcagagggacgggtcccccgtcccggtccagtggtcccccgccggccgggaactgtcc
ctggtctccgaggattacctgcccatgtacttcgtagctccagagaagttcctggggaac
cagatgttgagctacgggcagaacctgagcctggacttccgggtggagcgtcgggacacc
cggctgtcggccgaggacctgatcctggagggggccgggctgcgtctgtcggtgccgctc
atcgcccagggcaacgcctaccccaacgagaacaagcagacctacgtgttcaggctccac
gacagcaccgactacccctggagaccggccatcagccacgccgacttccagaagctgctg
cacaacctgacggccataaagatccggggcacctacagcgagaggagtgccggctacctg
gacgacgtgtccctggtgacggcccggaggggccccggggagccggcccgctgggtggag
cagtgcacctgcccccagggctaccagggccagcactgtgagcagtgcaccctgggatac
cgccgcgcgcagcccgagctcggggccttcagcacctgtgagccgtgtaactgcaacgga
cacagcgacgcctgccagcccaacaccggagcctgtgactgccagcatcacaccgccggc
ctgagctgcgagcgctgccaggacggtttctacggcgacgccacgcagggcacgtcgtcg
gactgccagccgtgtccctgcccggccggagccacgtgtgccgtcgtccccagcaccagg
gaggtggtgtgcaccaactgccccgccgggaccacagggaagcgctgcgagctctgcgac
gacggcttcttcggcgacccgctgggccagaacgggccggtccggacctgccgcgcctgc
aagtgcagcgacaacatcgaccccaacgccgtcggcaactgcaaccgcgagacgggcgag
tgcctcaagtgcatctacaacaccgccggcttcttctgcgaccgctgcaaggacggtttc
tacggcaacgccctggccgccaaccccgccgagaagtgccggccgtgcgcctgctctccg
ctcggcacccagggtcagcagagcggctgctcccagggcaccggccagtgcccgtgtctg
cccaacgtggcggagcgcgactgcagcgcctgccagcccggattcttcaacctgcggagc
ggcaccggctgcgagcggtgcaactgcaacgccatcggctccaccaacggccagtgtgac
atcaccacggggcagtgcgagtgccagcccggcgtcgccggcctgcagtgccagcgctgc
gaggtcaacttcttcggcttcggctcgtcgggatgcaaaccctgcgactgcgacccggaa
ggctcccaggcgggtcagtgccgggacgacggccgctgcgagtgccggcccggcttcgtc
ggcgcccgctgcgacatgtgcgaggagaactacttctacaaccgctcggcgccgggatgc
cagcagtgcccgtcctgctacgggctcgtccgggacaaggtgaaccagcagaggcagaaa
cttcacgagatccagaccctgctcgacaacctgggctcgggtcaggacaccgtcaccgac
gaggccttcgaggcccggctcaaggaggccgagaaggccatcatggacctgctggacgag
gccaaggccagcaaagatgtggaccggggcctgctggaccgcctgggcgccatcaacaac
accctgacgacgcagtggaaccgcctgcagagcatccggaccacggtggacgacaccggc
gccaaggccgaccaggcccgcaaccgggtccgggacgccgagagcctgatcgaccgagcg
cggcaggagctggacaaggccaaggacgccgtcggtaaagtggacatcaaggcgcccggc
ggaaccggagaacccaacaacatgacgctgctggcggaggaggcccggcggctcgccgac
aagcacaagatggacgccgaccagatcgagaagatcgccaaggacgccaacgacacgtcc
accaaggcctacaacctgctgctgaagacgctggacggggaggggaagacgagccaggag
ctggacgagctcaacaagaagtacaacgaggcgaaggacctgggcaagaacctggagaaa
caggccaacaaggtgaaggcggaggccgaggaggccgggaacaaggcgctgcagatcttc
gccaacctcaccagcctgccgccggtcgacaccaaggccctgcaggacgaagcggacaag
atccggaaggaggcgtcggacctggacaagctgatcgacaagacggagaaggagtacgga
gacctgagggacgacctgaagcccaaggagctggaggtgcggaagctgctggagaagggc
aagagcgagcagcagacggccgaccagctgctggcgcgagccgacgccgccaaggcgcta
gccgaagaggcggctagcaagggccgctccaccttcagggaggcggagagcatcctggac
aacctcagagacttcgaccggagggtcaacgacaacaagactgcggcggaggaggccctg
aagatgatccccgccatcaacgccaccatccgggcggcggtggagaagacccggcaggcg
gaggccgccctgggcaacgccgccgccgacgcccgcgacgccaaggacaaggcgcagcag
gccgagaagatcgccaccgacgtgcagaagggctcggccaggaccaaggaggaggcggag
aaggcgttgcagaacaccaccaagctggagcaggaggtcaacgacatgatgggtcagctg
agcgccgccgaggcggagctgcagaagaagaagctggaggccgacaacgacatgatgatg
gccggcatggcgtcggacagcgccaaggaggcggaggacaacgcccgcaaagccaagaac
acggtgaagacggtgctgaagctcatcacctcgctgatggaccagctgggaaacatcgac
aaggtggacctgagcaagctgaacgagatcgaggagtcgctgcggcgcgccaagggcagc
atggcggccggcgagctggacaggaagctggcggagctgacggacgtggcgaccacgcag
gacgagatgatccgcgactacgacagccagatcaaggagatccgcgccgacatcgccaac
ctggtggacatcaagaacacgctacccgaaggctgcttcaacacgccgtccctggagagg
ccctag
DBGET
integrated database retrieval system