Cololabis saira (Pacific saury): 133452498
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Entry
133452498 CDS
T09849
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133452498 (zeb1a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
133452498 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_6
Homeodomain
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
133452498
NCBI-ProteinID:
XP_061587830
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All DBs
Position
10:complement(17535678..17608616)
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AA seq
1117 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTNFNNGLEASSDSDDEDKLHIVEDDSLQEPDISNAEGTTP
LDSHDAAITVLPHNGSWNGVKEECVSEEEEEEEDVKDPLVEEILQQGDTAVIYPEAPEDE
HSPAETGGVDENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSDDNYSCSHCSYT
FTYRSQLERHMSHHRHTKEQYHSCRPTGGSAGTGGTRKFKCTECFKAFKYKHHLKEHLRI
HSGEKPYECSNCKKRFSHSGSYSSHISSKKCVGAAPPNGVTRAAIMKSPSPTAQARPVAI
APAQMLLKEKTESKPLQEQLPVTQIKAEPVEYECKPTMAAAPTSTSSNGVVNGGSAPPAP
APAAALPQGVAMVVPTVGLMSPVSVNLNDLQRVLKVAMDGNVLRQVLGSANGLVTQGKQG
IVVQQPQQQIISLPAFVDHDGTTKIIINYSISPAAGGAAQPTPLLIKNNLPAPTLVTAAV
APPPSAKTGKPETAEAADLSLAKTEVESEPVKDEETKATGEKALASVEASKKAPMPKSCS
TNTCLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLNEAGVTLEEPPVDDVL
SLLKTYFTSNASPGEEEMAKIAESVSIPVDVVKKWFGKMNSGKNVDKCHSEAPAASEKTE
TTKSGSEDTLTLKEEEGGTTQVESGRVPSDSGRTSPADSTSAGLNDGDLVIVKSEPEDPE
APDSQAEPLDLSLPKHAGDEQNQMTAPPPKQQEQPLNLSCLRKEQLEGQTIYVTAPQTGR
PVNIVTAAQLPTLVAIASQGTVGCISAINTTTKRTILIPQLTYTYSTTAGNNTGAKTVVL
NGHKEKRPESSPDAVSSLEEQYDAKKRRMENGVYPCDLCSKVFQKGSSLLRHKYEHTGKR
PHECSICNKAFKHKHHLIEHARLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDG
LIPGSPMGAPVMHVERNPPSQMDSSEGEGEGEEYEDDEAISMDDIRVVQVDDGECEIYEG
NFDDYEEEEALLADDDPGVTEEREIARAAQEFACDVVEVELSGEQPQGDSSVEKKAEKAE
SASVAAESKADCEADKNESVREGSGGTEPSEEKMTNI
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggagcagcgtg
acaaacttcaacaatggcttggaggccagttcagactccgatgatgaggacaagctccac
attgtagaggatgatagtttgcaggagcctgacatctccaacgctgaggggaccacgccg
ctggacagccatgatgccgccataacagtattaccccacaacggctcctggaatggagtg
aaggaagaatgtgtgtcggaagaagaagaagaagaggaggatgttaaggatcctctcgtg
gaagagattctccagcagggcgacacagccgtcatctatcctgaagcccctgaggacgag
cacagtccggcagaaacaggaggcgtagatgaaaatggcacaccggacagcttctcccag
ctgcacacttgcccatactgctcccggggctacaagcgcaacgcctcgctgaaggaacac
attaagtatcgtcacgagaccagcgacgacaactacagctgctcgcactgcagctacacc
ttcacctaccgctcgcagctggagcggcacatgagccaccaccggcacaccaaggagcag
tatcacagttgccggccgacgggaggatcagcaggaacaggtggaacccgcaagttcaag
tgtactgaatgtttcaaggcctttaaatacaaacaccacctgaaggagcacctgcgcatt
cacagcggagagaaaccatatgagtgctccaactgcaagaagcgcttctcccattcgggc
tcctacagctcccacatcagtagcaagaagtgtgtgggtgcagcgccgcccaacggggtc
