Cololabis saira (Pacific saury): 133452634
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Entry
133452634 CDS
T09849
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133452634
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
133452634
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
133452634
NCBI-ProteinID:
XP_061588077
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Position
10:complement(23030336..23064828)
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AA seq
1171 aa
AA seq
DB search
MLNVMDRNEVSPASAATMKKKTAGGSSSGGRGHINSNKAAAAASKCTRSNSGQNGVDSAC
AFAPGGKHPGVMDETEDGEEESKFQHPRLRRAGGSGGGGGGGGGGGGGGGSIRMKNFTPG
GGASSSVSRRNSSKDPCLPHTEDVPAAASRPTAASSSRATDTASAGDAGHQRCHTTASGA
QPPAGAPAEVLNASASDACNVVASVSSMKCNKNGECRRDSGTGSLRSIISKQEKQTAGSG
RGEDGGGAMKRGACNSTSTSMDGSITPGGSLAGGQGGESTHPGVTPGSGGGVPEKKDSKV
SFSNAPSRKASSSLHGPTLGQSQQPRNSVTFLKQEDGPSILPAEDAEPQGSQASFMQRQF
SSMLQPGVNKFSLRMYGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLI
IIPVGITFFKEETTTPWIIFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYL
KTWFIVDFISSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYI
HQWEEIFHMTYDLASAVMRIINLIAMMLLLCHWDGCLQFLVPMLQDFPSDCWVSLNKMEN
DTWAELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQ
SLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILGELSEPLR
EEIVNFNCRKLVASMPLFANAEPNFVTAMLTKLRFEVFQPHDYIIREGTIGKKMYFIQHG
VCSVITKGTLAMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPM
MRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNQENEMIQEIVKYDREMVKLVDL
QRPRAMSMTPSIGGIFAPPGPSNTGSAIATLQQAVAMSFCPQMASPLVGPGTLQSPRMVR
RFQVMQNVSSPVSMSPLQSQPPQTLGGAFGSAISSPPVQSPLTASGRTFQYMASVGPSGS
QLSLVQHHAPSPTQIQQRPVSHKSTHSLHASSLSQDTRALSASQPSLPQEATPQAASASA
APSPPPSTRTSNTSIGPPQPPHHSLPGPSGVGRSAGAQQRVAFASTPAGPAGMGAAAAVG
SGPPDSVVPKKDSIVSLPELDSARSRLSSNL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtcatggacaggaatgaggtctcaccggcgtctgccgccaccatgaaaaag
aaaacagcgggcggcagcagcagcggtggacgcggccacatcaactcaaacaaggctgca
gctgcagcatccaagtgcacgagaagcaacagcggacaaaacggtgtggactccgcttgt
gcattcgcacccggtggcaagcatccaggtgtgatggacgagacggaggacggagaagaa
gagtccaagtttcagcatccgcggttgcgccgagccggggggagcggcggcggaggcggc
ggaggaggaggaggaggaggaggaggcggcagtatcaggatgaagaactttacgccagga
gggggagcctcgtcctcggtttccaggaggaactccagcaaggacccctgccttcctcac
acagaggacgtccctgccgccgcctcgcggcccactgctgcctccagttccagagccacc
gacacggccagtgcgggcgatgctggccatcagcgctgccacaccacagcatccggagcg
cagccgcctgcaggtgcacctgcagaggtcttgaacgcctcagcgagtgatgcatgcaac
gtcgtcgcctcagtttccagcatgaaatgcaacaaaaacggagaatgcaggagggactcc
ggcaccgggagcctgcgctcaataatctccaaacaggagaagcagacggcggggtctggg
agaggcgaggacggagggggtgccatgaagcgaggagcctgtaattccaccagcacaagc
atggacggctccatcacgccgggcggctctctggctgggggacagggaggggagagcacc
caccccggagtcaccccggggtccggcggaggcgtccccgagaaaaaggactcaaaggtg
