Cololabis saira (Pacific saury): 133452686 Help Entry 133452686         CDS       T09849                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism csai  Cololabis saira (Pacific saury) Pathway csai04510   Focal adhesion csai04512   ECM-receptor interaction csai04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:csai00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     133452686  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     133452686   09142 Cell motility    04820 Cytoskeleton in muscle cells     133452686  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:csai04147]     133452686    00536 Glycosaminoglycan binding proteins [BR:csai00536]     133452686 Exosome [BR:csai04147]  Exosomal proteins   Exosomal proteins of other cancer cells    133452686 Glycosaminoglycan binding proteins [BR:csai00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    133452686 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  133452686 NCBI-ProteinID:  XP_061588211 LinkDB All DBs Position 10:24969610..24998628 Genome browser AA seq 1667 aa AA seqDB search MGRPVIILPLILIFVMLMMTEGKNCVCSGKSRCHCKGVKGSRGDRGFPGDQGPPGPKGHP GSMGHPGSMGPKGNTGRDGPTGPKGDPGTEGKEGFAGSHGLPGIPGLQGPTGLPGFSGCN GTDGDKGPRGAPGAPGPYGQPGLPGLPGQKGNSWVVPHAKPGPPGTPGKSGDHGHPGSPG EQGQSGDHGLRGPNGLQGHLGSTGSKGQEGTSGAPGRQGQKGRQGPPGPPGPPGRIKDYF SGSLVLKGLKGDKGNPGVKGCKGDQGDPGYGHLTKGTKGDRGPPGPEGKLGKDGDVGHPG VRGKSGPRGSPGYPGTPGDWGEKGDRGRTGPPGAAISLQPLKGYIGDPGLPGIPGYPGLP GSIGFPGPPGPPGDSHGFIAPGPPGSPGFPGPRGDPGESGGVYTGPPGPDGDSGDKGPPG DRGPPGPPEDRTNRTTRGLPGMKGMKGFPGPSGHIGSFGKKGEKGEACYECNALGTPGQP GSRGPPGIPGTVQGPGEKGDQGFPGPKGLPGQPGPIGFIGFPGPSGQKGDSYSYGSPGLK GGKGDPGYPGRHGEGGIPGPPGLPGKRGNKGLPGDSYHFPGGEGDRGFPGQSGPIGEPGP VGYDGRVGDGPPGFQGIKGDPGVPGLLGEPGHPGQKGESCCLNPKGPAGPPGFIGVPGLP GSPGHQGVPGIPGKPGFQGEKGEKGVHPGRTGLRGEKGDKGQPGLPGAPGRGFHGKSGPQ GPPGPPGEKGDSGVGIPGLPGPPGPSGEVGAPGPAGDPGIPGFPGNPGRSGKPGFPGEKG RMGSVGPPGLPGTKDSCVGLPGPEGLPGPDGSPGHPGDNGAPGQKGDPGVPGYGHPGPPG EPGFPGLSIPGSPGHPGQKGAEGQNGLPGRPGTRGDPGHDGLPGSGSEGLPGAVGPPGPR GDPGPDGSKGVQGFPGFKGDPGPSGPVGPPSPPLNVTGLPGDPGEPGQPGLPGVYGDPGS DGLKGQDGRLGPPGSPGQRGPPGDPGVEVTVPSPGIRGPPGAPGAAGPWGHPGLKGIKGD PGIPGSPGPAGVPGSTGYKGVVGEPIYGYGPPGPMGQKGEPGPRLGFLKGQKGAPGIEGL VGLPGIRGTSGDPGLPGRNGSPGYQGPTGANGPPGGKGYPGPNGLKGSPGPTGNRGVPGQ KGNQGQDGFPGPPGQKGDTVIVAGTPGKQGEPGPPGPPGSIGAPGLSVPGYPGAGGERGS PGLPGIFGSKGQPGRHGACIPGPKGDPGFSGNTGSRGYPGPPGLPGPTVPGSKGETGGPG PSGSPGNRGTPGDPGPQGPPGPTGITGGPGPRGDPGPPGEHGFPGDVGDPGYIPGPCGPP GTKGFPGPPGLKGDPAFVGRTYLPGSPGLPGPPGNRGPPGPPGLSGRPGPPGQPGVKGSP GISPLGPPGFTGHKGDKGTTGIPGPEGRHGNPGHKGRPGLPGKAVPGYVDSFLIARHSQT IRVPGCPSGSSLIYSGYSLLFINGNERVHGQDLGTMGSCLPRFSTMPFLFCDTERTCRYA SRNDYSYWLSTDKPMPTNMVAITADNLAPYISRCSVCEIPSNVIAIHSQTTKVPECPRGW