Cololabis saira (Pacific saury): 133454487
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Entry
133454487 CDS
T09849
Symbol
shroom3
Name
(RefSeq) protein Shroom3
KO
K18625
protein Shroom
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133454487 (shroom3)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
133454487 (shroom3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASD2
ASD1
Motif
Other DBs
NCBI-GeneID:
133454487
NCBI-ProteinID:
XP_061589196
LinkDB
All DBs
Position
11:46032644..46130346
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AA seq
1745 aa
AA seq
DB search
MESGARAGLRAADGEGEGGGWMLVEARLQGGAPWGFTLQGGLEHGEALVISKVEQGGKAN
RLEQPLLVRDELIVINDVELSGYRQEAIALIKGSYKSLELTVRRGFNPGNMEDFVTATNC
LPVLPLSSPLSFQLPPSSPPLQPTFHSSNHSWGSASHLIINNGHREPSSRPHSWHSTKIG
EGQQDQGAMDTMNNAWPQSYHSSVSTADLCGGFDSSGSYLRKSPDQYSSRGSMESLDPPP
SSQLHSAAQHHHPLEHRANIGYHPAYSCHQLSSARSSNSIDHPHSKRDSAYSSFSTSSSI
PDYLASNPCFRTERSYSMETVPQRGGGSAEMLQADIRHARTPYDIQHGGSQDRELSSAST
GLLTSSNSRGRVRTGPSGVVCYRGTSSGKTSCRNSSGTSVSNRHSVGPIWGSTSRHSSYE
SLKGAPAPPRRSDSYTAIKNHDRPNSWSSLENVRSLRSQQKGSWHHSSSSVASGKGSYGI
EGQLHTVIEKSPESSPTTKPPARWGVPPAPFLLWKLLARGSGVPAPDPADHTGKLKEGKQ
MDRLGLKSVQITMALQRLAGSSLSGLEPQRPGQRQRKPLTRLELALAEVQRCSSPDHVLS
AKNHNVNVNDSAHGCAHSLSVLEKVSCFERRERSEKQRGQSAHLRMTEKGRGGPCGTDDL
RNMLERSTKGIKAHRTMSYRGGSSEYMKHRTPADPSSALQRSRSTFQLDSSRPRDFPWRQ
DIQDMNDPLHDMSSNRQSDLKPTPSNAPLTVSSSSSHQQSTVPTKYFSQEKKGPQTMPKP
QGILVTPRSLTSLPSPHTPKERHVISPDVRGPSPPALPSVPPVGAAPLIRICGRKRLTAD
QKKRSYSEPENMNKVGVSGSEALFQCGGETSVADRRRMFELAVSHAGGRAPQSAISRPEL
RQAQQDALADYVDRKRGVKREGGEQRSGSRPHSAHQHHEHGSHTDSLSMSSASSQLSLQD
SAPDQIERSFYPTVPPGADINSLQSSFFYPGRVTSQRPPARPAPSASPGFTVERAQIPHL
PPEADIRKQSPAHQHPQQARETQLARGVSEEHDVVLQRTASSRRPQKSASAEDLLAYKDG
PTSSQHYWSHASATAEKLNQGFLPEDIRMVDVLFPESGGCANAADCPVSSHMSGDLVSPV
PSQCTHSVTQLEQSAQDYCHTPVTRRERQKNGERQRANSTSALAASVGLPCDFSPLMTAE
RGTAEWKASERLSQANLDAITFPDIPQTGPADDDAAAAGAPGNRKSVTMDGQSRDSSTSD
DTKKETGRSRVSSSEMRERHSPEKAKLGTSALLPHGETFSPNRESDERAPSSPSSRSSVH
RHLSSLRISESSLLGSLDQQHPLETVPRFPPEDFDEVFLQNNNCKPFPETHETNITEDFP
PPPPPLKQDTQQQPQPSSVTAFTTEHNLGFEYQLLPKREKTSEELRAEDLAHQLVLQDPS
LASFLDTWGSKSIVELMEEMFPNSRLTGTSGWQRRGSVQVEDRVQPGVRNPAQTVTDQRR
KETDLDEEEKDLNIRKVELCEALRSSVAALERDKQALCEEQSSHQALGGSIELLVQERLK
TNERDKYIMFIGDLEKIVNLLLSLCSRLARINRSLLALEKDKTMMSQEAKEERDSLHHKR
LQLLRQTEDARELKENLDRRQRVVHAILSSYLTAEQLQDYCRFVGTKPSLLIRQRHLDEL
IRHGGEQLRRLAESLPAEVTEAHSWLKACRLSNPTLCFSLFSSLVPPSVTPAATQPLRSA
SVTPL
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggagcccgggcggggctccgcgcggcggacggggaaggggaaggaggcggc
tggatgttggtggaggcccggctgcagggaggagcaccgtggggcttcaccctgcagggc
ggcctggagcacggggaggcgctggtcatctccaaggtagaacagggcggtaaagcaaac
