Cololabis saira (Pacific saury): 133452534
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Entry
133452534 CDS
T09849
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133452534 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
133452534
NCBI-ProteinID:
XP_061587896
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Position
10:complement(18613103..18628018)
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AA seq
701 aa
AA seq
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MDLLLIKWLVYSVSCVFFVGVNCNSVDKKIYVHLNYTIPCVRLLNATHQIGCQSSLSGDV
GVLHVLESEENLDWVVRSGLNPPYMVVLESMFFTRSIMMKLKDTPSRVAGVVVVAPSTNP
PEGSSPHTGCPNELTGVYSESYGPALAHCNETLWNPWGTGLSYEEFDFPIFSLKDDNDTQ
VIRQCYMDHNRASNGSNPQYPLCAMQLYSHMFAVTDTPTCMRRNDINFSLTPEMVCDPLG
DFNVWASTKPINNTAKGHKTGENFVIAAARLDSRSFFFDIAPGADSAASGFITLLAAAHA
LRNATQEGQLNRAILYTFFQGETFDYIGSSRMVYDMENNQFAVDMDNVHSVLEIGQVGLH
TDSKLWLHTDPVSTRNSSVNEEVRRLINNLQSAAKSLNFSVEEPSVTQPLPPSSFQRFLR
ARPIPGVVIENHESGYTNRYYESMFDNADLLKISYPPNLTPEEELEFVTDTAKALTKVAT
MVARALYAQAGGEASQLSSIEADPLLVSQMLYSFLVRSNNSWLQQLIPSDLMSYLSDTTT
NLYVGVTQQPSKPTYLVQCLLANFTGSTVNVTQEDCQNQRASEDDKESKHMYSYLWVQGA
VAPNSTEREGYCVRSTARLSKAVSPAFDLREYTSKNYSTWTESRWKSIKGRIFLVASHEL
EMMTLGVGISVLVMSLILTYVISSKADILFSSGREPASATY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggatttattgttaatcaaatggcttgtttattcggtttcttgtgtgtttttcgtgggt
gtcaattgtaactcagtggataagaagatttatgtgcacctcaattacaccatcccatgt
gtgcgactgcttaacgcaacacatcaaataggctgccagtcttctctgtcaggggacgtg
ggtgtgctccatgtgcttgagtcggaggaaaacctggactgggtggtacgctctggtcta
aacccaccttatatggttgtcctggagtccatgttctttacgagatccataatgatgaag
ctcaaagacactcccagcagggtggctggtgttgttgttgtggcaccaagcacaaatcca
ccagagggctcctccccgcacacgggctgtcccaacgagctcacaggtgtgtattcagag
agctacggcccggccctggcccactgtaacgagacgttgtggaacccatggggaactggt
ctgtcttacgaggagtttgacttccctatcttctccttgaaggatgacaatgacacccag
gtcatacgacagtgttacatggaccataaccgtgcttcgaatggcagcaatccccagtac
ccgctttgtgccatgcagctctactcccacatgttcgctgtcaccgatacgcccacctgc
atgaggagaaatgacatcaactttagcctcactccagagatggtgtgtgacccgttgggg
gactttaatgtttgggcctccaccaaacctattaacaacacagccaagggccacaagaca
ggagagaattttgttatagcagcagcaaggctggacagcagatctttcttcttcgacatt
gctcctggagcagacagtgcagcctctgggtttatcaccctgctagctgctgcacatgct
ctgcgtaacgccacccaggagggtcaacttaaccgcgcaatcctctacaccttcttccaa
ggggaaacctttgactacattggcagttcaagaatggtgtacgacatggagaataatcag
ttcgctgtggacatggacaatgttcactctgtgctggagattggacaggtgggactccac
accgactccaagctctggcttcacactgatcccgtgtctacgaggaacagcagtgtcaat
gaagaggtgaggagactcatcaacaacttgcaatcggctgccaaaagcctgaacttctcg
gtggaggagcccagcgtcacccagcctctgcctccctcgtctttccagaggttcctgcga
gctcggccaatccccggggttgttattgaaaaccacgagtccggttacactaacaggtat
tacgaaagtatgtttgacaacgcagaccttctgaagatatcttacccaccaaacctgacg
ccggaggaggagctagaattcgttacagacactgcaaaggctctgactaaggtagcaacc
atggtggctcgagctctgtatgcacaagccggaggagaagcatcccagctgagcagcatc
gaggccgacccactcctagttagtcaaatgctgtacagtttcctggttcggtccaataac
tcgtggctgcagcagctcataccctccgacctcatgagctacctgtctgacacgactaca
aacctctatgtcggtgtgactcagcagcccagcaaaccaacgtatctggtccagtgcttg
ctggctaattttaccggcagcaccgtcaacgtcacccaggaggactgccagaaccagagg
gcgagtgaggatgataaggaaagcaaacacatgtacagctacctgtgggttcaaggcgca
gtagctcccaacagcacagagcgggaaggttactgcgtccgctccaccgctcgtctgtcc
aaggcggtgtcccctgcctttgatctgcgagagtacacctccaaaaattactccacgtgg
acggagtccagatggaagagcatcaaaggacgcatattcctggtggctagtcatgaactg
gagatgatgacgcttggcgtgggcatcagcgtgctggtaatgtccctcattctgacttac
gtcatcagctcaaaggctgacatactgttcagctcggggagagagcccgccagcgccacc
tactga
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