Cololabis saira (Pacific saury): 133452858
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Entry
133452858 CDS
T09849
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133452858 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133452858 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
133452858 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
Pur_ac_phosph_N
V-set
C2-set_3
C2-set_2
ChitinaseA_N
Receptor_2B4
AceES-2
Motif
Other DBs
NCBI-GeneID:
133452858
NCBI-ProteinID:
XP_061588541
LinkDB
All DBs
Position
10:31536242..31556567
Genome browser
AA seq
1597 aa
AA seq
DB search
MSGSLHVTQKQHLHHQQEKLHHHEKLHHHHEKLEHHHEKLEHHHEKQQLQHEKLHHHHEK
LEHHHEKQQLQHEKLHHHHEKLEHHHEKQHHQHEKLHHQHEKLQHQHHYESRSHLSSKSS
FSQQAFSSHKATSHRQKTSVKTETGQEVLKLSPLPKRAKRTYLAMDKDKEVIGYVIPMFR
ANHETVRGLMENQEEHATEEGINYVAMRNLFVREAKESTEVKVEKKTRSMHIRESADRME
MTKTMEEWSEFRKKMNPDSLTHAPEYIVKPRGQTVWEGKTITLHCTVAGWPKPRIAWYKN
NVLIDAKAHSHKFRAESSYNMHSLEIKNCDFLDTAQYRVSALNIKGEVSSVATVVVKRFQ
DGEEAGPLDPKPHGFSPEHGVTFNTTMIEKFEVGFGTEGETLSLGCTVIIYPTVKKYQPD
VVWYRNSVPLKPSKWVHTHWTGERAFLTLTHLNKEDEGMYTLRVNTKSGFDTHSAYVYVR
DAEVEVEGVPVAPLDVHCHDANKDYVVVTWKQPAVEGSSSVLGYYIDRCEVGTHHWAQCN
DNPVKYARFPVTGLVEGRSYVFRVRALNKAGVSRPSRVSDAVIAMDPHDRARLRAGPSAP
WTGMIKFTEEDCTVGVVPGEPADVVVTEATKSYVVLAWKPPLQKGHEGVMYYIEKRVSGT
DDWQRVNTGMPVKSPRFALFDLAEGKSYSFRVRCCNSAGVSEASVSTEEIIVGDKLDVPA
VPGDPVAARNTDTSVAVFWAASKDVKHLAGYYIECSVVGTDVWMPCNNKPVKQTRFVCHG
LSTGLNYVFKVKAVNAAGYSLSSSISEAVVVKAAVATPRQPTGVTLHEAVKDYMVLGWNA
PADDGGADIRGYFVDYRSVKGDVYGKWHEMNLQALTTTSYKAENLKENVLYQFQVRAMNM
AGVSKASHASAAFECKEWTITVPGAPVHLHVLEVRDTTAVVLWDKPVFEGRSPVTGYYLD
IKESSAGEKGWKAGHEKLNKRKYMKVTGLKAGTSYVFRVRAENLVGVGKPSAHLGPILAQ
TRHGIKEIYVDVDDDGVISMVFECSEMNQDSKFVWSKNYKEITDSSRLTVVTEGGKSRAI
FNNPSMEDLGTFSCEVTNTDGFSSSYTLTEEGLLRLLDISYDHKFPVIPFKSEMAMELLE
KGRVRFWTQLEKFTADCHVEYVFNDVIVEQGKKYNMSFDKSTGIIEMFMDSLEVTDEGTF
TFNLVDGKAKGTTSLVLIGDEFRELQKKSEFERAEWIRKQGPHFVEYLDFAVTPECDVLL
KCKIGNIKEQTEIIWVKDRIEITEDDEDAKKIEKKDSELTFNIGKWVIKEEKTEKRKKSP
AEDARQPPRPKISKHDVGVYEISLKDERGQDKSSFNLTGAGYEAVMNELFRVIAHSSSEV
QVLSTEHGIVLHSTVTYYDENLNVGWLHKDSKIAASERVKAGVTGEQLWLKINEPTEKDK
GKYTMDIFDGKDGVKRAFELSGKAWEEAFEEFQRLKAAAHAERNRARVVGGLPDVVAIQE
GKSLNLTGNVWGDPVPEVTWTKNEKELVTNDHYKLKFEHGKFASITIAAVTTADSGKYAL
VVKNKYGTEAGEFTVSVYNPEEEESAEASKASKDKKH
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatccttacacgtgacacagaagcagcatctgcatcaccagcaagagaagctg
catcaccatgagaagctgcatcaccatcatgagaagctagagcaccatcatgagaagcta