ESLWSGYSFVMQTGAGAEGSSQPLISPGSCLEHFRQVPFIECHGRGTCNYYPDSYSYWLA SLDPNNMFSKPAPQTVKGLSSQSIISRCQVCRKTLQSAESDKRGDSF NT seq 5004 nt NT seq  +upstreamnt  +downstreamnt atgggaaggccagtgatcatacttcctctgatcctaatttttgtgatgctgatgatgaca gaagggaaaaattgtgtgtgcagtggaaaatcaagatgccactgtaagggagtaaaaggc agtcggggagaccgaggttttccaggagatcaaggtcctcctggaccaaagggccatcca ggttccatgggtcatcctgggtcaatgggaccaaagggcaacactggacgtgacggaccc actggaccaaaaggcgatccaggaacagaaggcaaagaaggatttgctgggtctcatgga ttaccgggtattccaggattacagggtcctacaggactaccagggttctcaggctgcaat ggaacagacggagataaaggacctcgcggtgctcccggtgcccctggtccttatggacag ccaggtcttccaggtttacctggacaaaagggtaactcttgggtagttcctcatgcaaag ccggggccacctgggacaccggggaaaagtggagatcatggacatccaggttcccctgga gaacaagggcaaagcggtgatcatggactaagaggacctaatgggttgcaaggccatctg gggtctacaggatctaagggtcaagaaggtacaagtggtgctccaggacgtcaaggacag aaagggagacaaggcccacctggcccacctgggccaccagggaggattaaagattatttc tcaggcagtctggtcttaaagggtctgaaaggagacaaaggcaatccaggagtcaaaggc tgcaagggtgaccaaggagaccctggttatggccatctcacaaaaggaacaaagggagat cgaggacccccgggcccagaaggaaaattggggaaggacggcgatgtaggacatcctggt gttaggggaaaatctggtccaagaggtagtccaggatacccagggacaccaggagactgg ggtgaaaagggagacaggggtcgtactggcccaccaggagctgcaatttcacttcagcca ctcaagggatacattggagatcccggtcttccagggatccctgggtacccaggtcttcca ggttctattggatttcccggaccacctggacctccaggtgattcacatgggtttattgcg ccaggcccacctggttcccctggctttccaggaccaagaggagaccctggagagtcagga ggtgtttacacaggccctccaggcccagatggggattctggtgacaaagggcctccagga gaccgaggtccacctgggccccctgaagacagaactaacaggactactaggggccttcct ggaatgaagggaatgaaaggttttccaggaccttcaggacatattgggtcatttggaaag aaaggagagaagggggaggcttgttatgaatgtaacgcattaggaacgccaggacaaccg ggttcccgtggtccacctggtattcccggcaccgttcaaggaccaggtgagaaaggtgac caaggctttccaggacctaaaggtttacctggacaaccaggtcccattggtttcatagga ttcccaggcccttcaggacaaaagggagactcatattcctatggatctcctggattaaaa gggggaaaaggagaccctggataccccggcagacatggtgaaggtggtatccctgggcct cccggattgccagggaaaagaggcaataaagggcttccaggggattcgtatcattttcct ggtggagagggagaccgtggatttccaggtcaatcaggacctatcggcgaacctggacca gttggctacgatggcagagttggagacggacctcctggattccaagggatcaaaggagat cctggggtacctggcctgctaggagagcctggacatccgggccaaaaaggggaatcttgt tgtctaaaccccaaaggacctgcaggaccacctggatttataggtgtgcctggtttacca ggaagcccagggcaccagggggtaccaggcatcccaggaaaaccaggttttcaaggagaa aaaggagaaaaaggggtgcatccaggaaggacaggtctccgaggagaaaagggagataag gggcaaccaggtcttccaggtgctccaggtagaggttttcatgggaaatcaggtccacaa ggcccgcctggtcctccaggagaaaagggtgatagcggagttggaatccctggccttcca ggcccaccagggccctcaggtgaagttggagctccaggaccagcaggtgatcctgggatt cctggtttccctggaaatccaggacgaagtggaaaacctggctttccaggagaaaaggga agaatgggttctgtaggccctccaggattgcctggtaccaaagattcatgtgtaggattg ccaggaccagaaggactgccagggccagatggctctccaggacatccaggagacaatggg