Cololabis saira (Pacific saury): 133452895
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Entry
133452895 CDS
T09849
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133452895 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133452895 (rpap2)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133452895 (rpap2)
Protein phosphatases and associated proteins [BR:
csai01009
]
HAD phosphatases
Fcp/Scp phosphatases
133452895 (rpap2)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133452895 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
MOFRL
Motif
Other DBs
NCBI-GeneID:
133452895
NCBI-ProteinID:
XP_061588604
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All DBs
Position
10:33017501..33035816
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AA seq
652 aa
AA seq
DB search
MAAEQSRRSVSSAKMSKKGGRRGKLTAEEEAKRREQVKEQLMQQLELERRALKVVERLLE
DSVAEDFLVDCAKFITTANYKDTVEERSILKCCGYPICSNKLGKIPTQQFRICTKTNRVF
DITERKMFCSNFCYKSSKEFELQISQTPLWLRTHESPPGIKLLKKGDGGRSGEEVMLSAR
RLAEGEIENPLASSSEGLNNDGQSSAGAGHSDGSDGEQDFVSSVVSQQQKPRVHWGDLPK
RTDEDGEGKHEEVKMRQNLLMKGNGDETELHRSQTKEKKEIRKEKVSKEPFVGKELHRLN
TDEAAQGERDSPEDISVEEVTAKINTCLSEIFTQSPDQPEPTSPLTSPAVETKPSLESEH
PPPSTLTVASQDQHRKPSSDPPGLNITQVGMSRTGAAGLRDLLKNLAAPDAMRLNLLEGL
KATLKEWRTDETVTFLYGIDPPAASAAADVKEETEELDEDDLEDDVTSTGAEEQQTPSAA
APDYETLQKATQQMELKVREFYKGTWVLPDQEGPLNGNEATAQDKSTKDPVLPLVDSQAQ
QLIQKKITVEKLSGCLRNIVGPLCLTMSDVSTHLNNLVRTFRFTNKNIIHKSPEWTLIAV
VLLHLLAEVSPVVREALKMADSVEYLNTLMGELGLQEQDLLNVVQLFKVPKH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcagagccggaggagcgtgagctcggccaaaatgtctaaaaaaggtggg
aggcgtggcaagctcaccgctgaggaagaagctaaaaggagggaacaggtgaaggagcag
ctgatgcagcaactagagctggagagaagagctcttaaagtggtggagcgcctcctagag
gacagcgtggccgaggacttcctggtcgactgtgccaagttcatcactactgctaactac
aaagataccgttgaggagagatccattttaaaatgttgtggttatccaatatgttcaaat
aaacttggcaagatcccaactcaacaatttagaatatgtacgaagactaacagggtgttt
gacatcacagagcgtaagatgttttgcagtaacttttgctacaaatcctccaaagagttt
gagttacaaatatcacagacgcctctttggctccggacgcacgaaagtcctccagggatt
aagttactgaagaaaggagatggggggcgctctggagaggaggtgatgctgtctgcaaga
cgcctggcagagggggagatcgagaacccgctggcttcatcatccgaaggactcaacaac
gatggacaaagctcggcgggagctggccacagcgatggcagcgacggagagcaggacttt
gtctccagcgtggtctcccagcagcaaaaacccagggtgcactggggggacctgccgaaa
cgcacagatgaagacggcgaagggaaacacgaggaggttaagatgagacagaatctgctg
atgaaaggaaacggagatgagactgaacttcaccgaagtcaaaccaaagagaaaaaagaa
ataagaaaagagaaagtaagcaaagagccttttgttggaaaagagctgcacagactaaac
actgacgaagcagcacaaggagagagggactcacctgaggacataagtgtggaagaagtc
acagcaaagataaacacgtgtttatctgaaatcttcactcaaagtcctgaccagccagaa
ccaacatccccacttacgtctcctgccgtagaaacaaaaccctcactagaaagcgagcat
ccccctccttcgacgttgactgttgccagtcaggaccagcacagaaaaccctcgtcagac
ccgcccggcctcaacatcacacaggtgggaatgagcaggacaggagcggcagggctgcga
gatctgctgaagaaccttgctgcacctgatgccatgcggctgaatcttctggagggtttg
aaagcaactttaaaagagtggcgcaccgatgagactgtgacgtttctttacggcatcgat
cctccggcggcttccgctgccgctgatgtgaaggaagaaacggaggagttggacgaggat
gacctcgaggatgatgtgacgtcgaccggcgctgaggagcagcaaacgccgtcggctgca
gctccagactatgagacgctgcagaaggcgacccagcagatggagctcaaagtcagagag
ttttacaaggggacctgggtcctgcctgaccaggaagggccgctgaatggaaatgaggca
accgcccaggacaagagcacaaaggatccagttttgccgctcgtcgactctcaagctcag
cagctcatacagaagaaaatcacagtggagaagctcagcggctgcctcaggaacattgta
ggcccactgtgcctcaccatgagtgacgtctccacccacttaaacaacctggtcaggacg
ttcaggttcaccaacaaaaacatcattcacaaatctccagagtggaccctcatcgctgtg
gtgcttctgcatctgctggcagaagtgtctccagtggtgcgagaagccttgaagatggca
gattcagtggagtatttgaatacgctgatgggggagctgggcctgcaagagcaggacctt
ctgaacgtagttcaactgtttaaagtcccaaaacactga
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