gagcaccatcatgagaagcagcagctccagcatgagaagctgcatcaccatcatgagaag
ctagagcaccatcatgagaagcagcagctccagcatgagaagctgcatcaccatcatgag
aagctagagcaccatcatgagaagcagcatcaccagcatgagaagctgcatcaccagcat
gagaagctgcagcaccagcatcactatgagagccgctctcacctgagcagcaagtcatct
tttagccagcaggcgttctcctctcacaaggccaccagccatcgtcagaagacctctgtg
aagacagagacggggcaagaggtgcttaaactgagcccgctacccaagagagccaaacgc
acctacctggcaatggacaaggacaaagaagttattggctatgtcattcctatgtttaga
gccaatcatgaaacggttcggggtctgatggagaatcaggaggaacacgctacagaggag
gggatcaactatgtggccatgaggaacctgtttgtcagggaggccaaggagagtacggag
gtcaaagtggagaagaaaaccagaagtatgcatatcagggagtctgcggaccgcatggaa
atgaccaagacgatggaggaatggtcagagtttcgcaagaaaatgaacccagacagcctg
acgcacgctccggagtatatcgtcaagccccgtggacagactgtctgggagggcaagacg
atcacgctgcactgcacggtggccggatggcccaaacccaggattgcctggtacaaaaat
aatgtgctcatcgatgccaaggctcactcccataaattcagagctgaaagcagttacaac
atgcactccctggagatcaagaattgtgatttcctggacactgctcagtatcgcgtatcc
gcccttaatataaaaggggaagtttcttctgtggccactgttgttgttaaaaggttccag
gatggtgaggaagcaggtccacttgatcctaaaccacatggtttctcccctgagcatggt
gttacttttaacaccactatgattgagaaatttgaagtgggcttcggcactgagggggag
acattgagtctgggatgcaccgtcataatttacccaactgtgaaaaaataccagcctgac
gttgtgtggtacagaaactctgtacccttgaagccttctaaatgggtgcacacccactgg
actggggaacgtgcttttctcactctcacccaccttaacaaggaagatgagggcatgtac
acccttcgcgtcaacaccaaatctggctttgacacccactccgcctacgtgtatgtcaga
gatgctgaagtggaggtagaaggggttcctgtggcccccctggatgtgcactgtcatgat
gccaacaaggactatgtggtggtgacctggaagcagccagcggtggagggcagcagctcc
gtcctgggatattacatcgacaggtgtgaggtgggcacccatcactgggctcagtgtaac
gacaaccccgtcaagtacgcccgcttccctgtcacgggactggtagagggccgttcctac
gtcttcagggttcgagccttgaacaaggcaggtgtcagccggccgtctcgcgtctctgac
gccgtgatcgccatggatccacacgacagagctcgactcagagccgggccgtcagcacct
tggacagggatgattaagttcactgaggaggattgcactgtgggtgtcgtccccggagaa
cccgctgatgtcgtggtcacagaggcgaccaaaagctatgtggtgctcgcctggaagccc
cccttgcagaagggtcacgaaggagtcatgtactacattgagaagcgcgtttcagggacc
gacgactggcagcgggtgaacaccggcatgccagtcaagtctcctcgctttgcacttttt
gacctggctgaaggtaaatcctacagcttccgtgttcgttgctgcaactcggccggtgtg
agcgaggcctccgtctccacggaggagatcatcgttggggataaacttgacgtgccggcg
gttcctggcgatcctgtggctgccaggaacacagacacctctgtggcggtcttctgggcg
gcctctaaggatgtgaagcacttggctggctactacattgaatgcagcgtggtgggaact
gacgtctggatgccttgcaacaacaaacctgtcaagcaaaccaggtttgtttgccatggc
ctctctacggggctgaactacgtgttcaaggtaaaggcagtgaatgctgctggatacagc
ctgagctcctccatctccgaggctgtggtcgtcaaggccgccgtcgcaacacccaggcag
cccaccggcgtcaccctgcacgaggctgtcaaggactacatggtgctgggctggaacgca
