Cololabis saira (Pacific saury): 133452483
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Entry
133452483 CDS
T09849
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04144
Endocytosis
csai04517
IgSF CAM signaling
csai04520
Adherens junction
csai04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133452483
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133452483
09144 Cellular community - eukaryotes
04520 Adherens junction
133452483
04530 Tight junction
133452483
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133452483
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133452483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133452483
NCBI-ProteinID:
XP_061587804
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All DBs
Position
10:16055892..16344833
Genome browser
AA seq
1427 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLIAIYDEQEPHHGGDGTSASSTGTQSPDLFATDLSAGSGASAFTPY
QTASEIEVTPSALRTNMPLHVRRSSDPALLTVNGPFHAVESRVQTDEAPSRKNPTRWSTT
AGFLKARHASGTNSLERKGKSMDTYRSLPRDAGTWANQREFQRETARSSLSANHPMVDRW
LERQEQEDDTREEENGRIEPVGRADSCMDHTPVRSLEDIVKLVEVSNDGGPLGIHVVPFS
GRDRRTLGLLVKRLERGGKAEQQGLFQENDCIIRINNGDLRNIRFEQAQNMFRQAMRSPV
IMFHVVPSSVKGQYEQLSHSERTPSFSSGRFSPNSPSGSMTSSIDHNPQRMSRHGSQSHP
HSHPHPLPHPEPADGHPPLTHPAVSAVSAAKPPTGHAHSPQRGLNSTPTPGYAKKVGRRL
NIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLN
GRTQEEVVALLRATPMGGAVGLLVLRQEDTFLPREVNAEPQMQSPRDLHPRQPVTARNPH
WLNESVFGVDLEPIAKTEEDELVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENH
ADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQDAMETLRKSMSTEGNKRG
MIQLIVARRVAKRNEDPPESPLGPRQTVNTSLDDHERRISHSLYGGLEGLDDNLMPRQGT
IPRTIGNYQLSPTVNMPQDDTVIIEDDRPPLLPPHLSDHSSSSSHDDVGFAAEVTPSWAK
EVPAKVDSALIPDENNPDGAFQREGFGRQSMSEKRTKQFGDAAQLEIIKTRKSKSMDLVA
DEINLTPRPEADTGSSTKDVGPSLGLKKSSSLESLQTAVAEVTLNGDLPFHRPRPRIIRG
RGCNESFRAAIDKSYDRPAATEDDDEGMETLEEDTEESSRSGRDSVSTMADQTPLSGTEK
PLVNGTNRAKEEKKKDKDKMGKERKKPEGVKDKDKDKGKPKKGMLKGLGDMFRFGKHRKD
ERPGEKMDRKGSNKWRLEEMQVSEEETMKMRREQERIQAKTRELRERQARERDYAEILDV
SRTLERSSDEDHQYVGINPLNSSLDSGHSRPHSPRDDYPHIHHQHQHSDSLYTHVSKARG
DRPPSADSNRLTPSNHDRIQRLRQEFQQAQTVPDDPDDRRRTYSFEQPWSNTSSNGPGGY
SQPGRHSVSVEVQMQRQRQEERDSFAQAQRQYSSLPRQPRKNPSTISQESWDKAYPPGEG
FQTAKDNPRYSSYQGSRNGYPGGGGVNARVLLEAQELLRQEQRRREQEAKGKLMQESSSN
SSYETYTAHLKEPASPKGPYRHDVPPSPSQLARLNRLGSEKGRLFYS
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacggtgtgcttcggcaggacgcgggtggtggtgccgtgcggggacgggaat
atcaaggtccacactctcatccagcaggctgtcatgaggtacaagaaggccatcgccaag
gatgccagttactggctgcaggtccaccgattggagcacggcgatggaggaatcctcgac
ttggacgacgtgctctgtgacgtggccgacgacaaagacaggctcatagctatatatgat
gagcaggagccccatcacggaggcgacggcaccagcgccagctccacggggacccagagc
cccgacttgtttgccacagacctcagtgccggcagcggggcctcggccttcacgccctac
cagacagccagcgagattgaagtcactccttctgccctgcgcaccaatatgccactccac
gtccggcgcagcagcgaccctgccctgttgaccgtcaatgggccgtttcacgccgttgag
tcacgggtccaaacggacgaggcgccatccaggaaaaatccaacccgctggtccaccacc
gctggcttcctgaaagctcgccacgcgtctggcaccaacagcctggagaggaagggtaaa
agtatggacacataccgcagcctcccacgggatgcagggacgtgggccaatcaaagggag
tttcagcgagaaacagcccggtcgtccctcagcgccaatcaccccatggtggaccgatgg
ctggagagacaggaacaggaggatgataccagagaggaagaaaacggcaggattgagccg
gtcggccgagctgattcctgcatggatcacacccccgtgaggtctttagaagacattgtc
aaactggtggaggtctcaaacgacggtgggcctctggggatccacgtggtgcccttcagt
ggcagagaccgcaggactcttggcttgttggtcaagcgtctggagaggggaggcaaggcc
gaacagcaaggcctgtttcaggagaacgactgtatcatccgtatcaataacggggacctg