gcacctggtcaaaagggagaccctggtgtgcccgggtatggtcatccaggtcctcctggt gaaccaggtttccctggtttatcaatccctggttcaccagggcatcctggacaaaaaggt gcagagggacaaaatggcctgcctggtcggccaggaaccagaggagaccctggtcacgat ggattaccaggatctggatctgagggattgcctggagctgtagggccacctggcccaaga ggggatcctggcccagacggcagcaaaggtgtccaaggttttccaggtttcaaaggggac ccaggccccagcggtcctgtagggcccccatccccaccactaaacgtaacagggctacca ggggaccctggagagccaggtcaacctggtctgcctggtgtatatggtgatcctggaagc gatggactaaaggggcaagacggaagactaggaccaccagggagtcctggacaaagaggc ccccccggtgatccaggtgttgaggtaactgtaccttcaccaggaattcgtgggccacct ggagcaccaggggccgcaggaccctggggccatccagggctcaaaggtataaaaggagat ccagggatccctggaagtccaggaccagctggtgttcctggttcaactggttacaaagga gttgtaggagaaccaatctatggatatggaccacctggcccaatgggacaaaagggtgaa ccaggacccagacttggattcctaaaaggtcagaagggagcacctggtattgagggtctt gttggcctaccaggaatccgcggaaccagtggagatccaggactccctggaagaaatggt tcaccaggctatcaaggcccaacaggtgcaaatggccctccaggagggaaaggataccca ggacctaatggactcaaaggtagcccaggccccacaggtaataggggtgtacctggtcaa aaaggaaaccagggccaagatggattccctgggccaccagggcagaaaggggacaccgtc atagttgccggaacaccaggaaagcagggtgagccaggaccgccaggtcctcctggaagc attggtgccccgggtttatctgtcccaggatatcctggagcaggaggggaaagaggatcc ccaggtctacctggcatctttggttcaaaaggacaaccaggaagacacggagcatgtatt cccggccccaaaggagatcctggattctcaggaaatactggaagcagaggctatcctggt ccacctggccttccaggtcccactgtaccagggtccaaaggagagacaggtggcccaggt ccttcaggaagcccaggtaaccgtggcaccccaggagatccaggcccccaaggaccacct ggtcccacaggcataacaggaggcccaggaccaagaggagatcctggccctcctggagaa catggcttccctggtgacgtgggagaccctggatacatcccaggtccatgtggtccacct gggaccaagggatttcctggacctccaggcctcaaaggtgatccagcatttgttggacgg acatatctaccaggatcccctggtttacctggtccccctggcaaccgaggacctccagga cctcctgggctatcaggacgacctggccctccaggtcagccaggtgtcaaaggaagcccc ggaatcagccccctcggcccacctggatttactggtcacaaaggagacaagggaacaaca ggaatcccaggtccagaaggcagacatgggaacccagggcacaaaggccggccaggtttg cctggtaaagcagttccaggttatgttgacagttttctgatagccaggcacagtcagacc atccgtgtccctggctgccccagtggctcaagtcttatctactccggttattccctcctc ttcatcaatggaaatgagagagttcatggtcaggatctcggcaccatggggagctgtctg cctcgtttctccaccatgcccttcctattctgcgacacagaaagaacatgtcgctatgct tcacgtaatgactactcatactggctttcaacggacaaaccaatgccgaccaacatggtt gccatcacagcggacaacctggccccttacattagcaggtgttcagtgtgcgaaatcccc tccaatgtcatcgccatccacagccagacaactaaggtacctgaatgtcctagaggctgg gaatccctttggtctgggtactcatttgtcatgcaaacgggtgccggggcagaaggatcc tcccagccccttatatctcctggctcatgtttggaacatttccgtcaagtgccctttatt gagtgtcatggcagagggacttgtaactactaccctgattcctacagctactggctggcc tctcttgacccaaacaacatgttcagtaagccagctcctcagacagtaaagggactttct tcgcagagtatcatcagccgttgtcaagtttgcagaaaaacattacaaagtgctgaaagt gacaaacgtggagacagtttttga

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