aggctggagcagcctctgcttgtcagggatgaactcatcgttattaacgatgtggagctg
agtggataccgacaggaggccatcgcgctcatcaagggatcctacaagtctctggagctc
actgtccggagggggtttaatcctggaaatatggaggactttgttactgcaacaaactgc
cttcctgttcttcccctgtcttctcctctctcttttcagttaccaccctcgtcaccaccc
ctgcaaccaacatttcactcatccaatcacagctggggatcagcatcccacctcatcata
aataacggacacagggaaccttcctctcgtcctcattcatggcactcaacaaagattggt
gaaggtcagcaggaccagggagcaatggacaccatgaacaacgcctggcctcagagttat
cattccagtgtctcgacagcggacctgtgtggcgggtttgactccagcgggagctacctg
aggaagagcccggaccagtacagctccaggggcagcatggagagcctggaccctcctccg
tcctcccagctccactctgcagctcagcaccaccacccactggaacaccgcgccaacatc
gggtaccacccggcctactcctgccaccagctgtcctctgccaggtcgtcaaacagcatt
gaccacccgcacagcaagcgagactctgcgtactcctccttctccaccagctccagtatc
ccagactacctggcctccaacccctgtttcagaacagagcgctcctactccatggagact
gtccctcagagaggggggggcagtgcagagatgctgcaggctgacatacgtcacgcccgt
acgccgtatgacatccaacatggaggctctcaggaccgtgagctgagctccgcctccacc
ggattgctgactagcagcaactccagaggccgagtgagaacaggtccaagtggtgttgtg
tgctaccgcgggaccagcagtgggaagactagttgcaggaacagcagcggtacgtcagtt
tcaaaccgacacagtgtggggccgatatggggatcgacctccagacacagctcctatgag
agcctgaagggggcgcccgctccacccagacgcagcgacagctacaccgccatcaagaac
cacgacagaccaaactcctggtctagtctggagaatgtccggtcgctcagatctcagcag
aaaggttcctggcatcattccagcagctctgttgcctcgggtaaaggttcgtatgggatc
gagggtcagctccacaccgtcatcgagaagagtccagaaagcagtccaaccacaaaaccc
ccggcaaggtggggggttcctccagccccatttctcctctggaaactcctcgctcgagga
tcaggagtcccagcaccagaccctgcagaccacacgggaaaactaaaggagggaaagcag
atggacagactggggctcaaaagcgtccaaatcaccatggccttacaaagactcgccggc
tcctcgctgtcaggactggaaccacagagaccaggacaacgacagagaaaaccgctgacc
cgcctggagctggccctggctgaggtccagcggtgctccagccccgaccatgttctctcc
gccaaaaaccacaacgttaatgtcaatgacagtgcccatgggtgtgcccatagtctttct
gttttggagaaagtcagctgttttgagcgtcgggaacgcagtgaaaagcagcgcggtcaa
agtgctcatctgcggatgactgaaaaaggccgcgggggcccctgtgggacggatgatctt
agaaatatgcttgagagaagcaccaaaggaatcaaagcccataggacgatgagttacaga
ggaggcagcagcgaatacatgaaacacaggactccagcagatcccagctctgccctccag
agaagccgcagcaccttccagctggactcctccaggcccagagacttcccttggaggcaa
gacatccaggatatgaacgaccccctgcacgacatgtcgtctaacagacagagcgacctc
aaacccacgccttctaatgctcctttgactgtgtcctcatccagcagtcatcagcaatca
actgtccctaccaagtatttttcacaagagaagaaaggcccccaaaccatgcccaagccc
cagggcatcctcgtcacgccacgttctctaacatcgctgccttcccctcacacgccaaag
gaaagacacgtgatcagcccagacgtccgaggcccgagccccccagccctccccagtgtc
ccaccagtcggagctgctccgctcatcaggatctgtggacgcaagcgtctgacagccgat
cagaagaaacgttcatattcagagcccgagaatatgaacaaggtcggggtttcgggtagc
gaggcccttttccagtgtggaggagaaacgagtgtggcagaccgacggaggatgtttgaa
cttgcagtaagtcatgctgggggcagggctccccagagcgccatatcaagacccgaacta
cgacaggctcagcaagatgctctggcagactacgtggacagaaagaggggagtaaagaga
