Cololabis saira (Pacific saury): 133452984
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Entry
133452984 CDS
T09849
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133452984 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
133452984 (acin1a)
03015 mRNA surveillance pathway
133452984 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133452984 (acin1a)
03041 Spliceosome [BR:
csai03041
]
133452984 (acin1a)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133452984 (acin1a)
Spliceosome [BR:
csai03041
]
Complex C
Other components
EJC/TREX
133452984 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
HeH
Motif
Other DBs
NCBI-GeneID:
133452984
NCBI-ProteinID:
XP_061588758
LinkDB
All DBs
Position
10:complement(35221799..35243826)
Genome browser
AA seq
1730 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
VGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNEQEDHTDVNNSTSCP
PPAQDATPALAGQHKPAGPSNAEGLSDSVNAGEVNKNQEADVSSPPASGSMGVRAPGGGK
WQDVGSASSKAAADSNDEDSEDGDEDGDDDDWDNNARRKNFREPAKVPAARERSMASRQP
QQQNIPSLFSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPLRHSPSSSSSGSSSS
GSRSSSPEPERSVERKPGPLTLLARKMESEGAFSGAGWHGTEGEGGSSPSTTSLPGRGPP
EGLVSAISHTANTAGHAPFPMIPGTHQGIIGAPLAHGEGPVSVLKSAALEERDRERELEK
KREKALELERQAESKRLEQERAAEEERERAMALEREEKEKALERERFERQQALEREEREK
ALQRERELALEKEKQEREEALAKEKEERLRAIELLRQKELERQRALEQERLQREREEKER
QEREERERQMELEKARALEREREAIERAREQERLERERALEAERKEKERALEAERKEKER
IEKEKALEQERLEKERIEKEKAMEQERIKREKAAEQERIKREKAAELERIEREKAIELER
IKKEKALEQERLALEKREKERIEKERIEKEKALEQERIERERRERERREREEKEKAEREA
ALEKERIEKERAEKARKEQLEREKALEKEKLERARALEKERQEKERALEQERIKALEQEK
LDKEKAMQKEKEEQERALEQEREKFRMAEKERESHLPPSKRGREVGLTSLPTPPLLSTGP
TGSSSTEVPQREDDHASASKAEGPAAESSASVSPAAPPSHSSFKKFHLLRDSPVQPQSSS
TSLIIKRPRTFSDSPQPRASPLTSPTRLVIPQLEVHKAPNEQEDPQKQAHQETVSVSVCS
ATARSEQKNSDKTAPAQSPAEGAKRLVTEVKEKAASSKTEDSVKESSERAKKVDDGKSSS
SPSDAAEEGRSDTKKEEKRPRRRSSSNDSSSSESDSGSSSSQSSGSSTSSQDKTRPVSRG
REEGKRERDSSQRHMDTTKAEGLRESPEASPCKKKASIESSKTSDGDGHIEQKLFSDAST
REVPHRRTKDSERGEEKDKQRQVKETAMADSEKVSETNEETPKAFSARKISLSNSKSSPG
TVSAEGEQESGTVAARKRRWGSSTAVTAKKPSISITTDSLKSLIPDIRPCLGQEAVVDLH
PEEAAISGTEDEDTERSDQDLQIRRTVTQVVHAESQENGQKEAKRSKREEMEEENSQLDQ
ERIKTHEKQMDISLPEPVETQSPPHSSPDVETNTVTPSDTLIRRSISQQKSGVSITIDDP
VRTAQQPSPPRGKVSNIVHVCNLVRPFTLGQLKELLGRTGSLVEEGFWIDKIKSHCYVTY
SSTEEAVATRTALHGVKWPQSNPKVLSVDFCQQDELDFHKGLGAAVGPGGEEQGPAPGRG
RTLGLPSLLPERDQWAEREREMERRERARAEREWDRDKVREFGKPEEEKEGAPRRSRSRE
KRRKERGKSKEKKMEKKAEDPPAKLLDDLFRKTKAAPCIYWLPLTEEQYLQREVARAERM
KEREKRRKELEEEEEKKREEERKERMKATSAAATGDRSEGEKDKERDRERDRDRGRDRDR
ERERDRERARERDRDRENDKRRDGYRRPGGSGTGTGRRSRSRSEPRERRR
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctgcagtccctgcgagtggcg
gacctgaaggcggccctggaggagagaggactgtcgaaaagcgggcagaagaatgctctc
atcaaaagactgaagggggctctcatgctggagaatttgcagaggacctccactgctcat
gttggactgcagccaaactctcagattggtgaggaaatgagccaaaacagttttatcaag
cagtatttggctaagcaacaggagctcctgaggcaacggctggagagagaggctcgtgaa
gcatatgaaacaaatgagcaagaggaccacacagatgttaataacagtacatcatgcccg
ccccctgctcaggatgctaccccagctttagctgggcaacacaagccagccggtccctct
aacgcagaggggttgtcggactcagtgaatgcaggagaagttaataaaaatcaggaggct
gacgtgtccagtccacctgcctctggctctatgggcgtgcgggctcctggtggtgggaaa
tggcaagacgtaggttctgcatccagcaaggctgcagctgacagcaatgatgaagacagt
gaggatggagacgaggatggtgacgacgatgactgggacaacaatgcccgaaggaaaaac
ttcagagagccagcaaaggtgcccgccgcaagagagaggtctatggcatcccgtcaaccc
cagcagcaaaatatcccttctctgttttctcctcaactccgccagccaacacctcctccc
tccccacctccagagttatcgttccctttacctgacacccctaaacagagcccgcctagt
cctgatgtcgcccccctcaggcactcacccagtagctccagctctggttcttccagtagc
ggtagccgtagtagcagcccagagccagagagaagtgttgagcgcaagcctggacccctg
acccttctcgcacgtaaaatggagtcggaaggggctttctctggagcgggctggcatggc
acagaaggggaaggaggcagttcaccttctactacatcacttcctggcagagggcctcca
gaaggtctggtgtctgcaatcagtcacacagccaacactgcaggacatgcaccatttccc
atgattccaggcacccaccaaggtatcataggagcacctttggcccacggcgaaggacct
gtgagtgtgctcaagtctgctgcgctagaggagagggacagagagagggagcttgagaag
aagagagaaaaagcattagaactggaaaggcaagcagagtcgaaaaggctcgagcaagaa
cgagcagcagaggaagagcgagagagagctatggcactagagcgagaggaaaaggagaaa
gctctggaaagagagcgatttgagcgacagcaggccctagaaagagaagaaagagaaaag
gctttacagcgggagcgagaacttgctctggaaaaagagaagcaggagcgagaagaagct
ttggctaaagagaaggaggagcgattgagagccatagagctattaaggcaaaaggagctg
gaaagacagagggctttggagcaagaacgtctgcagagagaaagggaggagaaggagagg
caagaaagggaggaaagagagcggcagatggagctagaaaaagccagggctctggagaga
gaacgggaagctattgaaagagcacgtgagcaggagaggttggagagagaaagagctctg
gaagctgagagaaaggagaaggaaagagctctggaagctgagagaaaggagaaggaaaga
attgaaaaagaaaaagcccttgaacaggagaggctggagaaggaacggattgagaaggag
aaagctatggagcaagagagaataaagcgcgagaaggctgcagagcaagagagaataaag
cgcgagaaggctgcagagcttgaaagaattgagagagaaaaggccatagagctggaaaga
ataaaaaaagaaaaggctctagagcaagaaaggttggctctggagaagagggaaaaagag
agaattgaaaaagagagaattgaaaaagagaaggcattggagcaagagagaatagagagg
gaaagacgagagagggaaagacgagagagggaagaaaaagagaaggcagagagggaggca
gctctagaaaaagagaggattgagaaggaacgagctgagaaggcgaggaaggaacagctg
gagagagagaaggctctagagaaggagaaacttgaaagggcaagagccctggagaaggaa
aggcaggaaaaggagagagctttggagcaagaaaggataaaggctcttgaacaggaaaaa
ctggacaaagagaaagccatgcagaaagaaaaagaggaacaggagagggcactggaacag
gagagggagaagtttaggatggctgaaaaggagagagagagtcacctccctccatccaaa
cgtggccgtgaggttggtctcacttccctgcccactccccccctcctctccacaggaccc
actgggagctcatcgacagaggtgccacagcgggaggatgaccatgcatcagcgtccaag
gctgaaggccccgctgcagagtctagtgcatctgtgtcaccagcagctccgccatctcat