cgaaacatccgctttgaacaagcccagaatatgttccgtcaggccatgcgctctcccgtc
atcatgttccacgtggtgccatcatccgtgaaaggccagtacgagcagctctcccactcc
gagaggacgccttccttctcttcgggccgcttcagccccaactccccgagcggcagcatg
acatccagcatcgaccacaacccgcagaggatgtcccgccacggttcccagtcgcaccca
cactcgcatcctcaccccctccctcacccggagccggccgacggccacccgcctctcacc
cacccggccgtctcagccgtatcagccgccaagcctccgacgggccacgcccactcgccc
cagagggggctcaactccacccccacgccggggtacgccaagaaagtggggagaagactc
aacatccagctgaagaaaggccctgaaggtctcggcttcagcataacgtcgagggatgtt
cccatcgggggctcggcacccatctatgtgaagaacatcctgcctcggggagctgccatc
caagacggccgcctcaaggcgggagaccggctgttggaggtgaacggagtggacctgaac
ggccggacccaggaggaggtggtggctctgctccgggctacacccatgggtggagctgtg
ggactgctggttctgcgccaggaggacactttcctcccccgagaggtgaatgctgagccc
cagatgcaatcccccagagatttgcatccgaggcagcccgtgacagccaggaacccccac
tggttgaatgagagcgtcttcggcgtagatctggaacccattgcaaagacggaggaagac
gagctggtcctgacccctgatggcaccagagagttcctgacctttgagatccccctcagc
gactctggctctgcgggtttgggcgtcagcgtcaaaggcaaccgctccaaggagaaccac
gcagacctgggcatcttcgtcaaatccatcataaacggaggagcagcctgcaaggatggg
cggctgcgagtgaacgaccagctgattgctgtcaacggggagtcgctgttgggcaaaacc
aaccaagacgccatggagacgctacgcaagtccatgtcgacggaaggcaacaagcgaggg
atgatccagctcatcgtggccagacgagtggccaagagaaacgaggatcctccagagagc
ccgctgggaccccggcagaccgtgaacacctctctagatgaccatgagcgcagaatctcc
cactcgctctacggcggcctcgaaggcctcgacgacaacctgatgccacgacaaggaacc
atccctcgcaccatcggaaactaccagctctcgccgaccgtcaacatgcctcaggatgac
accgtgatcatcgaggacgaccggccgccgctcctccctccccacctctccgaccattcg
tcgtccagctctcacgacgacgtgggcttcgccgccgaggtcacgccgtcgtgggccaaa
gaggttcccgccaaagtagacagtgctttgattccagacgaaaacaatccggatggagct
ttccagagggaaggttttggacgccagagtatgtcggagaaacgcaccaagcaattcgga
gacgccgctcagctcgagatcatcaaaacgcgcaagtcgaaaagcatggatctagtagct
gacgagattaacctcacccctcgtcccgaggccgatacaggttcatccacaaaggacgtg
ggaccatcactgggcctcaagaagtccagctctcttgagagcctccagacagccgttgcc
gaggttaccctgaacggggacctcccgttccacaggccccgcccccgcatcatcaggggg
cgcggctgcaatgaaagcttcagagcagctattgacaaatcctacgaccgaccggcggcc
acagaagacgacgatgagggcatggagacgttggaggaggacacggaagagagttcacgg
tcggggagggactctgtgtccaccatggcagaccaaacgccgctatccggcacagaaaaa
cccttggtcaacggcaccaaccgcgccaaagaggagaagaagaaggacaaggacaagatg
ggcaaggagaggaagaagccggaaggagtgaaggacaaagacaaagacaagggaaaaccg
aagaagggcatgctgaaggggcttggcgacatgttcaggttcgggaagcaccgtaaggat
gagcggcccggggagaagatggatcgcaaaggctccaacaagtggaggctggaggagatg
caggtgtcggaggaagaaaccatgaagatgaggcgggagcaggagaggatccaagccaag
accagggagctgagggagcgccaagcccgtgagcgggactacgccgagatcctggacgtg
agccgcaccctggagagatcctccgacgaagaccaccagtacgtcggcatcaacccactg
aacagctcgctggacagcggccacagtcggccccacagcccccgggacgactacccccac
atccaccaccagcaccagcactccgacagcctctacacccacgtcagcaaggcccgcgga
gaccggcctccttccgcagacagcaaccggctaacccctagcaaccacgaccggatacag
aggctgcggcaggagttccagcaggcccagaccgtcccggacgaccccgacgaccgcagg
aggacgtacagcttcgagcagccctggtcaaacaccagcagcaacggtccgggcgggtac
agccagccgggtcgccactcggtgtcggtggaggtgcagatgcagcggcagaggcaggag
gagagagactcgttcgcccaggcacagcggcagtacagctccctcccacggcaaccgagg
aagaacccgagcaccatctcccaggagtcgtgggataaggcgtacccaccgggcgagggc
ttccagacggccaaggacaaccccaggtactccagctaccagggctccaggaacggctac
ccggggggcggcggcgtcaacgccagggtcctcctggaggcccaggagctcctgcggcag
gagcagagacgcagggagcaggaagccaaaggaaagctgatgcaggagagcagcagcaac
agcagctacgagacgtacacggcacacctgaaggagccggcgtcccccaagggtccgtac
cgccacgacgtgccgccgtcgccctcgcagttagccaggcttaacaggctgggctcggag
aaaggaagacttttttattcttga
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