KEGG   Cololabis saira (Pacific saury): 133452361
Entry
133452361         CDS       T09849                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04510  Focal adhesion
csai04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:csai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133452361 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133452361 (lamc1)
SSDB
Motif
Pfam: Laminin_N EGF_laminin Laminin_B EGF_LMN_ATRN Death
Other DBs
NCBI-GeneID: 133452361
NCBI-ProteinID: XP_061587599
LinkDB
Position
10:complement(6881369..6965369)
AA seq 1601 aa
MVLTRTLVRTLIRTLAACTCLAACASAAMDECGDERGSAQRCMPEFVNAAFNATVRASNT
CGSPPEEYCVQTGATGVTKSCHICDDRQGPHRHGPAFLTDYNNQQDATWWQSQSMLAGVQ
YPGSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEAGPWVPYQYYSGSCEKTYQK
QNHGFIRTGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATD
IRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVRDNGGRLVCNCK
HDTEGVDCGVCKPFYNDRPWRRATADNANECLACDCNGRSQECEFDAELYRATGRGGRCR
GCSGNTDGPHCERCLDQFYRDQEGGPCRACSCSPVGSESPQCDSRGVCPCKPGVTGEKCD
RCQPGFHSLTEAGCRPCSCSPSGSTQECDVGSGQCRCKDNVEGFSCDRCKLGYFNLDPHN
PQGCTPCFCFQHSSVCASAEGFSVTTVSSAFDRGDEQWTGQQRDGSPVPVQWSPAGRELS
LVSEDYLPMYFVAPEKFLGNQMLSYGQNLSLDFRVERRDTRLSAEDLILEGAGLRLSVPL
IAQGNAYPNENKQTYVFRLHDSTDYPWRPAISHADFQKLLHNLTAIKIRGTYSERSAGYL
DDVSLVTARRGPGEPARWVEQCTCPQGYQGQHCEQCTLGYRRAQPELGAFSTCEPCNCNG
HSDACQPNTGACDCQHHTAGLSCERCQDGFYGDATQGTSSDCQPCPCPAGATCAVVPSTR
EVVCTNCPAGTTGKRCELCDDGFFGDPLGQNGPVRTCRACKCSDNIDPNAVGNCNRETGE
CLKCIYNTAGFFCDRCKDGFYGNALAANPAEKCRPCACSPLGTQGQQSGCSQGTGQCPCL
PNVAERDCSACQPGFFNLRSGTGCERCNCNAIGSTNGQCDITTGQCECQPGVAGLQCQRC
EVNFFGFGSSGCKPCDCDPEGSQAGQCRDDGRCECRPGFVGARCDMCEENYFYNRSAPGC
QQCPSCYGLVRDKVNQQRQKLHEIQTLLDNLGSGQDTVTDEAFEARLKEAEKAIMDLLDE
AKASKDVDRGLLDRLGAINNTLTTQWNRLQSIRTTVDDTGAKADQARNRVRDAESLIDRA
RQELDKAKDAVGKVDIKAPGGTGEPNNMTLLAEEARRLADKHKMDADQIEKIAKDANDTS
TKAYNLLLKTLDGEGKTSQELDELNKKYNEAKDLGKNLEKQANKVKAEAEEAGNKALQIF
ANLTSLPPVDTKALQDEADKIRKEASDLDKLIDKTEKEYGDLRDDLKPKELEVRKLLEKG
KSEQQTADQLLARADAAKALAEEAASKGRSTFREAESILDNLRDFDRRVNDNKTAAEEAL
KMIPAINATIRAAVEKTRQAEAALGNAAADARDAKDKAQQAEKIATDVQKGSARTKEEAE
KALQNTTKLEQEVNDMMGQLSAAEAELQKKKLEADNDMMMAGMASDSAKEAEDNARKAKN
TVKTVLKLITSLMDQLGNIDKVDLSKLNEIEESLRRAKGSMAAGELDRKLAELTDVATTQ
DEMIRDYDSQIKEIRADIANLVDIKNTLPEGCFNTPSLERP
NT seq 4806 nt   +upstreamnt  +downstreamnt
atggttctgacccggactctggtccggactctgatccggaccctggccgcgtgcacgtgc
ctggctgcgtgcgcgtccgccgccatggacgagtgcggggacgagcgcgggagcgcgcag
