Cololabis saira (Pacific saury): 133452752
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Entry
133452752 CDS
T09849
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133452752 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
csai03029
]
133452752 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
csai04031
]
133452752 (rhot1b)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
133452752 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
133452752 (rhot1b)
GTP-binding proteins [BR:
csai04031
]
Small (monomeric) G-proteins
Rho Family
Miro
133452752 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_7
RsgA_GTPase
EF-hand_6
EF-hand_1
Arf
Dynamin_N
MMR_HSR1
AAA_22
Septin
AAA
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
133452752
NCBI-ProteinID:
XP_061588386
LinkDB
All DBs
Position
1:6238534..6282523
Genome browser
AA seq
619 aa
AA seq
DB search
MRKDVRILLVGESKVGKTSLIMSLVSEEFPEVVPYRAEEITIPADVTPERVPTHIVDYSD
AEQTDEQLFQEISKANVICIVYAVNNKKSIEKVTSHWIPLITENTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEKKD
MKPLCVKALTRIFKVSDLDNDGVLNDGELNFFQRTCFNAPLEPQALEDVKSVVRKNLVDG
VCDSGLTLTGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELNQDYLFPPLKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEELKDLFDVFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIIAEQESQAAGITVTRDKKIDLQKKQTQRSVFR
CNVFGDVGSGKSGFLQAFLGRNLMRQNAIKDEHRSYYAISTTYVYGQEKYLLLHEVFPDF
DYLSDDDLCCDIVCLVYDVSNPYSFEYCAKVFKQYFMDSKTPCMMIAAKSDLPEVKQVYG
CSPLEFCRRHKMPPPQSFTCSAAGDPCRDIYTKLTTMAMYPHMSQADLKSSTFWLRASVG
ASVFAALGFAMYRVLLKTR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatattactggtgggagaatccaaggtggggaagacgtcgctc
atcatgtccctggtcagcgaggagttcccggaagtggtcccctaccgagccgaggagatc
accatccccgccgacgtcacgccggagagagttcccacgcacatcgtggactattcagac
gcggagcagacggacgagcagctgttccaggagatctccaaggcaaatgtcatttgcatc
gtctacgccgtcaacaacaagaagtccatagagaaggtgaccagtcactggatccctctc
atcactgagaacacagacaaggacagcagggttcctctgatcctggtggggaacaagtcg
gacctggtggaacacagcagcatggagaccattctgcccatcatgaaccagtacagcgag
atcgagacctgcgtggagtgctccgccaagaacctgaagaacatctcggagctgttctac
tacgcccagaaggccgtgctgcaccccacgggcccgctgtactgccccgagaaaaaagac
atgaagcctctctgcgttaaagctctgactcggatcttcaaagtgtcggacctggacaac
gacggcgtcctcaacgacggcgagctcaacttcttccagcggacctgcttcaacgctccg
ctggagccgcaggcgttggaggacgtgaagagcgtggtgaggaagaacctggtggacggc
gtctgcgacagcggcctcactctgacaggtttcctgttcctgcacacgctgttcatccag
cgaggacgacacgagaccacctggaccgtgctgcgcaggttcggctacgacgacgacctg
gagctcaaccaggactacctgttccccccgctgaagattcctccagactgcacgaccgag
ctcaaccacaacgcctacctcttcctccagagcgtctttgacaaacacgacaaggaccgt
gactgtgccttgtcacccgaggagctgaaggacctgtttgatgtgtttccctacatgccc
tggggccccgatgtcaataacaccgtctgcactaacgagcagggctggatcacctaccag
gggtatctctcccagtggacgttgacgacttatctggatgtccagcgatgtctggagtat
ttaggttacctcggttactcaataatcgccgagcaggagtcacaggcagcaggaataaca
gtgaccagagataagaagattgacctgcagaagaagcagacgcagcgcagcgtcttccgc
tgcaacgtctttggagacgtaggaagcgggaagagcggcttcctccaagctttcctgggt
agaaacctcatgcggcaaaacgcgattaaagacgagcaccggtcctactacgccatcagc
acaacctacgtctacggccaggagaagtacctgctgcttcacgaagtgttccccgacttc
gactacctgtccgacgacgacctgtgctgcgacatcgtctgcctggtttatgacgtcagc
aacccgtactccttcgagtactgcgccaaagtcttcaagcaatacttcatggacagcaag
acgccgtgcatgatgatcgcggccaagtcggacctgccggaggtgaagcaggtgtacggc
tgcagcccgctggagttctgcaggaggcacaagatgccgccgccgcagtccttcacctgc
agcgcagcgggcgacccctgcagggacatctacaccaaactcaccaccatggccatgtac
ccacacatgagccaggccgacctgaagagctccaccttctggctgagggcgagcgtcggg
gcctcggtgttcgccgcgctgggcttcgccatgtacagagtgctgctgaaaacgcggtga
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