Cololabis saira (Pacific saury): 133452596
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Entry
133452596 CDS
T09849
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133452596 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133452596 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133452596 (zgc:136908)
03009 Ribosome biogenesis [BR:
csai03009
]
133452596 (zgc:136908)
04131 Membrane trafficking [BR:
csai04131
]
133452596 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133452596 (zgc:136908)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133452596 (zgc:136908)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133452596 (zgc:136908)
Membrane trafficking [BR:
csai04131
]
SNARE
SNARE associated proteins
Others
133452596 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133452596 (zgc:136908)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133452596 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
RNA_helicase
AAA_14
AAA_28
NPHP3_N
Vps4_C
Parvo_NS1
ATPase_2
Mg_chelatase
AAA_7
ATPase
nSTAND3
AAA_18
IstB_IS21
DUF815
ABC_tran
AAA_17
NACHT
TsaE
AAA_24
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
133452596
NCBI-ProteinID:
XP_061587999
LinkDB
All DBs
Position
1:34154477..34165390
Genome browser
AA seq
808 aa
AA seq
DB search
MPGPGGADPKGEDFSTAILKQKHRPNRLIVDEALSEDSSIVSLSQNKTEELQLFRGDTVV
VRGRKRRQTVCIVLTEDTCADERIRMNRVTRNNLRIRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLTGNLFEVFLKPYFLEAYRPVHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAENNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLTDDVDLERIATETHGHVGADLAALCSEA
ALQAIRKKLTLIDLEDETIDADLLNSLAVSMDDFQWALGQSNPSALRETVAEIPKVNWED
IGGLSEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDKASRTAILK
ANLRKSPIAKDVDLEILSRITEGFSGADLTEICQRACKLAIREAIEAEIKAERQRQSRPG
VPMDEDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFSQTLQQSRGFGNFRFPSATG
TRSGGQESGAGSGRPGLYRDEGEDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcccaggaggagcagacccaaagggagaagatttctccacagccatcctgaag
cagaaacacagaccaaacagactcatcgtggatgaagccctcagtgaagacagcagcatt
gtcagcctgtcacagaacaagacagaggagttgcagctattccgtggggacacagtggtg
gtaagaggaaggaaacggcggcagactgtatgcatcgtcctgaccgaggacacctgtgca
gatgagcggattcggatgaacagagtgacgcgcaacaacctgcgcatccggcttggtgat
gtcatcagcatccacgcctgccctgatatcaagtatgggaaaaagattcatgtcctcccc
attgatgacaccattgagggcctgacggggaacctctttgaggttttccttaaaccatac
tttctagaggcttaccggcctgtacacaaaggggacatcttcctggtgaggggaagcatg
cgggcagtggagttcaaggtggtggagacggatcccagccctcactgcattgttgctcca
gacactgtcatctactgtgagggagagcccatcaaacgagaggatgaagaggagagtctt
aatgacattggttatgatgacatcggaggctgtcggaaacagctggctcagatcaaagag
atggtggagcttcctctcagacatccaggactcttcaaggccataggagtgaagcccccc
agaggtatcctgctctacggcccggcaggtacagggaagacactggtggctcgagctgta
gccaatgaaactggtgccttcttcttcctcatcaacggtcccgagatcatgagcaagttg
gcgggagagtcagaaagcaatttgagaaaagcatttgaggaggcggaaaacaatgctcca
gccatcatcttcatcgatgagctggatgccatcgctcccaagagggagaagactcacggt
gaagtggagaggcgtatcgtgtcgcagctgttgaccctgatggatggcttgaagcagaga
gcacatgtgattgtcatggcagcaacaaaccgcccaaacagtatagaccctgctctaaga
cgctttggcaggtttgaccgtgagattgacattgggatcccagactcgactggtagactg
gagatcctgcagatccacaccaaaaacatgaaactaaccgatgatgtggacctggagagg
atcgccacggagactcatggccatgtgggtgctgacctggctgctctgtgctcagaagct
gctctgcaagccatccgcaagaagctgacgttgatagacctggaagatgaaaccatcgat
gccgacctgctcaactccctggctgtcagcatggatgacttccaatgggccctgggtcag
agcaacccatcagctctgagagagacagtggcagagattcccaaagtcaactgggaggac
attggaggactgagcgaggtcaagagagagctgcaagagcttgttcagtaccctgttgag
tatcctgataagttcctgaagtttgggatgaccccgtcccgtggggtgttgttctacggc
cctcctggctgcgggaaaaccctcttagcaaaggccatcgccaatgaatgccaggctaac
tttgtgtccatcaaaggccctgagatgctcaccatgtggtttggagagtcagaggcgaac
gtcagagacgtgtttgataaggccagacaggctgcaccctgcatcttgttttttgacgag
ttagactctattgccaaatccagaggaggcggagcaggggatgcaggcggtgcagccgac
agagtcatcaaccagatcctcacagagatggacggcatgtctgacaaaaagaacgttttc
atcattggtgccacaaacagacccgacatcatagacccggccatcctgcggccgggtcgt
ctggaccagctcatctacatccctctgcctgacaaagcctctagaacagcaattctcaaa
gccaacctgcgcaagtctcccattgcaaaggatgtggatctggaaatcctgtctcgcatc
acagagggtttctctggagccgacctgacagagatctgtcagcgagcttgtaagctggcc
atccgggaggctattgaggccgagatcaaggctgagcgtcagagacagagcagaccgggc
gtccccatggatgaagactatgatccagtcccagagatcaggaaggatcactttgaagag
gcgatgcggttcgctcgtcgctctgtcagtgacaacgacattcgcaagtatgagatgttt
tctcaaactctgcagcagagccggggttttggaaacttcagattcccttctgctactggg
actcggtctggaggtcaagaatccggcgctgggtcaggcaggccgggtctgtacagagat
gaaggagaagatgatctctatcagtaa
DBGET
integrated database retrieval system
