Cololabis saira (Pacific saury): 133452913
Help
Entry
133452913 CDS
T09849
Symbol
poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
csai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133452913 (poll)
03450 Non-homologous end-joining
133452913 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133452913 (poll)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133452913 (poll)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133452913 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
133452913 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
MCPVI
NTP_transf_2
PTCB-BRCT
Ribosomal_S21
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
133452913
NCBI-ProteinID:
XP_061588641
LinkDB
All DBs
Position
1:38837153..38843917
Genome browser
AA seq
569 aa
AA seq
DB search
MEQHHGITKAFPKVKRAKVLQGRDAPSQKKSKADDCDVTGNTFKGVTAYLLSTGIGNARC
QIFQRQIQQWGGQLESSLCPSVTHVVVDDGMDSDRALRLLKVDCMPSGVHLVKCTWLSMC
ISEKKLLDVDDYSLLLTKRSSEARHSKTKKESANITPTAEATIEPVTNHAKQEKNINMSI
PESKEQVRGDEDGVSQKDLEALITGLQPKEETQTTSLNPVPDATAGQTPVSGKWVCAQSS
QCKTNNFNKHITDKLEMLAKAYTHQGDKWRALGYAKAVNALKSYHKPVGSYQEASQIPGI
GKRMADKIEEIMESGHLRKLDHIGEAVPVLELFTNIWGAGAKTAQLWYQQGFRTLEDICT
KAHLSNTQKIGLKHYDDFLDRMPREEAAAIEKVVRDAALSLDPGFVAMACGSYRRGKATC
GDVDVLISHPDGKSHKGIFTKVLQILHDTGFLTDDLVSHEENGEQKKYMGVCHLPGPGQR
HRRLDIIVVPYDEFASALMYFTGSAHFNRSMRALAKTKNMSLSEHSLNKDVVRQGSLKVH
AGTPLLTPTEKDVFTLLGIPYREPHERDW
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacatcatgggatcacgaaagccttccccaaagttaaaagagccaaagtgcta
caaggaagggatgctccctcacaaaagaaatcaaaagcagacgattgtgatgttacagga
aatacttttaaaggagtgacggcataccttctgtctactggaattggaaatgcaagatgc
cagatcttccaaagacagatccagcagtggggtgggcaattggagagttccctgtgcccc
agtgtcacccatgtggtcgtggatgacggcatggacagcgacagggctctgcgcttgctg
aaagtggattgtatgccctctggtgtccatctagtgaaatgcacttggttgagcatgtgc
atcagtgagaagaaactactggatgtagacgactacagccttcttttgaccaagaggagc
tcagaagcaaggcattcaaaaacaaaaaaggaatcggcaaatatcacacccactgcagaa
gctaccatagaaccagtgactaatcatgccaagcaagaaaaaaacataaacatgtcaatc
ccagagagcaaagaacaagtgcgtggagatgaagacggcgtctctcagaaagacctggaa
gctcttattactggcctgcaacccaaagaagagactcagaccacaagcctaaatcctgtt
cctgacgccactgctggtcaaacaccggtctcagggaagtgggtctgtgctcagtcttct
cagtgcaaaactaataacttcaacaaacacatcactgacaagcttgaaatgctggcaaag
gcctacacacatcagggggacaagtggagggcactgggctacgccaaagctgtaaatgca
ctgaagagctaccacaaacctgttggatcatatcaggaagcttcccagatccctggaata
ggaaagcgcatggccgacaaaattgaagagatcatggagagtggtcacttgcggaagctt
gatcacatcggagaggctgtgccagttttggagctttttaccaacatctggggcgcagga
gcgaaaactgcacaactttggtaccaacagggatttcggactttggaagacatttgcaca
aaagcccacctgagcaacactcagaaaataggactgaagcactacgatgactttcttgac
cgaatgcccagagaagaagcagcagcgatcgagaaagtggtgagggatgctgccctatcc
ttagatccaggctttgtggccatggcatgtggctcctaccgtcggggaaaggctacatgc
ggagatgttgacgtgcttatatctcaccctgatggcaagtcccacaaaggcattttcacc
aaagtgttacagatcctccacgacactggctttttgacagatgacctggtgagccacgag
gagaatggagagcaaaagaaatacatgggtgtgtgccatttgccgggacccggccagcgc
catcgcaggcttgacatcatcgtagtaccttacgatgagttcgctagcgcactgatgtat
ttcaccggatcagcacacttcaaccgctcaatgagagccctggcaaagacaaagaatatg
agcttatcagagcactccctgaacaaagatgttgtgcgccaaggtagcttaaaagtacat
gctggcactccacttcttacaccgacagagaaggatgtttttacgctgttaggtataccg
tacagagagccccatgagagggactggtga
DBGET
integrated database retrieval system