Cololabis saira (Pacific saury): 133452704
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Entry
133452704 CDS
T09849
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133452704 (tnn)
04518 Integrin signaling
133452704 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133452704 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133452704 (tnn)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133452704 (tnn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_PBP1
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Interfer-bind
Arylsulfotran_N
DUF4249
DUF460
DUF7949
EGF
Motif
Other DBs
NCBI-GeneID:
133452704
NCBI-ProteinID:
XP_061588243
LinkDB
All DBs
Position
10
Genome browser
AA seq
1121 aa
AA seq
DB search
MTTRLLWRALCLLGLLCSLTVSVSSTDNQPESSTSEQELTFSHVYKIDIPGNSGCTLERL
QSTDETGLQKDRTVNGENDIVFKHNIRLQPPKCDCDESENFKSLLYRVNGLEEEVNYLKT
QCTQGCCGKGGAAGVDTSCSGHGTYQGDTCSCLCNPGWEGPDCSVSSCPDECNDNGRCVD
GRCVCHQGYTGEDCSQLMCPNNCNDKGQCVDGKCVCFAHFTGEDCSIPACPNDCGGSGQC
VDGQCICEEGFFGEDCTLVFGPQGLRLVQVTDISLLVEWESVPGAEYYVLTYHPKYDEGA
MEKIQISNTENSYLITGLIPGVTYVVQVYTVIKSIQSEADVIEATTDVSTIDDMRVLGQT
EVSIQVDWKNPPAEVDYFRLTHTDPSGQEEELNVRSSQEARTKHTIVGLYPGTEYQISVQ
AIKGNTEGKASSATGVTDIDAPNNLVTTEVTEDTIRVSWDRVQADIEGYMLSYISADGSS
PEIPVGRDSTSYKLVGLRPGVLHTVYIWAFHGDRVSAKSSTEAETELDAPTNLLVQEETE
SSFRVNWDPTQAEIDGYMLTYSSSEGLSEEIPVGSDSTSYMLTGLRPGVVYTIYVWAIKG
SKASKKTSTQAETELDAPANLFAQDETQSSFRVTWDPVQAEIDGYILTYSFPGGSSEEVS
VGPDSSSYTLTALRPGVLYTVFIRAIKGSKSSKTVSTQAETELDAPANLLARDETESSFT
VSWEPVQAEIDGYILTYSSSAGSSEEIPIGPRMTSYLLTSLRPGLLYTVYVWAIKGEKRT
EKISTEAETDIDSPKDLKASDVRADSASLTWTAPLADIDGYVLTFRDEDGNMETVERQLG
GRENSFIASSLETGKRYIVTIVAYRGYKRSRVVETVFTTVGLLYPFPMDCVQILKNGNKK
SGIYTIYINNVRSKPIEVFCDMDTDGGGWLMLQRRNSGKLDFMKRWRQYIAGFGNMTDEF
WIGLDHIYELTNTPTQYELRFDLGLGSERVYAVYDNFKIAPVRQKFKLTIGKYRGNAGDA
MTYHDNRPWTTVDSDNDIALGNCALTHRGAWWYKNCHLANLNGKWGDSRHSGGVNWEPWK
GHLTSLDFTEMKIRPLGAMSSRKRRSPMAREKSRSSNAHKK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagacttctatggagggccctgtgcttactgggcctactatgcagcctgact
gtcagcgtgagctccacggacaatcagccagaatcgtcaacctcagagcaagaactcacc
ttcagccacgtctataagattgacatccctgggaactctggctgcacacttgaacgcctg
caatccacagatgaaacaggtcttcagaaggacaggacagtaaatggagagaatgacatt
gtcttcaaacacaacattcggcttcagccaccaaagtgcgattgtgatgagtcggaaaat
ttcaagtctctgttgtacagagtcaatggactggaagaagaagtgaactacttaaaaact
cagtgtactcagggatgctgtggaaaaggaggtgctgcaggtgtagacacaagctgtagt
ggccatggtacttatcaaggtgacacctgcagctgcctgtgcaacccgggatgggaaggc
ccagactgctctgtgtcctcctgcccggatgagtgcaacgacaacggccgatgcgtagac
gggagatgtgtgtgccatcaaggctacacgggagaagactgcagccagctgatgtgtccg
aacaactgcaatgacaagggacagtgcgttgatggaaaatgcgtgtgcttcgcacatttc
actggtgaggactgcagcatcccagcgtgccctaacgactgcggtggcagtggccagtgt
gtagatggccagtgcatctgtgaggaaggcttttttggggaagactgcaccttagtcttc
