Cololabis saira (Pacific saury): 133452653
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Entry
133452653 CDS
T09849
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133452653 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133452653 (prpf38b)
Spliceosome [BR:
csai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133452653 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
133452653 (prpf38b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
133452653
NCBI-ProteinID:
XP_061588128
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All DBs
Position
10:23455569..23465324
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AA seq
492 aa
AA seq
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MAGNQLAAQAVSKPASGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTYHE
VVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQ
LMGLITHTDSPYIRALGFMYIRYTQPPTDLLEWYDGFLDDEEELDVKAGGGCVMTVGEML
RSYLTKLEWFSTLFPRIPVPVQKQIDQQMKARPRKIAQKETPEEDATATESGRQVERRRS
RSPRRSPSPRRSPKRSPKRSPKRSPKRSPKRSPKRSPKRSRSRSHHHEKDHHGPSFDREL
ERERDRQRKERDRGDRGDRERRRSRSADRERRRSRSVDRNQDRRERKKSRSGSRDRRSER
KEKDRDGGDDRIRKKDRDHHKDRGTESEKSKDKKNRGETDERRHKEDRERHREDKKSKRS
SRSKSRDRKHRSGGEDKSRRRERSHSRERDRERDGEQRSHKRSRSKDRSHHQRETSNDHS
KHSERRRSRSTE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaccagctggcagcgcaggccgtgagcaagcccgcctcagggaaacatggc
aacgtactgcccctgtggggcaacgagaagaccatgaacctcaaccccatgatcctcacc
aacgtactctcctcgccctacttcaaagtgcagctctacgagctcaagacctaccacgaa
gtggtggacgaaatctatttcaaggtgactcatgttgagccctgggaaaaaggaagcaga
aagacagcgggccagactggaatgtgcggaggggtgcgtggagttgggactggcggaatt
gtatctactgctttttgtcttctttacaaactgtttactctcaagcttactcgcaaacaa
ctgatgggtctcatcacacacacagactcgccatacatcagagcacttggattcatgtac
ataagatacactcagcccccaacagatttactggagtggtacgatggtttcctggatgat
gaggaggagcttgacgtaaaagctggtggaggctgtgtaatgaccgttggagagatgctg
cgctcatacctaaccaaactggaatggttttccactctgttcccccgcatcccagtccct
gtgcagaagcaaattgaccagcaaatgaaggcacggcctcggaaaatagctcagaaggaa
acaccggaggaagatgctaccgccacagagtccggaagacaagtagaacgccgccgctct
aggtcacccagacggtcaccgagcccaaggcggtctcccaagcggtctcccaaacggtcg
cccaaaaggtcgccaaagcggtctcccaaacgatcgcccaaacgctcacccaaacggtca
aggagcagaagccaccaccacgagaaagatcaccacggtcccagctttgatcgtgagctg
gagagggagcgggaccgtcagaggaaggagagggaccgaggggacagaggggacagggaa
cggcggcggtcccgtagcgcagacagggaaagacgacgatcgcgcagcgtagacagaaac
caagatcgacgagaacgcaaaaaaagtcgcagcggcagccgggaccggaggagcgaacgc
aaggagaaggacagagatggaggggatgacaggatcaggaagaaagatcgggaccatcac
aaggatagaggcacagagagcgaaaagtccaaggataaaaagaacaggggagagactgat
gagcgaaggcataaagaggatagggagaggcacagggaagacaagaagagcaagaggtcg
agccgcagcaaaagtcgagacaggaagcatagaagtgggggagaggacaagagcaggaga
agagagcgcagccacagcagagagagggacagggagagggatggagagcagcgctctcac
aaacgcagccgtagcaaagacaggagccatcatcagcgagagaccagtaacgaccacagt
aaacatagtgaacgcagaaggagtcggagcactgagtaa
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