Cololabis saira (Pacific saury): 133452437
Help
Entry
133452437 CDS
T09849
Symbol
dcaf8
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133452437 (dcaf8)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133452437 (dcaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
133452437
NCBI-ProteinID:
XP_061587723
LinkDB
All DBs
Position
10:complement(13159813..13177079)
Genome browser
AA seq
619 aa
AA seq
DB search
MAEAAGKSPVLNGGSDEKEPGEDQHKDGDASGSKEGPTQSSSQDAPKETLDASGDKTTAD
AEGEPGANREGEEDEDTDSMEGSGLYYLNEDGEWEREAGRQEKAGEKVGGKRAARKRNRL
GGSNHSSSSDDDDDDKEDDGDGHKEDDDDDDDDDDDDEAMEAWLKAEVRDLRGPVWQAVP
SLRSREIGKESIQFVRRVCGARGLVQRLELQGRLERHTGCVNTLHFNPSGTRLASGSDDL
RVVIWNWAIRRAELEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQIRVAELSATQRCKN
TKRVAQHKGAAHKLALEPDSPCSFLSAGEDAVVFGIDLRLDRPANKLAVIKEGDKKVGLY
TIFVNPAKTHHFAVGGRDQYVRIYDQRKINENDNNGVLKKFCPSHLVSSESKTNITCLVY
SHDGTELLATYNDEDIYLFDSNHSDGADYRRRYKGHRNNATVKGVNFYGPSSEFVVSGSD
CGHIYLWDKYSARIVQFMEGDRGGVVNCLEPHPHLPGMATSGLDHDIKLWAPTAETPTGL
KGLKEVMKKNKRERDEDSVRHGDQYDTQLLWFLMRHMRNRRSPRSRREAADADTDESWSS
PDSSDEEEGGPDHVQCMSS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggctgctgggaaatccccggtgctgaacgggggctcggatgaaaaggagcct
ggagaagatcaacataaagacggggatgcctctggaagcaaagaagggccgacacagtct
tcctctcaagatgctcccaaagaaactttagatgcatctggagacaaaacgacggccgac
gcggaaggagagcccggggcaaacagagagggagaggaggacgaagacacagacagcatg
gagggcagcggactatactatttgaatgaagacggtgaatgggagagagaggcaggacgg
caagagaaggccggggagaaagttggtgggaaaagggcggccagaaagagaaacagactg
ggcggcagcaaccactcctccagctcagatgatgatgatgacgacaaggaagatgacggc
gatgggcacaaggaggatgacgacgacgacgatgacgacgacgatgacgacgaggccatg
gaggcctggctaaaggccgaggttcgcgacctgcgcgggcccgtgtggcaggccgtgcct
tcgctgcggtccagggagatcggcaaggagtctatccagtttgtgaggcgcgtttgcgga
gcgcgcggcctcgtgcagaggctggagctccagggccgcttggagagacacacaggctgc
gtcaacacgttgcacttcaacccctctggcacacgcctggcgtcgggcagcgacgatctc
cgggtggtgatctggaactgggctatccgccgcgccgagctggagttcgacagcggacac
aagagcaacgtgtttcaggcaaagttcttgccccacagcggggactccaccttggccatg
tgtgctcgggacggtcagatcagagtggccgagctctccgccacgcagcgctgtaagaac
acaaagcgggtagcgcagcataagggagcagcacacaagctggccttggagccagattca
ccttgttcatttctgtcagctggagaagatgccgtggtgtttggtattgacttgcgttta
gaccgtcctgccaacaaacttgcagttattaaggagggggataaaaaagtggggctgtac
actatttttgtgaatcctgcaaaaacacaccactttgctgttggcgggagagatcaatac
gtaaggatctatgaccagaggaagattaatgaaaacgacaacaatggcgtactgaaaaag
ttttgtccttcacatctggtatccagcgagtctaaaaccaacataacctgccttgtgtac
agtcacgatggcacagagctcctggccacttacaacgatgaagacatctacctgtttgac
tccaaccacagcgacggggccgactatcgccggagatataagggacaccgcaataatgcc
acagtaaagggggtgaacttttacgggccgagcagtgagtttgtggtcagcggcagcgac
tgtggacacatctacctgtgggacaagtactccgctcgcatcgtccagttcatggaggga
gacagaggaggagtggtgaactgtctggagccacaccctcacctgccaggcatggccact
agtgggctggaccacgatatcaaactgtgggcccccaccgccgaaacccccacaggactc
aagggcctgaaagaggtgatgaagaaaaacaagcgagagcgggatgaggacagcgttcgc
catggtgaccagtacgacacccagctgctctggttcctgatgagacacatgaggaacaga
agatccccaagatctcgccgcgaggcggcagatgcagacacagatgagtcctggagctct
ccagattcctcagatgaagaggaaggaggtccggaccacgtccaatgcatgtcatcttga
DBGET
integrated database retrieval system
