Cololabis saira (Pacific saury): 133452538
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Entry
133452538 CDS
T09849
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04020
Calcium signaling pathway
csai04148
Efferocytosis
csai04218
Cellular senescence
csai04310
Wnt signaling pathway
csai04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133452538 (nfatc4)
04020 Calcium signaling pathway
133452538 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133452538 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
133452538 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
133452538 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133452538 (nfatc4)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
133452538 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
133452538
NCBI-ProteinID:
XP_061587899
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Position
10:complement(18674629..18697928)
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AA seq
890 aa
AA seq
DB search
MGAAPGSGWEEGEFEFKLVFEEDPPARRSQGPSPGRAAGPERAAAGEDGEGAPLQPEPSG
GGDPGHSISIPSPPQLSSQRAGMHSPPPRRAPIREFSGTYESLPARSVQVSESRVVECPS
IQITTISPEDEPAPTIPSYWDMGSGGGWDRERLYLPFLDPFSYRDRCPGSLSPSPASSPS
SRGWLSPASSCDSLLVEEDELSESTVNFGLSPSSRPTSPGGKKRRNSPLASPCTSRRGSY
SEDLQGCNLDGGESNSHSQAPPSSCELSIPQKTRKTSLEQLSPREVDQEQAPGHSSPCLL
SETPQTRREPPSLGMDYLPVPPALAWGRTRASAHSPLFRSNALPPLDWPLPSQFDQFELR
IEVQPRPHHRAHYETEGSRGAVKASPAGHPVVKLCGYTERKPLSLQVFVGTADDRSIRPH
PFYQIHRVTGKMVGTASHESVQAGTKVLDIPLNPENNMTALIDCAGILKLRNSDIELRKG
ETDVGRKNTRVRLVFRTHLPVAPPVGPPGRLLALQASSLPIECSQRSAQELPVVESVSLT
SCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAYVDRDNSNECLLCVRVPAYS
DLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSRPSAPPLDGGIVCPVGAP
PRMDRSFNVSDERGIGFHLPPYPSTYSPPCTAMSYHEEYCSKPDAAVEDPGGSRAALSER
HPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPFPTGSPI
SNSPLPPIPTSPYPQYSAYPQEVCPSPPTNLNPYHDVCPAPYSHYEGWDPQGRMLGMGHG
REGDAKIQECPLDFNSSASMHHLTFEEVSEFIGEDIQSYQSSSHLSNQPN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggatgggaggaaggcgagttcgagttcaagctggtgttt
gaggaggatccgccggcgcgccggagccaggggccgtccccggggcgcgctgccgggccg
gagcgcgccgcggccggggaggacggcgagggcgccccgctgcagccggagccgtccggc
ggcggagacccgggacactcaatcagcattcccagcccgccacaattatccagccagcgg
gcagggatgcattccccacctccccggcgggcccccatcagagagtttagcgggacctac
gagagcctgccagcacgatctgtacaggtttcagagtcccgtgttgtagagtgcccaagt
atccagataactaccatctcacctgaggatgaaccagcacccaccatccccagctattgg
gacatgggcagcggtggcgggtgggacagggagcgcctctacctcccgttcctagacccg
tttagttaccgggacagatgcccgggatccctcagccccagccccgcgtccagcccatcc
tcccgagggtggcttagccctgcctccagctgcgactccctgctggtggaagaggatgag
ctcagtgagtccaccgtcaactttgggctgtcgccgtcctcaaggccgacgtcgcctggt
ggtaaaaaacgcagaaactcaccgctagcctctccctgtacttcacggagaggcagttac
tcagaggacctacagggatgcaacctagacggcggagagtccaactctcactcacaagcc
ccacccagtagctgtgagctcagcatcccacagaaaaccaggaagacttcattggagcag
ttgtctcccagggaagtggatcaggagcaggctccgggccacagctccccctgcctgctg
tcggagacgccgcagactcggagagagcctccctcgctgggtatggactatctccccgtg
ccccccgctctggcctggggcagaaccagggcgagtgctcacagccctctcttcaggtct
aacgccctgcctccgcttgactggccgctaccgtcccagtttgaccagtttgagctgcgg
atcgaggtgcagccccgtccacaccacagagcacactatgagactgagggcagcagagga
gccgtcaaagcctctccggcagggcatcctgtcgtcaagctgtgtggatacacagagagg
aagccgctctcactgcaggttttcgttggaacagctgacgaccgctcaatcaggccgcat
cctttctatcagatacacagggtgacgggaaagatggtcggcaccgccagtcatgagagc
gtccaggcagggacaaaagtgctggacatccccctcaaccctgagaacaacatgaccgcg
ctcatcgattgtgctggcatcctgaaactgagaaactccgacatcgagctgaggaaagga
gaaacagacgtcgggaggaaaaacacgcgtgtccgtttggtgtttcgcacccaccttcct
gtagcgccccctgtgggcccccctggacggctcctggctctgcaggcgtcctctcttccc
attgaatgctcccagcgttcggctcaggagctgcccgtcgtcgagtctgtcagtctcact
tcctgctctgtggaaggaggggaggagctactgctgagcggtaccaacttcctgcccatc
tccagagtccttttcatggagagagggacagacggtaaattacagtgggaggaggaggcc
tatgttgaccgggacaacagcaacgagtgcctgttgtgtgtgagggtcccagcctacagc
gacctctccgtcagccggcccgtgtccgtcagtctgtacgtctctaacgggaagagaaaa
cgaagcagcactcactgcttcaaatatttgcccgttatgttcaaagaggaggatcccctg
ctgtccaggccctctgctccacctctggatgggggaattgtgtgtccagtaggggctcca
cccaggatggaccggagcttcaatgtgtctgatgagcgaggcattggattccacctgccc
ccttacccctccacgtattctcccccctgcacggccatgagctaccatgaagagtactgc
tccaaacctgacgctgcggtcgaggaccctggcgggtccagggcagccctgtccgagcgt
caccccagttttgagaaccttgagctgggcttcaccgagcttcttcctcccttatatccc
cggggcccgcagcctccctccccctccccttctccctggttggactctccgtacctctct
tcatcaccctccccctcccactcctcctccctcagcccctttcccactggaagtcccatc
tcgaactcccctcttcctcccatccccacctcgccttacccgcagtactctgcttatcct
caggaggtctgtccttccccaccaacaaacctcaacccctatcacgacgtctgcccagca
ccttactcccactacgagggctgggacccccagggaaggatgctgggtatgggacatggg
agagagggggatgccaagatccaggagtgccctttagattttaacagctctgcctcgatg
caccaccttacatttgaagaagtgtcagagttcatcggggaggacatccagtcttaccaa
tcaagttcgcatctaagcaaccagccgaactga
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