Cololabis saira (Pacific saury): 133452823
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Entry
133452823 CDS
T09849
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133452823 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133452823 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133452823 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133452823 (rb1cc1)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133452823 (rb1cc1)
Membrane trafficking [BR:
csai04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133452823 (rb1cc1)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133452823 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
133452823
NCBI-ProteinID:
XP_061588465
LinkDB
All DBs
Position
10:complement(29776025..29798858)
Genome browser
AA seq
1632 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFNAAYTNYQQ
DLEEIKVKLSKLGTAVAVMARIPLLECLTRHSYRESIEKSSSTPDKDSEETEGEKSTDSV
LCNTQAQIPSKSSASLSASGKASSEQDGDQETNEMTDSGGLRAALLDDNTPEATNPSSFN
VTLLDWINVQDRPHDVESVVRKCFDSINRLDPRIIQPFLTDCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDAEKLQALLRLLTELLERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRKFDDELPDISVDDLQYLKSCCPVEVQPFLLPGGGSR
WPIQWIPTMCDFEPLNRHVETLHQLVQAAQSVDEMSQTITDLLSEQRACCSQRSAASTPR
SGSMPGTTTPLSSRTPLSLSLQGASCQALHVHVPAPLEDLSPDSIDAQTFDFETIGHPNM
DPVLQQVSLDLDSLAESPESDFMSAVNEFVIEENLISPNPISDPISPEMMVESLYSSVIN
AIDSKRMQDTTILEKENSRIIALKEAIEKYQSAAEESHSNLRSVKDDLHHLRGLVLKELQ
EFGSSLCNMTTEVHSTVDDIRQTREMELKEQHQGELITVRQELEKQVHTLTEENQVNQNI
VRDVQRAMLELEGLMERKEKELTQLEHERERWVEKESCQNEKIKDFEQVISNQAEEVETL
TSTRDSLTNQLENLHFEIERSQQKIRQELEAVGQCHLRELEIRMKQEHEMEVETLIKDKQ
EALEHLAAENSSKLTEAENHHVAAIRGKDIQIQDFEARLTELAELRCKLEVEMALKESEM
EEVRVLFEEAKMQQAEAVRTQVDAETKVLGEELADLKKQLRIKNEEYEVDLAELRTLMRI
EKDHCISELVDRHEEETILLQSKLSALQKELQDAKTSYAEQQEKLQEELHQQVTSLSEEK
ENQFRSFQEQEQNLRTTINTLQSEKDQLLKNLDQERLVTQKDLGKEEASNIVPPDAFKEL
EQQKEELKKRLLDRIGQLESELHEKQSSKSDEGLSLRVEGHADAGPPKSLDSALQERLQQ
QRASLQIQLELMEKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRKV
TQQQDKDKALIETLSEDRASMMQEKKHLEEELNRLRSTTMVSSAFFTSNPSPQEVTETGA
AAAGAAGAAARALPVAETLADTDRLASVAALQDDEQVDSAVEASMVTVHDNMMSEEKQRI
MLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYV
LFTVGPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKF
YRVKAVPWNRKV
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgacctt
gctgtgcaaactgtactggagcttaaacatgccatccaagccaaatataagattgcaatt
cagcatcaagtccttgttgtcaatggaggagaatgtatggctgcagacagacgtgtctgc
agctacagtgctggcactgaaaccaaccccatatttctgttcaacaaagagatgattttg
tctgaccgggatccaacgattcccaaaaccactttttcaattgaaagtgagattcaggtc
aaagtggaggaatcacttctgatgccagctgtctttcacactgttgcctcgcgaacacaa
cttgctctggaaatgtttgaagttgccaacaaactttgctccttctgtgaacgtttggtt
cacgatgaacatctccaacatcaaggctgggcggctatcatggccaatctggacgactgc
actctgtcttatcagaagttgcttgtgaaattcaacgcagcatacacaaattatcaacag
gacttggaggaaattaaggttaaactttcaaagttaggaacagcagtcgctgtgatggca
aggatacctctgttggagtgtttgacaagacacagttacagagaaagcatagaaaagtcc
agttcaaccccagacaaggattcagaagagacggaaggagaaaaatccaccgactctgtg
ctctgcaatactcaagcacagatcccctctaagtcatcagcttccttgtctgcgtcaggg
aaagcctcatctgagcaagatggagaccaggaaacaaatgaaatgacggacagtggtggg
ctgagagctgcattattagatgacaacactccagaggccaccaacccatcctcattcaat
gttacactattagattggatcaacgtccaagacagaccccatgatgtagaatcggttgtg
aggaaatgcttcgactccatcaataggcttgatccaaggatcattcagcccttcctaaca
gattgccgtgacacaattgcaaagcttgataatcaaaacatgaaagccatcaaaggactt
gaagacaggttgtatgctctagaccaaatgattgcgagctgtaagaagttagtgaatgag
cagaaagagcttgctcagggatttctggccaatcagaagcgggctgaaaacctgaaggat
acatctgtcctgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgttggacattaaaaagaagtgcaccactgccaaacaagaactggca
aataaccttcaagtcagactcaaatggtgctgctatgtaatgcttcatgcggatcaagat