ggaccccaaggtctgcggttggtccaggtgactgacatctctctcctggttgagtgggaa
tctgtcccaggggcagaatattatgtgttgacatatcatcccaaatatgatgagggtgcc
atggagaagattcagatttccaacacagagaactcctacctcatcacgggactgattcca
ggggtgacctacgtggtccaagtgtatactgtcatcaaaagcatccaaagtgaagcagac
gtgattgaagccaccacagatgtctccactattgatgatatgcgagtgcttggccagaca
gaggtctctatccaagtggactggaagaacccgccggctgaagtggattattttaggctt
acacacactgacccgtcgggacaggaggaggagctgaatgtacggagcagccaggaggca
cgcaccaaacacactatcgtaggtttgtacccaggaactgagtatcagatctccgtccag
gccatcaaagggaacacagaggggaaggcttcttctgccacaggtgtcacagacatcgat
gctccaaataacctggtcaccactgaagtaacagaagacactataagagtgtcctgggac
cgggtccaggctgacatagagggctacatgctgagctacatctctgctgatggatccagt
ccagagatcccagtaggacgtgacagcacctcatacaagctggtgggcttgaggcccggc
gtgctccacaccgtctacatctgggccttccatggggacagagtcagtgcgaagagttca
actgaagctgaaacagaactggatgctcccactaacctcttggtgcaagaagagacagag
tccagcttcagggtaaactgggatcccacacaagcagaaattgatggatacatgctgact
tatagctcttctgagggcttgagtgaggaaatcccagttggatctgacagtacatcatat
atgctgaccggcctgaggccgggggttgtctataccatctacgtctgggccatcaagggg
agcaaagcaagcaagaagacgtcaacgcaagctgagacagaactggatgctcccgctaac
ctctttgcccaagatgaaacacagtccagcttcagggtgacatgggatccagtccaggca
gaaattgatggctacatcctcacctactccttccctggtggttctagtgaagaagtgtct
gtggggcctgatagcagctcctatactctgactgctttgaggcctggagttctctacact
gtctttatcagggccatcaaggggagcaaatccagcaagacggtctcgacacaagctgag
acagaactggatgctcctgctaacctcttagctcgagatgaaacagagtccagcttcacc
gtgtcctgggagcctgtccaagcagaaattgatggttacatcctaacctatagctcctct
gcgggctcaagtgaagaaatccccatcgggcctcgcatgacctcttacttgctgacaagc
ctgaggcctggattgctgtacacggtctacgtctgggccatcaagggggagaaaaggacc
gagaagatttccacagaagctgagacagatatagattcaccgaaggacctgaaggcttcg
gatgtgagagcggactctgcgtctttgacttggactgctcctctggcagacatagatggt
tatgtcctcaccttcagagatgaagatggtaacatggagactgttgaaaggcagcttgga
ggcagagagaacagctttattgcatccagcttggagacagggaagcggtacatagtgacc
attgttgcctacagaggctacaagaggagcagagtggtggagaccgtcttcacaacagtt
ggtctgctctaccccttccccatggactgtgttcagatactgaagaacggcaataaaaag
agtggcatctacaccatctacattaacaacgtccgctccaaacccattgaggtcttttgc
gacatggacactgatggaggcggctggctgatgcttcagcgccgtaattctggcaaactg
gacttcatgaaacgctggaggcagtacatcgcaggttttggcaacatgacagacgagttc
tggattggtttggatcatatctatgagctaacaaacactcccactcagtatgaactgagg
ttcgacttgggcctgggctcagagagggtctacgctgtttatgacaactttaagattgca
ccagtgaggcaaaagttcaaactcactattggcaaatacagagggaacgcaggtgatgct
atgacctaccacgataaccggccctggacaaccgttgattcagataatgacatcgccctg
ggcaactgtgccctgacccaccgcggagcctggtggtacaaaaattgtcacttggccaac
ctcaacggaaaatggggtgatagcaggcacagcgggggagtgaactgggaaccatggaag
ggccatctaacgtccctcgacttcaccgagatgaagatccgacctctgggagccatgtcc
agccggaagaggcgatctcccatggccagagagaaaagcagatcctcaaatgcccacaag
aaataa
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