Cololabis saira (Pacific saury): 133452745
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Entry
133452745 CDS
T09849
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133452745 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133452745 (ss18)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133452745 (ss18)
GBAF(ncBAF) complex
133452745 (ss18)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
133452745
NCBI-ProteinID:
XP_061588331
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All DBs
Position
10:complement(26991519..27004762)
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AA seq
380 aa
AA seq
DB search
MSVAFAPHRQRKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVYL
ATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPQQPPHGHNMPSEGMVSGAPAPHMQN
QMNGQMPGPNHMPMQGPGPGPNQPPNMPSGSMNMPPSSHGSMGGYNHAVPSSQGIPAQSQ
MNMTQGQPMGNYGPRPSMNMQPTQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMMGQ
VNQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYGQQQEAYQ
QGPPQQQAYPPQQQYPGQQGYPPQQQGYGPSQSAPGQYPNYPQGQGQQYGGYRPPQPGPP
QGQQQRPYGYDQGQYGNYQQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacaggcaaaggaaaggagacatcacccccgcaggaatc
cagaagctacttgatgaaaacaaccagctgatccagtgtataatggacttccagagtaaa
ggcaaaacagcagagtgttcacagtatcaacagatgctgcacagaaatctagtgtacctg
gccacgatagcagactccaatcagaacatgcagtctctcctgcctgctccaccgactcaa
aatatgcccatgggccctggtggcatgaaccaaagtggaccccctcaacagccccctcat
ggccacaacatgccctctgaggggatggtcagtggtgctccagccccccatatgcagaac
cagatgaatgggcagatgcctgggcccaatcacatgcccatgcaaggtcctggtccaggc
cccaaccagcccccaaacatgcctagtggctctatgaatatgccccccagcagccatggc
tccatgggtggatacaatcacgcagtcccttcctcccagggcattccagctcagagccaa
atgaatatgacccagggtcaaccaatgggaaattatggacctcgaccaagcatgaacatg
cagccaactcaaggcccgatgatgcatcagcagcctccatcacagcagtataacatgcct
cctggtggtggtggacagcactatcaaggacagcagaatcccatgggcatgatgggccag
gtcaaccaagggaaccatgtcatgggacagaggccgatgccaccctacagacccccacag
caaggaccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcac
gcaggacagggggcctcagaaggtaatgcccagtatggtcagcaacaggaagcgtaccag
caaggcccgccacagcagcaggcctatcctcctcagcagcagtacccaggtcagcagggc
tacccgcctcagcagcagggctacggtccctcccaaagtgccccaggacagtaccctaat
tatccccaggggcagggacagcagtatgggggctaccgcccccctcaacctggaccccca
cagggccaacagcagcgcccttatggttacgaccagggccagtatggaaattaccagcaa
tga
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