gcagagaagcttcaggctcttctcagacttctgacagagctgctagaaagagtgagggtt
gttgaggccctcagcaccgttccccagatgtactgcctagcagtggtggaagttgtcagg
agaaaaatgtttatgcgccattacagagagtgggccaatgcactcgtgaaggatgggaaa
cgactttatgaggcggagaagttcaaacgggaatcctttgggaaactctttagaaagtct
ttcctccgaaatcggttgtttcgaggacttgattcatggcctccaacatccttttgtaca
cgaaagcccagaaagtttgatgatgaactcccagacatctcagttgatgacctgcagtac
ttgaaatcttgttgtcctgttgaggtgcagcctttcctcctgcctggcggggggtctcgt
tggcctatacaatggattcccaccatgtgtgactttgagcccctaaatcgccatgtagag
acgcttcatcagctggtccaggctgcgcagagtgttgatgaaatgtctcagaccattaca
gacctactatctgaacaaagggcctgttgtagtcagagatcagcggcatcgacaccacgc
tctggaagcatgcctggaaccacaacaccgctgtcctccaggacacccctctccctgagc
ctccagggagccagctgccaggctctgcatgtacatgtccctgctcctttagaggatttg
tctccagacagcattgatgcacagacatttgactttgaaaccattggccatccaaacatg
gatccagtcctgcaacaggtatcccttgacttggattctctagcagagagccctgaatca
gacttcatgtcggcagtcaatgaatttgtgattgaagaaaacttgatctctcctaatccc
atcagtgacccaattagcccggaaatgatggttgagtcactgtactcctcagtcattaat
gctattgacagcaagcgaatgcaggataccacaatactagagaaagaaaattcaaggatc
attgcgctaaaagaagctattgagaagtaccagtccgctgcagaggagtctcattccaat
ttaaggagtgtaaaggatgatcttcatcacttaagaggtctagtattgaaagaactacag
gaatttggctcgtctttgtgtaatatgaccacagaagtgcacagtactgtggatgacatc
aggcagactcgtgaaatggaactaaaggagcagcatcaaggtgaacttataactgttcgc
caagagctcgagaaacaagttcacacactaacagaggaaaaccaagtaaaccagaatatt
gttagagatgtccagcgtgcaatgctagagttggaaggactcatggagcgcaaagagaaa
gaacttactcaacttgagcatgaaagagagcgatgggttgaaaaagagagttgtcagaat
gaaaagatcaaagactttgagcaagttatcagtaatcaagctgaagaggtcgagacgctc
acaagtacaagggactctttgacaaaccagcttgaaaacctgcactttgagattgaacgc
agtcagcagaaaatccgacaggagttggaagctgtcgggcagtgccacttaagggaattg
gagatcagaatgaagcaggaacacgagatggaagtggagaccctgattaaggataaacag
gaagctctggaacatcttgctgctgaaaacagttcaaagttaactgaggcagaaaatcat
catgtcgctgctatcagagggaaggacattcaaatccaggactttgaagctcggctaact
gagcttgcagaactccgctgcaaactggaggtggagatggctctcaaagagtcagagatg
gaagaggtaagggtcttgttcgaagaggccaagatgcagcaagcagaggctgtgagaacc
caagtagatgctgagaccaaagttcttggagaagagttggcagacctcaaaaaacaactt
cggataaagaatgaggagtatgaagtggacctagcagaattgagaactcttatgaggatt
gagaaggaccactgcatctcagagctcgtggacaggcacgaggaggagactattctgctg
cagagcaagctgtctgccctgcagaaagaactccaagatgctaaaacaagctatgctgag
cagcaggagaaacttcaagaggagttgcatcagcaagtgacttctctcagtgaagaaaaa
gaaaatcaattcaggagtttccaagaacaggaacagaatttgaggactactattaacact
ttacagtcagaaaaagaccagctcctgaaaaacctagatcaggaaagacttgtaactcag
aaagatttagggaaagaagaggcctcaaatattgtaccaccagatgcctttaaagagtta
gagcaacaaaaagaagagcttaagaagagacttttagacagaattggacaactagagagt
gagcttcatgagaaacaatcatcaaagagtgatgaagggttatcactgcgtgttgaaggt
catgcagatgctggaccacctaagtctttagattcagcattacaagagcgcttgcagcag
cagagggcctccctgcagattcagttggaacttatggagaagaagaagaatgaagagata
caaaaccttaagacatcactaattgcagagcaacagacaaatttcaacaccgttctaacc
cgagagaagctgaagaaggagcagatcatcaatgagctcacagaaaagttgcggaaagta
actcaacagcaggataaggacaaagctctgatcgagacgctgtctgaagaccgggctagt
atgatgcaggaaaaaaaacacttggaagaagagcttaatcgtctgcgcagtactacaatg
gtctcctctgccttctttacctcaaacccgtcaccacaagaggtcacagaaactggagcg
gcagcagcaggagctgctggagcagcagctcgcgctcttcctgttgccgagaccctggct
gacactgacagactcgcctcagtggcagcgctgcaagacgatgaacaagtcgactcagca
gtggaggccagcatggtgaccgtccatgacaatatgatgtcagaggagaaacaacggata
atgctacttgagaggactttacacatgaaggaagaagaaaacaagcgcctcagtcaacga
ctgatgtctcaaagcatgtcatctgtgtcgtcacggcattctgacaaaatcgccatcaga
gattttcaggtaggcgatttggttctcatcatactggatgaaaggcatgacaactatgtg
ctgttcacagtcgggcccaccctctattttctccactcggagtctctcactgcactggac
ctcaaaccagcatcagggacgtccagacggccatgggtacttggaaaagtaatggaaaag
gaatattgccaggcaaaaaaggcccagaacaggtttaaggttcctttgggaaccaagttc
tacagagtgaaagctgttccatggaacagaaaagtataa
DBGET
integrated database retrieval system