gaggggggagagcagcggagtggatcaaggcctcacagcgctcatcagcaccacgaacac
ggcagccacacagactccctcagcatgtcttctgcctccagccagctctccctgcaggac
tctgctccagatcaaatcgagaggtctttttacccaaccgtccctcctggtgcagacata
aacagtcttcagtccagctttttctacccgggcagggtgacatcacagaggcctcctgca
cgtccagcacccagtgcttctcctggcttcaccgttgagcgtgctcagatcccccacctc
ccccccgaggccgacatcaggaaacagagtccggcccaccaacatcctcagcaggccaga
gagactcaactcgctcggggagtttctgaagagcacgacgtggtgctgcagaggacggcc
tcgtctcgccggcctcagaaatcagcgtctgctgaggatctcctggcttacaaagacggg
cccacctcttctcaacactactggtctcacgcctctgcgacagcagagaaactcaaccag
ggcttccttccagaagacatcaggatggttgatgtcctttttcctgaatcagggggctgt
gctaatgctgctgattgtcctgtaagcagccatatgtcaggagacctggtctctcctgtg
ccatcccagtgtacacacagcgtcacccagctggaacagtctgctcaagactactgccac
acccccgtcactcgtagagagcgtcagaagaacggtgaacgccagcgcgccaacagtacg
tctgccctggcggcctctgtcggcttgccctgcgacttctctcccctcatgactgcagag
agaggcaccgccgagtggaaagccagtgagaggctgagccaagccaacctggatgccatc
accttcccagacatcccccaaaccggccctgctgatgatgatgctgctgctgctggcgcc
cccggcaacaggaagagtgtgacgatggatggacagagcagagacagcagtacatcagat
gacaccaaaaaggaaacaggcagaagcagagtctccagttcggagatgagagaaaggcat
tccccagaaaaggctaaacttggcacgtcagcattattaccacatggcgagactttctcg
ccaaacagggagagcgatgagcgcgcaccatcttcaccatcctcccgttcatctgttcat
cggcacctgtcctctctaagaatctctgagtccagtcttcttggctccctcgaccaacag
catccactagaaactgtcccaaggtttccaccggaggactttgatgaagtgttcctccaa
aataacaactgtaaaccatttccagagacgcacgagacaaacattacagaggacttccct
ccgcctcctccaccattgaagcaggacacccaacagcagccgcagccgtcctccgtcaca
gcatttacaactgaacacaaccttggttttgagtaccaactgctgcccaagagggagaag
acatcagaggagctccgagcggaggacctggctcatcagctggtgctgcaggatccctct
ctggcatcctttttggacacgtgggggagtaaatccatagtagaactgatggaagagatg
tttccgaacagccggctgactggtacatcaggttggcagcgcagaggcagtgtccaggtg
gaggacagggtccagcctggtgtccgtaatcctgctcagacggtgacagatcaaaggagg
aaggagacagacctggatgaggaagagaaagacctcaacattaggaaggttgaactgtgt
gaggcgttgaggagcagcgtggcagctctggagagagacaagcaggcgctgtgtgaggag
cagagcagccaccaggctttggggggcagcattgagctgctggtacaggaacgcctcaaa
acaaacgagagggacaagtacattatgttcatcggagatctggagaagattgtgaacctt
ctgctgtctctatgtagtcggctggcgaggatcaatagatctcttcttgctctggagaaa
gacaaaacgatgatgtcacaggaagcaaaagaggagagggattcccttcatcacaaacgc
ttgcaactcctacgtcaaactgaagacgcccgggaactgaaggaaaacttggaccggcgg
cagcgtgtggtccacgccattctttccagctacctcactgcagaacaactccaagactac
tgccgctttgtcggcactaaaccctctctcctcatacgccagcggcacctggatgaactg
atacggcacggtggggagcagctcaggaggctggcggagagcctgcctgcagaggtgacg
gaggctcacagctggctgaaggcctgtcgcctctccaaccccacgctctgcttttctctc
ttttcctcactggttccaccctccgttactcctgctgccacccagccgctcaggtccgcc
agtgtaacgccactgtga
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integrated database retrieval system