cctgctgatgacggaggagccgatatcagaggatactttgtggactacagatctgtgaag
ggagacgtgtatgggaaatggcatgaaatgaacctccaggctttgaccacaacctcatat
aaagctgaaaacctgaaggaaaacgtcttgtaccagttccaagtgcgtgcaatgaacatg
gcaggtgtgagtaaagcctctcatgccagtgcagcgtttgaatgcaaggagtggaccatc
actgttccaggtgctcctgtccatctgcacgtgctggaggttcgtgacaccactgctgtg
gtcctgtgggacaaacctgtgtttgagggtcgcagtcctgtcactggttactatttggat
atcaaggagtcctcggccggggagaaaggctggaaggctggtcacgagaaactcaacaag
aggaagtacatgaaggtgactgggctgaaggctggaacatcctacgtcttccgtgtgcgt
gccgaaaatcttgttggagttggaaagccctcagcacacttaggtccaatcctggcccag
actcgccatggcatcaaagagatttatgtggatgtggatgatgatggtgtgatttctatg
gtcttcgagtgctctgagatgaaccaggactctaaatttgtttggtccaagaattacaag
gaaatcacagactcgtcccgtctgactgttgtcaccgaagggggcaaatctagggctatc
ttcaacaacccctccatggaggatctgggcacgttctcctgtgaggtcaccaacactgac
ggcttctcctccagctacacactcactgaggagggtcttctgcgtcttctggacattagc
tacgaccataagttccctgttattccctttaagagtgaaatggccatggagctacttgag
aagggccgtgtgcgattctggactcagctggagaaattcaccgctgactgccatgtggag
tacgtcttcaatgatgtcattgttgagcaaggaaagaaatacaatatgagtttcgacaag
tccaccggcatcattgaaatgtttatggactccctggaagtcacggacgagggaacgttc
acgtttaacctggtggacggcaaagcaaagggcacaaccagtctggtgctgatcggagat
gaattcagggagcttcaaaagaaatcagagtttgagagagcagaatggatcagaaaacaa
ggtccccactttgttgagtacctcgattttgctgtcactccagagtgtgatgtgctgctg
aaatgcaagattggaaatattaaagaacagactgagatcatttgggtaaaggatcgcatt
gaaattacagaggatgatgaggacgcgaagaaaatcgagaaaaaggacagcgagctgacc
tttaatattggaaagtgggttattaaggaagagaaaacagagaaaaggaaaaaatcacca
gcagaggacgctcgccaaccaccaagacctaaaatctccaagcacgatgtaggtgtttac
gaaatctccttgaaggacgagaggggccaagataagagctccttcaacctgacgggtgca
ggatacgaggctgtaatgaatgagctgttcagggttattgcccactcttccagtgaagta
caagttctcagcactgaacacggcatcgttctccactctacggtcacatattacgatgag
aacctgaatgttgggtggcttcacaaagattcaaagattgcagcttcagagagagttaag
gctggagtcacaggagagcagctgtggcttaagatcaatgaacccaccgagaaggacaag
ggcaaatacaccatggatatctttgatggcaaggacggcgttaagagagcctttgagctg
agtggcaaggcatgggaggaagcatttgaagaattccaaaggctcaaagctgcagcacat
gcagaaagaaaccgcgctcgtgtcgttggaggcttgccagatgtggttgcaatccaagag
ggcaagtctctgaacttgactggcaatgtgtggggcgatcccgtacctgaggtaacctgg
acgaagaatgaaaaggagctggtcaccaacgaccactacaaactcaaatttgagcatggc
aagtttgccagcatcacgatcgctgctgtcaccacagctgactctggcaaatacgccctc
gtggtcaagaacaagtacggcacagaagctggcgagttcaccgtcagtgtgtacaaccca
gaggaggaagagagcgcagaggcgagcaaggcgagcaaggataagaaacactag
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integrated database retrieval system