cgctgcatgccggagttcgtgaacgcggcgttcaacgccacggtgcgggccagcaacacc
tgcgggtccccgcccgaggagtactgcgtccagaccggggccaccggcgtcaccaagtcc
tgccacatctgcgacgaccgccagggcccgcaccggcacgggcccgccttcctcaccgac
tacaacaaccagcaggacgccacctggtggcagagccagagcatgctggccggggtgcag
tacccgggatccattaacctgacgctgcacctgggtaaggccttcgacatcacctacgtg
cggctcaagttccacaccagccggcccgagagcttcgccatctacaagcgcaccagcgag
gcggggccctgggtgccgtaccagtactacagcggctcctgcgagaagacctaccagaag
cagaaccacggcttcatccgcaccggcgaggacgagcagcaggcgctctgcaccgacgac
ttcagcgacatctcgccgctcaccggcggcaacgtggccttcagcacgctggagggccgg
cccagcgcctacaacttcgacaacagcccggtgctgcaggactgggtgacggccaccgac
atcagggtgaccctgaacaggctcaacaccttcggggacgaggtcttcaacgaccccaag
gtcctcaagtcctactactacgccatctccgacttcgccgtggggggaaggtgcaagtgt
aacggccatgctagcgagtgcgtgcgggacaacgggggacggctggtctgcaactgcaaa
cacgacacggagggcgtcgactgcggcgtctgcaaaccgttctacaacgaccggccctgg
cgccgcgccacggccgacaacgctaacgagtgtctggcctgtgactgtaacggccggagt
caggagtgtgagtttgatgccgagctctaccgggccacgggccgcggcggccgctgccgc
ggttgctccggcaacacggacgggccgcactgtgagcgctgcctggaccagttctaccgg
gaccaggagggcgggccctgccgggcctgcagctgcagccccgtcggatccgagtctccc
cagtgtgacagcagaggtgtgtgtccctgtaaacccggagtgaccggagagaagtgcgac
cgctgccagccgggattccacagtctgacggaggccggctgcagaccctgctcctgctcc
ccctccggcagcacccaggagtgtgacgtgggctcgggtcagtgccgctgcaaggacaac
gtggagggtttcagctgcgacaggtgcaagctgggatacttcaacctggacccccacaac
ccgcagggctgcaccccctgcttctgcttccagcactcgtccgtctgcgccagcgccgag
ggcttcagcgtgacgaccgtcagctccgccttcgaccgaggggacgagcagtggacgggc
cagcagagggacgggtcccccgtcccggtccagtggtcccccgccggccgggaactgtcc
ctggtctccgaggattacctgcccatgtacttcgtagctccagagaagttcctggggaac
cagatgttgagctacgggcagaacctgagcctggacttccgggtggagcgtcgggacacc
cggctgtcggccgaggacctgatcctggagggggccgggctgcgtctgtcggtgccgctc
atcgcccagggcaacgcctaccccaacgagaacaagcagacctacgtgttcaggctccac
gacagcaccgactacccctggagaccggccatcagccacgccgacttccagaagctgctg
cacaacctgacggccataaagatccggggcacctacagcgagaggagtgccggctacctg
gacgacgtgtccctggtgacggcccggaggggccccggggagccggcccgctgggtggag
cagtgcacctgcccccagggctaccagggccagcactgtgagcagtgcaccctgggatac
cgccgcgcgcagcccgagctcggggccttcagcacctgtgagccgtgtaactgcaacgga
cacagcgacgcctgccagcccaacaccggagcctgtgactgccagcatcacaccgccggc
ctgagctgcgagcgctgccaggacggtttctacggcgacgccacgcagggcacgtcgtcg
gactgccagccgtgtccctgcccggccggagccacgtgtgccgtcgtccccagcaccagg
gaggtggtgtgcaccaactgccccgccgggaccacagggaagcgctgcgagctctgcgac
gacggcttcttcggcgacccgctgggccagaacgggccggtccggacctgccgcgcctgc
aagtgcagcgacaacatcgaccccaacgccgtcggcaactgcaaccgcgagacgggcgag
