Cololabis saira (Pacific saury): 133452927
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Entry
133452927 CDS
T09849
Symbol
depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
133452927 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133452927 (depdc5)
Membrane trafficking [BR:
csai04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
133452927 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
133452927
NCBI-ProteinID:
XP_061588664
LinkDB
All DBs
Position
10:34146707..34184279
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AA seq
1612 aa
AA seq
DB search
MKTNKSYKLVLHKKGFAGSDDELVVNPKVFPQVNLGDIVEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVVVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQTSELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYTAKTLEEFPEILRA
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLKEAGSFPAGYNST
AVQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNKTTPGDSRVGDDYNLPHWINHSFYTSKSQSSCTFFT
PRIKLAGRKIHAERFKNSKDHAPCAPKDSDNSLPIQVDYDAYDAPVFRLPGPSRIHRNTN
IRYWTACNILPAQCDGSSSRLNSSLFLRMGRDRETSGRKSWGSMDVSTGTNASPPVRSGA
PDEQRSLTSDDSLGPVSNMLLIPRLPPAQYEVSSSLGYTSTRDLLEKMMDSQRDSSAPGR
FTVGSAESTLHIRPGGYSTQRALINPFTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHH
QTRQNMAELQGSQQRDPAQTSAELLELAYQEATGRQTISRHTGENGGYVCGGMEEFTGSP
GSNNSGPLSNRCASSQDYSSNGTDPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTD
YFPDHRTLQNDYTEGCYDLLPHSDLERRDDDAPVMSASQVFEEFICQRLMQGYQIIVQPN
NRKPQPAVATPLGSSPLYARGLVSMRRVEKEEAIYWLSMGRTFHKVCLKDKIITVTRYLP
KYPYESAQIQYSYSLCPPHSEAQFVSCWVEFGHERLEEYKWNYLDQYICSGGSEDFSLID
SLKFWRTRFLLLPAGGARRVADGEGHWDVYGDGAGTGMVGNGDWILLDGFIRFMEGLNRI
RRRHRSDRIIRQKGTPLKGLQVTSPLPSYPAEPVVPPPGKRGTSVLSALLEMEQNQNRTV
EEQQPKPSVAVSDLSSVATAPTYIDSPRKDATFILDFVRSPRSSYIYHSQLPAETSEAAD
KGMQPGLMGAAAVQPAGESAAGSLDTSGQSAAGAVCLSSSSTLSEIVEAIKHPTRGVQLL
PEQKGLPLNCFISTEVVHWLVNNVEGVSTQGMAVDIMQKILDEGLVAHASGDALRTFVYG
FYFYRIVGEKDGLSSQLQTTAAGGWSTAALEDFALFQRKWFEVAFELEELRPCDLPAFLL
PWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCY
YHGNFSLKAAFEIKLQWMAVTAAVLFEMVQGWHRKAASCGFLLVPALEVPFALTSYLYGD
PLRAHLFIPLSIQCLLKNASDNLFEGFEPETYWDRMQLFQEAILYRFGFVHDKFSASTFN
FPAENKLQYIHVTGTVFLQLPYSKRKYSSGQQRRRRNSTTSNNLAPFSGEDRVGYYWAYN
TMLTKAWRTGVLGDERLADRLLKDFTDFCCNKDNRLLNFWDSCQEKMSASAP
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaataagtcgtacaaacttgtgttgcacaagaaaggctttgctggaagcgat
gacgagctggttgtcaacccaaaggttttccctcaagtaaatttaggagacatagtggag
atcgcacaccccacagatgagtacagtcctctcctgctgcaggtgaagagcctcaaagaa
gaccttcagaaagagacgattagtgtggaccagactgtagcacaagccttcaaactgcga
gcgtaccaggatgttgttgtcaacattgtggacccaaaggacgtgacgctggacctggtg
gagctcacgttcaaggaccagtacattgggaggggggacatgtggaggctcaagaagagt
ctggtgagcacctgtgcctatgtgacccagaaggtggagtttgcaggaatcagagctcag
accagtgaactttgggtgaagggagagaaagttacgtgtggctacatcagtgaggacacc
agggtggtgttcaggtccacgtctgccatggtgtacatcttcatccagatgagctgtgag
atgtgggactttgatatctacggcgatctctactttgagaaggctgtaaatggtttcctg
tccgatcttttcgccaagtggaaggagaagaactgcagccacgaggtgacggttgtcctt
ttctctcgcacgttctacactgcaaaaactctggaggagtttccagagatcctgcgagcg
tccatcagacaggaccacgagggacgcttttacgaagacttctacagggtcgtggctcag
aacgagagacgggacgagtggacgtcattacttatcaccatcaagaagcttttcatccag
taccctgtgctggtgcggctgaaggaagcaggcagttttcctgcaggctacaactccacc
gctgtccaaggaaactacctggaggccatcaacctttccttcaatgtgtttgacaagcac
tacatcaaccgtaactttgaccgcaccggccagatgtcggtggtgatcacgcccggcgtc
ggtgtgtttgaggtcgaccggctgctcatgatcctcaccaaacagcgcatgatcgataac
ggcatcggtgtggacctggtgtgcatgggagagcagccgctgcacgcagtaccgttgttt
aagctgcacaacaagacgacgcctggagactcgcgtgtgggggacgactacaacctccct
cactggataaaccacagcttctacacctccaaaagtcagagttcttgtaccttcttcacc
ccccgaatcaaactggccggtcgtaagattcatgctgaaagattcaagaacagcaaagac
