Cololabis saira (Pacific saury): 133452635
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Entry
133452635 CDS
T09849
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133452635 (rnf126)
04121 Ubiquitin system [BR:
csai04121
]
133452635 (rnf126)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133452635 (rnf126)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133452635 (rnf126)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133452635 (rnf126)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
DUF8608
zf-RING_16
HypA
FAR1_N
RING_Ste5
Zn_ribbon_6
Zn_ribbon_Brz
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
133452635
NCBI-ProteinID:
XP_061588078
LinkDB
All DBs
Position
10:complement(23069430..23079949)
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAPPRPCLFFCHRCSAEITPRLPDYTCPHCESGFIEELPEERSSDNVSSSSTSAGDQN
RPFMENTDHQHLFTFPTGYGPFALGIFDENFDLRTRLSTEDNREAENRREREMASRQRYS
ARQPRGRHVPRRQGMRHEGVPTLEGIIQQLVNGIIAPTAMPNIGMGPWGMLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRERIKSLPTISITQEHVSAGLECPVCKEDYSVAES
VRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPELSGMNFSPSSSSSSSPS
SPSNENAASNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcccctccacggccctgcctgttcttctgtcaccgctgctcggcggagatc
acaccgcgtttaccggactacacatgtccacactgtgaatctgggtttattgaggaattg
cctgaagagagaagtagtgacaatgtgtcatcatccagtacctctgccggagatcagaac
cgcccatttatggagaacacggaccatcaacacttattcacatttcccactggatatgga
ccatttgcccttggtatttttgatgaaaactttgaccttcggacgcgattatccacagag
gacaatcgagaggcagaaaacaggagagaaagggaaatggcatcacggcaacgatacagt
gcaaggcagccccggggtcgacatgtacctcgacgacagggaatgcgccacgaaggcgtg
cccacattagagggaattattcagcagctagtaaatggaatcatagcacctacagccatg
ccaaatatcgggatgggaccatggggtatgctacattccaatccaatggattatgcctgg
ggtgccaacggactcgatgctatcatcacacagttattaaaccaatttgaaaatactggt
cctcctcctgcagacagagaaagaataaagagtttgccaacaatttccatcacgcaagaa
cacgttagtgctggtttagagtgtcccgtatgcaaagaagactacagtgtcgcagagagt
gttaggcaactaccatgcaatcatttgtttcataatgactgtatagtaccgtggctggag
cagcatgatacgtgtcctgtgtgccgaaagagtcttagtggacagaacactgccacagac
ccaccagagttatcaggaatgaacttctctccctcttcctcctcttcatcctccccaagc
tcccctagtaatgagaatgctgccagcaactcatag
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