tcgtcatttaagaagttccacttattacgcgattccccagttcaaccgcaatcttcatcc
acttctttgattatcaagcggccccgtacattctccgatagccctcaacctcgggcctca
ccgctcacctcacccaccagattagtgataccacaactagaagtacacaaggcccccaac
gagcaggaggatccacagaagcaggcacaccaggagaccgtctctgtgtccgtctgttct
gcgacggcccgatcggagcagaagaattcagataaaactgcaccggcccagagtcctgca
gaaggggccaaaaggctcgtcacggaggtcaaagaaaaagcagcttcatcaaagactgaa
gactccgtcaaggagtccagtgaaagagcaaaaaaagtggatgacggcaagagttcctca
agcccatcggatgctgcagaagaggggagaagtgacacaaagaaggaggagaaacggcca
agacgacgatcatcatctaatgattcctcttcctcagaatcagactctgggtcctcctca
tctcaatcatctggctcatccacatcttctcaagataaaacccgccccgtttccagaggt
agagaggagggaaagcgtgaaagagactcctcacaacgtcacatggacacaacaaaggct
gagggtttaagagagagcccagaagcctccccctgcaaaaagaaagcctctatagagagc
agtaaaacttctgatggagatggtcacattgagcagaaactgttcagtgatgcatcaacc
agagaggttccacatcggaggacaaaggacagcgagaggggagaagaaaaggacaaacaa
aggcaagtgaaggagactgccatggcagattcagagaaggtttcagagaccaatgaggag
acaccaaaggctttctcagcacgcaagatctctcttagtaacagtaaatcctccccaggc
actgtgagtgcagagggcgaacaggagtctgggactgtggctgctcgcaaaaggagatgg
ggctcaagcacagctgttactgccaagaaaccttctatcagcatcaccactgattcactc
aagtctctgattcctgacataaggccgtgtctgggccaggaggccgtcgtggaccttcac
cctgaagaagcagccatctctggcacagaggatgaagatacagagcgctctgaccaggac
cttcagatccgacgcaccgtcacacaggtggtgcatgcagaaagccaagagaatggtcag
aaagaagcaaagaggagcaagcgggaggagatggaggaagagaactctcagctagaccag
gaaaggataaagacccatgaaaagcagatggacatttcccttcccgaacccgtggaaacc
cagtcgccaccacattccagccctgatgtagaaactaacactgtgacccctagcgacacc
ctcattcgtcgctccatcagccagcagaaatcaggtgtgtctatcacaatcgacgaccct
gttcgcacggcccagcaaccctcgccaccacgaggaaaagtctccaatattgttcacgta
tgcaacctggtgaggcccttcacactggggcagctgaaggagctgctcggcagaactgga
agtctggtggaagagggcttctggatcgataaaatcaagtcccactgttatgtcacttat
tctagtacagaggaggcagtcgctacacggacagctcttcatggagttaaatggcctcaa
agcaacccaaaagtcctcagtgttgacttctgccagcaagatgagttggacttccacaaa
ggtttgggtgcagcagttggacctggaggagaggagcaaggtcctgctcccggccgcggg
cggacattaggcctgccttcacttctccccgagcgcgaccaatgggccgagcgcgaacgc
gagatggaacgcagagagcgggcgcgggctgagcgggagtgggaccgcgacaaggtcaga
gagtttgggaaacctgaagaagagaaagagggagctccacgcaggtcacgctccagagag
aaacgacgcaaggagcgcgggaagagcaaggagaagaagatggagaagaaggctgaggat
ccccctgcaaagctgcttgacgacttgttccgcaaaactaaagcggctccttgcatttac
tggcttccacttacagaggagcagtatctccagcgggaagttgccagggcagagcggatg
aaggagcgtgagaaacgaagaaaggaactagaagaagaggaggagaaaaaaagggaagag
gagcgcaaagagaggatgaaagctacaagtgccgccgcaacaggagacaggagtgagggt
gagaaggacaaggagcgggacagagagagggacagagaccgaggcagggatagggaccgg
gagagagagcgggacagggagagagcgagggagagggacagggacagggagaacgacaaa
cgcagggatggctaccgtagaccagggggcagcgggacagggacgggtcgacgctcacgt
agccgcagtgaaccaagagaacggagacgctga
DBGET
integrated database retrieval system
