Cololabis saira (Pacific saury): 133452826
Help
Entry
133452826 CDS
T09849
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133452826 (rhbdl3)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
133452826 (rhbdl3)
Peptidases and inhibitors [BR:
csai01002
]
Serine peptidases
Family S54: Rhomboid family
133452826 (rhbdl3)
BRITE hierarchy
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
AIF-1
EF-hand_11
EF-hand_5
EF-hand_8
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
133452826
NCBI-ProteinID:
XP_061588515
LinkDB
All DBs
Position
1:6290455..6470643
Genome browser
AA seq
406 aa
AA seq
DB search
MTAAGRDAHVSPAVAAHAEGEEIEVLESSEVLPAAPEDGQWKSLFDEYDPEDSGFISTER
FRDLLATHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGSRQL
KGCSLSEEPGLGLSQRFVRHVAYETLPREVDRKWYFDSYTYCPPPWFILAVTIAEVAVFM
YYGFQLDRLVLQVSSPSFLRSPLPYHPQLRAQAWRYVSYIFMHTGIEHLGLNMAMQLLVG
VPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNWSG
MKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVAVGLTLGVVVL
QNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNVFAYGLLDVRIPPAP
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagccggccgggacgcgcacgtctccccggcggtggccgcgcacgccgagggc
gaggagatcgaggtgctggagagcagcgaggtgctgccggcggccccggaggacgggcag
tggaagtctctctttgacgagtacgacccggaggattcaggcttcatcagcaccgagcgg
ttcagggacctgctggcgacccacggctctgagctcgacccccacaaactggaagtcctg
ctggctctggccgacggcaacgccgatggaaagatctgctaccaggacttcgtcaacctg
atgagcaacaagcggtccaacagtttccggagggccatcctgcagggcagccggcagctg
aagggctgcagcctcagcgaggagccgggcctggggctgtcgcagcgcttcgttcgccac
gtcgcctacgagacgctgccccgcgaggtcgaccgcaagtggtacttcgacagctacacc
tactgcccccctccctggttcatcctggctgtcactatagccgaggtggcggtcttcatg
tattatgggttccagctggaccggctggttctgcaggtgtccagcccgtccttcctacgg
agcccgttaccgtaccatccccagctccgggcccaggcctggcgctacgtcagctacatc
ttcatgcacactgggatcgagcatctgggcctgaacatggccatgcagctgctggtgggc
gtccctctggagatggtgcacggtgccttgaggatcggcctggtctacgtctgcggagtg
ctggcagggtctctggccgtgtccgtcacggatatgacggctcccgtggtcgggtcgtct
ggcggagtttacgccctggtgtccgcacatctggccaacgtcgtgatgaactggtcgggg
atgaagtgccagttcaagctgttccggatggccatggctctggtttgcatgagcgtggag
ttcggccgggccgtgtggctgcggttctaccccccggccttccccccctgccccaacccc
agcttcgtggcccacctggggggcgtggcggtggggctgacgctgggcgtggtggtgctg
cagaactacgagcagcggctgcaggagcagtccctgttctggatcttcttctgcgtctac
acgctgttcgtgctctgcgccgtcttctggaacgttttcgcctacggcctgctggacgtg
cggatcccgccggcgccgtga
DBGET
integrated database retrieval system
