Cololabis saira (Pacific saury): 133454495
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Entry
133454495 CDS
T09849
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133454495
04121 Ubiquitin system [BR:
csai04121
]
133454495
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
133454495
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
133454495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Tmemb_cc2
GerPC
Motif
Other DBs
NCBI-GeneID:
133454495
NCBI-ProteinID:
XP_061589203
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Position
11:1011210..1014508
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AA seq
494 aa
AA seq
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MMPIRVVTTPGFIDLVRTLDKRYRMPSRTHFSQVAIPALYKKCRQRVAAELKTVEFFATT
TDLWSSRRTEPYQSLTVHFIDQDLKLKARCLQVSYFPDDHTGENIAAGLREGLAGWDLPE
ENHVCITTDNAANMVLAAQLNDWTRLQCFGHRLHLAIGHALKDDRVSRAVGLCKKVVGHF
SHSWKKKAAMSEAQRELKLPEHSLITECPTRWGSKEMMIARVLEQLKAISQVLSGDRYAR
SLIPTWQDIDVLESIHKALHPLLDFTDALSGEEYVSISYLKPVLHLLATSILAEDQEDTD
LTRSIKNKVLAYLNEKYKDPIIQELLDVASFLDPRFKTRYITADNIPTVKTRLKTEMLES
ARRAYNQEKRSRTESTQSAQPSGEKVKKSLGSFFKTAVASSASPVQPEDVAEAELNSYLM
TPAIDGEDDPLAWWKVHKINFPRLCNMARKYLCVPATSAPSERLFSAGGNIVTCTRSSLK
PAKVDMLVFLAKNL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccattcgtgtagtgaccacgcctgggtttattgatttggtacgcacactggat
aagcggtaccgaatgccgtcacgcacacattttagccaggtagccatacctgcgctatat
aaaaaatgcagacagagagttgcagcggagctgaaaacagtggagttttttgcaacgaca
actgatctttggtcaagccgcagaacggagccataccaaagtctaacggtgcattttatc
gaccaagacttaaaactcaaggcgcgctgtcttcaagtgtcctatttcccggacgaccac
acgggagaaaacattgcagccggcctgagagagggtctcgccggctgggatctaccggaa
gaaaaccacgtctgcataacgacggacaacgcagctaatatggtgctggcagcacagctg
aacgactggaccagactgcagtgttttgggcacagattacatcttgccatcggacatgca
ctcaaagatgacagagtgtcaagagcagtagggctgtgcaagaaggtggtggggcacttc
tcccacagttggaagaagaaggcagcaatgagtgaagcacagagggagctcaaacttcct
gagcacagtcttattactgaatgcccaacaagatggggatccaaggaaatgatgattgcc
agggtgctagagcagctcaaagccatttcgcaggtgttgtctggtgaccgatacgcacgc
tccctcatcccaacctggcaggatattgacgtgttggagtctattcacaaggcactgcat
cctctcctggactttacagatgctctctcaggagaggagtatgtgagcatctcctacctc
aaaccagttcttcaccttctagccacatcaatcctggctgaagatcaagaggacactgac
ctgactaggtcaatcaaaaataaggtcctggcatacctcaatgaaaagtacaaggacccc
atcatccaggagcttttggatgttgcatccttcctggatcccaggtttaaaacccggtac
atcactgcggacaacattcccactgttaagacccgactcaagactgaaatgttggaatca
gcaaggcgtgcatataaccaggagaagaggtctcgaaccgaaagcactcaaagtgcacag
ccctctggcgagaaggtgaagaagtctcttggcagtttcttcaagactgctgtggcctct
tctgcttctcccgtgcaacctgaagatgtcgctgaggcagagttaaatagttacctcatg
acccctgccattgatggagaagatgaccccttggcctggtggaaggtgcacaagatcaac
tttccacgactgtgcaatatggcccgcaagtacctctgtgtccctgccacaagtgctcct
tcagagcgtcttttcagtgctggagggaatatcgttacttgcactcgctcatctttaaaa
ccagcaaaagttgacatgctggttttcctggcaaaaaatctgtga
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