acccgagcagccatcatgaagtccccctccccgaccgcgcaggccagacccgtagcaatc
gctccggcccagatgctcctgaaagagaagacggagagcaaaccgctgcaggagcagctg
cccgtcacccagatcaaagccgagcccgtggagtacgagtgcaagcccacgatggcggcg
gcgccgacctcgaccagtagtaacggcgttgtgaacggaggctcggcgccgccggcgccg
gccccggccgcggcgctgcctcagggcgtggccatggtggtgccgaccgtgggcctcatg
tcgcccgtcagcgtcaacctcaacgacctgcagcgggtgctgaaggtggccatggacggg
aacgtgctccgccaggtgctgggctcggccaacgggctggtgacgcaggggaagcaggga
atcgtagtccagcagccgcagcagcaaattatcagtcttcctgccttcgtggaccacgac
ggcaccacgaagatcatcatcaactacagcatcagccccgcggccggcggcgccgcccag
cccacgccgctcctcatcaagaataacctccccgcccccacgcttgtgacggcagccgtc
gcccccccgccctcagccaagacaggaaagccggagacggcggaggctgccgacctcagc
ttggcgaagacggaggtggaatcagagcccgtcaaagacgaggagaccaaggcgacgggg
gagaaagcactggcgtctgtggaagcgtcaaaaaaagctcccatgccaaaatcctgcagc
actaatacatgtttactatgcgatgactgtcccgataacctagaggctttgcatctgctt
caacaccgcaaagcagccaacggcgaggcggtggactcggcggctctggatccgtccttc
gccgctctgctgaacgaggccggagtgacgctggaggagccgcccgtggacgacgtcctc
tcgctcctcaaaacgtactttacctccaacgccagccccggcgaggaggagatggccaag
atcgccgagtccgtcagtattccagtggacgtggtcaaaaagtggtttggcaaaatgaac
tctgggaagaacgtagataagtgccacagcgaggctccagcggcttcggaaaagactgaa
accacaaagtccggctcggaggacacgttgactctgaaggaggaggagggcggcaccacg
caggtggaatcaggccgggtcccctcggactccggcaggacctccccggcagactctacc
tccgccggcctcaacgacggggatctggtcatcgtgaagagtgaacccgaggacccggag
gcccccgactcccaggcagaacccctggacctctctctgcccaaacacgccggggacgag
cagaaccagatgacggcgccgccgcccaagcagcaggagcagcccctgaacctgtcctgc
ctgaggaaggagcagctcgagggtcagaccatctacgtgacggcgccgcagaccggaaga
cccgtcaacatcgtcacggccgcgcagctgcccaccctggtggccatcgccagccagggc
accgtgggctgcatcagcgccatcaacaccaccaccaaacgcaccatcctcatcccccag
ctcacctacacctactccactacagccggaaacaacactggagccaagaccgtcgtactc
aacggtcacaaggagaagcgcccggagagcagtcctgacgccgtttcctccctggaggag
cagtacgacgccaagaagcggcggatggaaaacggcgtgtacccctgtgatctgtgctcc
aaggtcttccagaagggcagctcgctgctccggcacaaatacgaacacacaggtaaacgt
ccccacgaatgcagcatctgcaataaggctttcaagcataaacaccacctgatcgaacac
gcgaggctgcactccggggagaaaccctaccagtgtgacaagtgcgggaagcgcttctct
cactcaggctcgtactctcagcacatgaaccaccgctactcctactgcaagaaggacggg
ttgatcccgggctcgcccatgggagcgcccgtcatgcacgtggagaggaacccgccctcc
caaatggactcgagcgagggggagggggagggggaggagtacgaggacgacgaggccatc
tccatggacgacatccgggtggtgcaggtggacgacggcgagtgcgagatctacgagggg
aactttgacgactacgaggaggaggaagcacttttggcagacgacgatccgggggtcact
gaagagcgggaaatagcgagggcggcccaggaatttgcctgtgacgtggtggaagtggag
ctcagcggagaacaaccgcagggcgactcgtctgtggaaaaaaaagccgaaaaggcggaa
tcggcaagtgtggctgcagagagtaaggcagactgtgaagcagataaaaacgagagcgtc
agggagggttcaggcggcacggaaccatcagaggaaaagatgacaaacatttga
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