Cololabis saira (Pacific saury): 133452588
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Entry
133452588 CDS
T09849
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133452588
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133452588
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133452588
NCBI-ProteinID:
XP_061587985
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All DBs
Position
10:21023233..21046002
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AA seq
549 aa
AA seq
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MTKKKQGVHFVQPLCRNINRRGQRAAMDGDVAVGVKRGSDELNMYSSSPSSMTANGSDSK
KQRLDESPPSRVLHIRKLPNEVTETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAI
TMVNYYTAVTPQVRNSPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDPGV
LELAPPPSPVLRIIIDNLFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVN
AQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGESTNKDHS
LLGTPSGALASYSSGGSYSSSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLA
SNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFG
KVMRVTLSKHQTVALPREGLDDQLLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNI
RDGVGEEDLRLLFSNSGGSVKAFKFFQDRKMALIQMSSVEEAIQALMDLHNYDMGGNHHL
KVSFSKSTI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagaaacagggcgtccattttgttcagccgctctgcagaaacatcaacaga
agaggacaaagagctgcgatggacggtgatgttgcagttggtgtgaagagaggctcagat
gagctgaacatgtacagtagcagccccagctccatgaccgcaaacggcagtgacagtaag
aaacagcgcctggatgagtctcctccctccagagtcctccacatcagaaagctgcccaat
gaagtgacggagactgaggtcattgctctaggactgccgtttggaaaggtcaccaatata
ttgatgctgaagggaaaaaaccaggcatttctagagttgggtacagaggaagctgccatc
actatggtcaactactacactgcagtcacgccacaggtcagaaactctcctgtgtttatc
cagtattctaaccataaggaactgaaaacggattcggctctgaaccagagagcccaggcg
gtgctgcaggcagtgtcagcagtgcaggagggaggctccccatcctccgacccgggagtt
ttggagctggccccacccccaagcccagtcctccgaattatcattgacaacttgttttat
cccgtaacactggatgttttacaacagatcttcagcaagtttgggactgtgatgaagatc
ataacctttactaagaataaccaatttcaggctcttctgcagttcagtgaccctgtcaac
gcacagcaagccaaactgtctttggatggccagaacatctataactcatgctgtacactg
cggatagacttcagtaaactggtcaacctcaatgtcaaatacaacaatgataagagtcgt
gattacaccagacctgacctccctacaggagacggagagtcaaccaacaaggatcactct
ttattgggtaccccatctggagcgctagcttcctactctagtggaggaagttattcatca
tctctctccctctcgcagggtggaggagccatcagtcctctgagtgctgcagccgcagca
gccgcagctgcgggccgtgttgctctgtcggggtctggagtgtccggggtcctgttggct
tccaacctaaatgaagagatggtcacgcctcaaagtctctttaccctcttcggagtctat
ggtgatgtccagagggtgaagatcctctacaacaaaaaggacagtgcccttatccaacta
tctgatggtaaccaggctcagcttgcgatgagccacctaaatggtcaaaaggtgtttggt
aaagtgatgagagtgacattgtcaaaacatcaaaccgtggccttgccaagagaagggttg
gatgaccaactgctgactaaagatttttctggctctccactccatcgcttcaagaagccc
ggctccaaaaacttccagaacatctttcctccgtcagcaactcttcacctctccaacatc
cgggatggagtcggagaggaagatctccgccttcttttctctaacagtggaggatcagtc
aaggctttcaagttcttccaagaccggaagatggctttgatccagatgtcatcggtagag
gaagcgatccaggctcttatggaccttcacaactacgacatgggagggaatcaccatctt
aaagtttccttttcaaagtctaccatctaa
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