KEGG   Cololabis saira (Pacific saury): 133452653
Entry
133452653         CDS       T09849                                 
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133452653 (prpf38b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csai03041]
    133452653 (prpf38b)
Spliceosome [BR:csai03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    133452653 (prpf38b)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    133452653 (prpf38b)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 133452653
NCBI-ProteinID: XP_061588128
LinkDB
Position
10:23455569..23465324
AA seq 492 aa
MAGNQLAAQAVSKPASGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHE
VVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQ
LMGLITHTDSPYIRALGFMYIRYTQPPTDLLEWYDGFLDDEEELDVKAGGGCVMTVGEML
RSYLTKLEWFSTLFPRIPVPVQKQIDQQMKARPRKIAQKETPEEDATATESGRQVERRRS
RSPRRSPSPRRSPKRSPKRSPKRSPKRSPKRSPKRSPKRSRSRSHHHEKDHHGPSFDREL
ERERDRQRKERDRGDRGDRERRRSRSADRERRRSRSVDRNQDRRERKKSRSGSRDRRSER
KEKDRDGGDDRIRKKDRDHHKDRGTESEKSKDKKNRGETDERRHKEDRERHREDKKSKRS
SRSKSRDRKHRSGGEDKSRRRERSHSRERDRERDGEQRSHKRSRSKDRSHHQRETSNDHS
KHSERRRSRSTE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggccgggaaccagctggcagcgcaggccgtgagcaagcccgcctcagggaaacatggc
aacgtactgcccctgtggggcaacgagaagaccatgaacctcaaccccatgatcctcacc
aacgtactctcctcgccctacttcaaagtgcagctctacgagctcaagacctaccacgaa
gtggtggacgaaatctatttcaaggtgactcatgttgagccctgggaaaaaggaagcaga
aagacagcgggccagactggaatgtgcggaggggtgcgtggagttgggactggcggaatt
gtatctactgctttttgtcttctttacaaactgtttactctcaagcttactcgcaaacaa
ctgatgggtctcatcacacacacagactcgccatacatcagagcacttggattcatgtac
ataagatacactcagcccccaacagatttactggagtggtacgatggtttcctggatgat
gaggaggagcttgacgtaaaagctggtggaggctgtgtaatgaccgttggagagatgctg
cgctcatacctaaccaaactggaatggttttccactctgttcccccgcatcccagtccct
gtgcagaagcaaattgaccagcaaatgaaggcacggcctcggaaaatagctcagaaggaa
acaccggaggaagatgctaccgccacagagtccggaagacaagtagaacgccgccgctct
aggtcacccagacggtcaccgagcccaaggcggtctcccaagcggtctcccaaacggtcg
cccaaaaggtcgccaaagcggtctcccaaacgatcgcccaaacgctcacccaaacggtca
aggagcagaagccaccaccacgagaaagatcaccacggtcccagctttgatcgtgagctg
gagagggagcgggaccgtcagaggaaggagagggaccgaggggacagaggggacagggaa
cggcggcggtcccgtagcgcagacagggaaagacgacgatcgcgcagcgtagacagaaac
caagatcgacgagaacgcaaaaaaagtcgcagcggcagccgggaccggaggagcgaacgc
aaggagaaggacagagatggaggggatgacaggatcaggaagaaagatcgggaccatcac
aaggatagaggcacagagagcgaaaagtccaaggataaaaagaacaggggagagactgat
gagcgaaggcataaagaggatagggagaggcacagggaagacaagaagagcaagaggtcg
agccgcagcaaaagtcgagacaggaagcatagaagtgggggagaggacaagagcaggaga
agagagcgcagccacagcagagagagggacagggagagggatggagagcagcgctctcac
aaacgcagccgtagcaaagacaggagccatcatcagcgagagaccagtaacgaccacagt
aaacatagtgaacgcagaaggagtcggagcactgagtaa

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