tgcctcaagtgcatctacaacaccgccggcttcttctgcgaccgctgcaaggacggtttc
tacggcaacgccctggccgccaaccccgccgagaagtgccggccgtgcgcctgctctccg
ctcggcacccagggtcagcagagcggctgctcccagggcaccggccagtgcccgtgtctg
cccaacgtggcggagcgcgactgcagcgcctgccagcccggattcttcaacctgcggagc
ggcaccggctgcgagcggtgcaactgcaacgccatcggctccaccaacggccagtgtgac
atcaccacggggcagtgcgagtgccagcccggcgtcgccggcctgcagtgccagcgctgc
gaggtcaacttcttcggcttcggctcgtcgggatgcaaaccctgcgactgcgacccggaa
ggctcccaggcgggtcagtgccgggacgacggccgctgcgagtgccggcccggcttcgtc
ggcgcccgctgcgacatgtgcgaggagaactacttctacaaccgctcggcgccgggatgc
cagcagtgcccgtcctgctacgggctcgtccgggacaaggtgaaccagcagaggcagaaa
cttcacgagatccagaccctgctcgacaacctgggctcgggtcaggacaccgtcaccgac
gaggccttcgaggcccggctcaaggaggccgagaaggccatcatggacctgctggacgag
gccaaggccagcaaagatgtggaccggggcctgctggaccgcctgggcgccatcaacaac
accctgacgacgcagtggaaccgcctgcagagcatccggaccacggtggacgacaccggc
gccaaggccgaccaggcccgcaaccgggtccgggacgccgagagcctgatcgaccgagcg
cggcaggagctggacaaggccaaggacgccgtcggtaaagtggacatcaaggcgcccggc
ggaaccggagaacccaacaacatgacgctgctggcggaggaggcccggcggctcgccgac
aagcacaagatggacgccgaccagatcgagaagatcgccaaggacgccaacgacacgtcc
accaaggcctacaacctgctgctgaagacgctggacggggaggggaagacgagccaggag
ctggacgagctcaacaagaagtacaacgaggcgaaggacctgggcaagaacctggagaaa
caggccaacaaggtgaaggcggaggccgaggaggccgggaacaaggcgctgcagatcttc
gccaacctcaccagcctgccgccggtcgacaccaaggccctgcaggacgaagcggacaag
atccggaaggaggcgtcggacctggacaagctgatcgacaagacggagaaggagtacgga
gacctgagggacgacctgaagcccaaggagctggaggtgcggaagctgctggagaagggc
aagagcgagcagcagacggccgaccagctgctggcgcgagccgacgccgccaaggcgcta
gccgaagaggcggctagcaagggccgctccaccttcagggaggcggagagcatcctggac
aacctcagagacttcgaccggagggtcaacgacaacaagactgcggcggaggaggccctg
aagatgatccccgccatcaacgccaccatccgggcggcggtggagaagacccggcaggcg
gaggccgccctgggcaacgccgccgccgacgcccgcgacgccaaggacaaggcgcagcag
gccgagaagatcgccaccgacgtgcagaagggctcggccaggaccaaggaggaggcggag
aaggcgttgcagaacaccaccaagctggagcaggaggtcaacgacatgatgggtcagctg
agcgccgccgaggcggagctgcagaagaagaagctggaggccgacaacgacatgatgatg
gccggcatggcgtcggacagcgccaaggaggcggaggacaacgcccgcaaagccaagaac
acggtgaagacggtgctgaagctcatcacctcgctgatggaccagctgggaaacatcgac
aaggtggacctgagcaagctgaacgagatcgaggagtcgctgcggcgcgccaagggcagc
atggcggccggcgagctggacaggaagctggcggagctgacggacgtggcgaccacgcag
gacgagatgatccgcgactacgacagccagatcaaggagatccgcgccgacatcgccaac
ctggtggacatcaagaacacgctacccgaaggctgcttcaacacgccgtccctggagagg
ccctag

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