tccttttccaacgcaccgagccggaaagcctcgtcctcgctgcacggcccgactctgggt
cagagccagcagcccaggaactctgtcactttcctgaagcaggaggatggaccgtcaatc
ctgcccgccgaggatgcggagccccagggcagccaagccagcttcatgcagcggcagttt
agtagtatgctgcagccgggagttaacaaattctccttacgcatgtatggtagtcaaaag
gcggtggaaagggaacaggagagggtaaaatcagctggaaattggattatccacccttac
agcgatttcaggttctactgggattttacaatgctgctgtttatggtgggcaacttaatc
atcatccctgtaggcatcactttcttcaaggaggagaccactacgccttggatcatcttc
aacgtggtttctgatacgttcttcctcatggacctggtgcttaactttcgcactggaatc
ataatagaggacaactcagatataattttggaccctaaaacaattaaaaagaaatactta
aaaacttggtttattgtagacttcatctcctctatcccagtggattacatattccttata
gtggagaaagggatcgactcagaggtgtacaagactgctcgcgccctgaggatagtccgc
tttaccaagatcctaagtcttctgaggctgctgaggctctccagattaatacgctacatt
caccagtgggaagagatcttccatatgacctacgacctggctagtgcagtgatgcggatc
attaacctgattgccatgatgttgctgctgtgtcactgggacggttgcctacaattcctg
gttcccatgctgcaggactttccgtcagactgctgggtgtccctcaacaagatggagaat
gatacctgggcagaactgtactcctttgctgttttcaaggcgatgagccacatgctgtgc
atcggttatggccggcaggcgccggagagtctgtcagacatctggctgaccatgctgagt
atgatagtgggagctacctgctatgctgtttttataggccatgcaacagctctgatccag
tcccttgactcctccagacggcagtatcaagaaaagtacaaacaagtggagcaatatatg
tccttccacaagctgcccgctgacttccggcagaaaatccacgactattatgagcacaga
taccagggcaagatgtttgacgaggagagcatcctgggagaactcagcgagcctctgaga
gaggaaattgtcaacttcaactgtcgcaagctggtggcctccatgccactgtttgccaat
gcagaaccaaactttgtgaccgccatgctgaccaagcttcgctttgaggtgttccaaccc
catgactacataataagggaaggcacgattggcaagaaaatgtacttcatccagcatgga
gtatgcagtgtcatcaccaagggaaccctcgccatgaaactgtccgacggctcttatttt
ggagagatctgtttgttgacgaggggccggcggacagccagtgtgcgagctgagacttac
tgtcgactctactctctgtctgttgacaacttcaatgaagtgctggaagagtatcccatg
atgagacgagccttcgagactgttgccattgaccgtctagaccgcataggtaagaagaat
tccatcctaatgcacaaggttcagcacgatcttaactccggcgttttcaacaaccaagag
aatgagatgatccaggagattgtcaagtatgaccgcgagatggtgaagctggtggacttg
cagcggccacgggccatgtctatgaccccctctatcggtggcatcttcgcccctccaggt
ccatcaaacacaggctctgccatcgccaccctccaacaagctgtggccatgagtttctgc
ccccaaatggcgagtcctttggtgggtccagggactctgcagtctccacgtatggtgcga
agattccaggtgatgcagaacgtgtccagtccggtctctatgtctcctcttcagtctcag
cctccccagactctcggaggggcatttggatctgcaatttcaagcccaccagttcaaagc
ccgctcacagcttcgggacggactttccagtacatggcgagtgtaggaccctcagggtcc
cagttgtccctcgtgcagcaccatgcacccagccccacacagatccagcagaggcctgtc
tcccacaagagcacccactcccttcatgctagcagcctgagccaggacacccgggccctg
tctgcatcgcagccttcgctcccccaggaggcaacgccgcaggctgcgtctgcgtctgca
gctcccagccctccaccctcgacccgcacttccaacacttccatcggccctccgcagccc
cctcaccacagcttgccggggccctcaggggtgggaagatcggcgggagctcaacagagg
gtggcatttgcctccacacctgctggacctgctggaatgggggcagcagctgctgttgga
tcaggacctccagactctgtagttcccaagaaggattcgattgtcagccttccagagcta
gactctgccagatcccggctgtcttccaacttgtga
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