Cololabis saira (Pacific saury): 133452614
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Entry
133452614 CDS
T09849
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133452614
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csai03310
]
133452614
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133452614
Nuclear receptors [BR:
csai03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133452614
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133452614
NCBI-ProteinID:
XP_061588054
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Position
10:22542809..22557250
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AA seq
500 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVVSSGGGSTALSLP
REDGLCGGGPEDGEEGLSRSYSSGGSTSTLSDLDDIAALPDLFDLPLTPEEASEYCSLEL
LGGGGTSTGNTSNSSSSSSSSSSLSNQNSPQQTMLDTMDTSGIQFLHNHPLLARSHSLLD
HLPDDCSITDLEHITQSIVKSHMETCQYSAEDMKRFTWVQYTPEETRAFQSKSAEWMWQQ
CAHHITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNCNNSSIFFN
GKFASAQFFKALGCDDLVSAVFELGKGLCRLQLSDEEMALFSAAVLLSPDRPWLTEGQKV
QKLQEKVYLALQHSLEKSGASEEKLDKMVSKLPVMKSICNLHIDKLEFFRLVHPETAYSF
PPLYREVFGSEMSLPDSTDS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcagatcgaggtcatcccgtgtaaaatctgcggggataagtcctcaggaatt
cactatggagtcatcacctgtgaaggctgcaagggtttcttccgtcgtagccagcagaac
aatgccatgtactcctgttcgcgtcagaggaactgtttgatcgaccgaactaaccgcaat
cgctgccagcactgtcgcttgcagaagtgcctggctctgggcatgagccgagatgctgtg
aaatttggtcgcatgtcaaagaagcagcgcgacagcctctacgctgaggtccagaagcat
cagaagtcccaagagtgtgtggtgtccagcggcgggggctccactgctctgtctttaccc
agggaagatggattgtgtggtggtggcccagaggacggtgaggagggtctgagccggtcc
tacagcagcgggggctccacctccaccttgagcgatctggatgacattgcagcactgcct
gacttgtttgacctgccgctgactcctgaggaggccagcgagtactgcagcctggagctg
ctcggaggtggaggaaccagcaccgggaacacctccaactcctcatcttcctcttcctct
tcctcatccttgtccaatcagaactccccccagcaaactatgctggacacaatggacacc
agtggtatccaattcctgcataatcatccgctgctggcacgcagtcattcactgctggac
caccttcctgatgactgctcaataacagacctggagcatataacacagagcattgttaag
tctcacatggagacatgtcagtacagtgctgaagacatgaagagattcacctgggtacag
tacacgccggaggagacacgggcttttcagagcaagtcagctgagtggatgtggcagcag
tgtgcgcaccacatcaccaacgccatccagtacgtggtggagtttgctaagcgtatcgct
ggcttcatggacctgtgccagaatgaccagattatactgctgaaagcaggctgcctggaa
gtcctgctcatacgtatgtgccgcgccttcaactgcaacaacagctccattttcttcaac
gggaagtttgcttcggctcagttcttcaaagcccttggttgtgacgacctggtcagtgca
gtgtttgaacttgggaaagggctctgccgtctgcagctgtcggatgaggagatggctctg
ttcagcgccgctgtccttctgtcccctgatcgaccctggctgactgaaggccagaaggtt
cagaagctccaagagaaagtctacttggctctgcaacacagcttagagaagagtggtgcc
tctgaagagaaactggacaagatggtgtccaagctgcccgtgatgaagtctatctgtaac
ctccacattgacaaactggagtttttccgtttggtccacccagagaccgcctacagtttt
ccaccgctgtaccgggaggtgtttggcagcgagatgtctctcccagactccactgacagc
tag
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