cacgctccttgtgcaccgaaggactcggacaacagtctgcctatacaggtggactacgac
gcctacgacgcgccggtcttccggctgcccggtccttcacgtattcacaggaataccaac
atcaggtactggaccgcttgtaacatcctcccagctcagtgtgatggatcctcgtcccgg
ctgaacagctccctgtttctcaggatgggccgagaccgggagacgagtgggaggaagagc
tggggctccatggacgtgagcacggggacgaacgcctccccccctgttcgttcaggggct
ccggacgagcagaggagcctgacctccgacgacagcctgggccccgtgtccaacatgctg
ctgattccccgccttcctccggctcagtacgaagtcagcagttctctgggatacacgagc
acgagagatttattagagaagatgatggactctcagcgggactccagcgccccgggcagg
ttcacggtggggagtgccgagtccacgctgcacatccgtccgggaggatacagcacccag
agagccctcatcaaccccttcaccccctccaggatgcccatgaagctcacctccaaccgc
cggcgctggatgcacaccttccccgttggtccttctggggaggcgatccagatccaccat
cagaccaggcagaacatggcagagctgcaggggagccagcagagggatcccgcccagacc
tccgccgagctgctggagctggcgtaccaggaagccactgggaggcaaacaatctcaaga
cacacaggcgagaacggaggttacgtatgtggagggatggaggagttcactgggagtcca
gggagcaacaacagtggaccgctgagcaaccgctgcgcctcctcccaagactattcctcc
aacggtacagatccaaccctgctgctgtctgcacccccgacagtgcccagcttctgctgc
acagtgggggtggactggaagtccctgaccaccccggcctgcctccccctcaccaccgac
tacttccccgaccaccggacgctgcagaacgactacacggagggctgctacgacctgctg
cctcacagcgacctggagaggcgggacgacgacgctccggtgatgagtgcgtctcaggtg
tttgaggagttcatctgtcagaggctgatgcagggttatcagatcatcgtccagcccaac
aacaggaaaccgcagcctgccgtggccacgcccctgggcagcagtcctctctacgccaga
ggtctggtgtccatgcgccgcgtggagaaagaggaggcgatctactggctcagcatgggc
cggaccttccacaaggtctgcctcaaggacaagatcataactgttacccgctacctgcca
aagtacccgtatgagtcggcccagatccagtacagctacagcctgtgtcctccgcactcc
gaagcccagttcgtctcctgctgggtggagtttggacacgagaggctggaggaatacaag
tggaactacctggaccagtacatctgctcggggggctccgaggacttcagcctgatcgac
tccctgaagttctggaggacccgcttcctcctgttgccggccgggggggcgcggcgggtc
gcggacggggaggggcactgggacgtctacggcgacggagcgggaacggggatggtgggg
aacggggactggatcctgctggacggcttcatccgcttcatggaggggctgaaccgcatc
cggcgacgccatcggtccgacaggatcatcaggcagaaaggaacgccgctgaaaggactg
caggtcactagtcctctaccctcgtaccccgcggagcccgtggtgcctccaccaggaaag
agagggacgtccgttttatcagcgctgctggagatggagcagaaccaaaacaggacggtg
gaggagcagcagccgaagccctcggtggcagtgagtgacctctcaagcgttgccacggct
cccacgtatatagacagtccccgcaaggatgctacctttattttggattttgttcgtagc
cctcgctcctcctacatctatcactctcagcttcctgcagaaacctctgaagctgcagat
aaggggatgcagcccggactgatgggagctgcagccgtgcagcctgcaggggagtctgca
gctggcagtctggacaccagcgggcagtctgcagcaggggccgtctgtctgtcctcctcc
tccactctctcggagattgtcgaggccatcaaacaccccacgaggggagtgcagctgctg
ccggagcagaagggcctgccgctcaactgcttcatcagtaccgaggtggttcactggctg
gtcaacaacgtggagggcgtgagcacacaggggatggctgtggacatcatgcagaaaatt
cttgacgagggtttggtggctcacgcttcaggagatgctctgcgtacattcgtctacggc
ttctacttctacaggatagttggagaaaaggacggcctgtcctcccagctgcagacgacg
gccgccggaggctggtcgactgcggcgctcgaggacttcgccctcttccagaggaagtgg
tttgaagtggcttttgagctggaggagctgcgaccctgtgacctgcccgccttcctgctg
ccctggctgcccagccggccagcctcctacgcaagtaggcacagctccttcagccgcagc
tttggagggcgcagccaggccgccgcactgctagctgctacggtcccggagcagaagacg
gtcactctggacgtggacgtcaataaccgcagcgaccggactgaatggtgcagctgttat
taccacggcaacttttctctgaaagctgcctttgagatcaagctacagtggatggcggtc
accgctgcagtgctctttgagatggtccagggctggcacaggaaggcggcctcctgcggg
ttcctgttggttccagcgctggaggttccttttgctctgacgtcgtacctgtacggagac
ccgctgcgagcccacctcttcatccctctcagcatccagtgtctgctgaagaacgccagc
gacaacctctttgaaggttttgaaccggagacctactgggacaggatgcagctctttcaa
gaggccatactctacaggtttggcttcgtgcatgacaagttttctgcctcgacctttaat
ttcccggcagagaacaagcttcagtacatccacgttacaggcaccgtgttcctgcagctg
ccctactccaagaggaagtactccagcgggcagcagcgccggcggagaaactccaccacc
tccaacaacctggcccccttcagcggcgaggaccgggtgggctactactgggcgtacaac
accatgctgaccaaagcctggagaacgggggtgctgggggacgagaggctggccgaccgc
ctgctcaaggacttcacagacttctgctgcaacaaggacaacagacttctgaacttctgg
gacagctgtcaggagaaaatgagcgccagcgccccctga
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integrated database retrieval system
