Cololabis saira (Pacific saury): 133452630
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Entry
133452630 CDS
T09849
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133452630
Membrane trafficking [BR:
csai04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133452630
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_14
LRR_LRWD1
LRR_9
LRRNT
LRR_6
V-set
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
133452630
NCBI-ProteinID:
XP_061588069
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Position
10:complement(22848413..22896616)
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AA seq
622 aa
AA seq
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MTDSSGPGGQALVPWPRVWRWLLLTSLVTVITLTLPGSSQACPPRCECSAQLRSVSCQRR
RLINVPEGIPTETRLLDLSKNRLRWVQAGDLTPYPRLEEVDLSENLIATLEPNAFSALQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKIVILLDYTFQDLKNLKHLEVGDNDLV
YISHKAFSGLLGLEDLTVERCNLTSISGQTLSYLRSLVTLRLRHLSITALEDQNFRKLSN
LRGLEIDHWPYLEYISPLSFQGLDLHWLSITNTNITSAPSASFKNLVHLTHLNLSYNPIT
TLEPWAFKDLLRLKELIMVSTGLMAVEPHAFGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSTFTDSALFDHFT
CQKPKIRNRKMQQVVAREGQPVSFLCRADGDPTPAIIWISPQRRRITAKNSGRITVLPSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDAASAFFLNRSLYSGEFFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRRNNFTVEYSF
RKSEPSTGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacggactcttctggccctggggggcaagccttagtgccgtggccaagggtgtggcga
tggctcctgctcacttcactggtcactgtgataactttgactctgccagggagcagccaa
gcctgcccaccgcgatgcgagtgctcagctcagctgaggtcagtgtcatgccagaggcgg
cggctcatcaacgtcccagagggtattccaactgagactcggctcttggacctcagcaag
aaccgcctccgttgggtgcaggcgggtgacctaacaccgtacccacggctggaggaagtg
gacctcagtgagaatctcatcgccacattagagcccaatgccttctctgctcttcaaaat
cttaaagtgctaaagttaaggggaaaccagctcaagttagtgcccatgggagcctttgcc
aagctgggaaatttgacaagcctagacctgagtgagaacaagatagtgatcttactggac
tacaccttccaggatctgaagaatctgaagcacctggaggttggagacaatgacctggtt
tatatatcccacaaggcattctcagggttacttgggctggaggatctcaccgtagaacgt
tgcaatcttacttccatttctggccagacactgtcctacctccgcagtcttgtcactctt
cgccttcgccacctcagcatcactgccctggaggaccagaacttccgcaagctctcaaac
ttgcggggtctggaaattgatcactggccgtacctagagtacatctctcctcttagtttt
caaggcctggaccttcattggctctccatcaccaatacgaatatcacctctgccccatct
gcctctttcaagaacctggtgcatctcacccacctcaacctatcctataatcccatcacc
acactagagccatgggccttcaaagacctgctgaggctgaaggagctcattatggtaagc
accgggttgatggcagtggagccacacgccttcggaggcctcagacagattcgggtgctc
aacttctcctccaatgatctgcagactctggaagagggctccttccattctgtcaacagt
ctagagaccctcagagtggatggaaatccactgttgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaattttgacggcagagtgccagtgtgtgcggggccggtg
gaggtgcaaggggtcagcctcagcaccttcaccgattctgcactctttgatcactttaca
tgccagaaacctaagatacgcaaccgtaagatgcagcaggtggtagctcgtgaaggccag
ccagtgagttttctgtgtcgagctgatggagatccaacacctgctatcatctggatttcg
ccacagcgcagacggatcacagccaagaattcaggacgaatcactgttctccccagtggc
acattggagatccgctacgcccagcttactgacagtggaacatacatctgcatcgctagt
aatgctggaggcaatgacacctacttcgccactctgacggtgcgcggccagccgttagat
gccgcctcagccttttttcttaaccgctctctgtacagcggagagttcttcaacgacaca
aatctaaacagcacacgtgttttcctgaagttcaccttggacctgaccaccatcttggtc
tccacagcaatgggttgcattacttttctcggggttgttctcttctgtttcctgctgttg
tttgtgtggagccggggacgcggccaacgcaggaataacttcacagtagagtactctttc
cggaaatctgaaccctcaaccggaagctcttcgggagggaccaggaagttcaacatgaaa
atgatatga
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