Cololabis saira (Pacific saury): 133454560
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Entry
133454560 CDS
T09849
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133454560 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133454560 (hnrpkl)
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
hnRNP proteins
133454560 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
133454560
NCBI-ProteinID:
XP_061589263
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All DBs
Position
11:11311667..11338213
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AA seq
431 aa
AA seq
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MEMEMKVDQQDEDITFSNTDTNGKRPAEDMDEEHAFKRSRNTDEMVELRVLLQSKNAGAV
IGKGGKNIKALRTDYNASVSVPDSSGPERILSVNANIDTIGEILLKIIPTLEEYQHYSGI
DFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPER
VVECIKVILQLISEAPIKGRAQPYDPNFYDETYDYGGFTMLFEDRGRRPMGGFPIRVRTG
FERLPPVRISRPMPSSRREYDDISPRRGPPPPLSRGGRGGSRARNLPLPLPPPPRGGGDR
FSHGSYHSSLDDRPSDRRSRGDRYDSMGGGGYDNSSWEHFQYGGRGSYSDIGGPVITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ
NSVRQYSGRFF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagatgaaagtcgaccagcaggacgaagacattacattcagcaacactgac
acgaatggtaaacgccctgctgaggacatggacgaggagcatgcctttaaacgttcacgc
aacacagatgagatggtggagctccgtgtgttgcttcagagcaaaaatgccggtgcagtt
ataggaaaaggtggaaagaacataaaagcccttcgcacagactacaatgccagtgtatca
gtcccagacagcagtggcccagagcgcatcctcagtgtgaatgccaacatcgacacgatt
ggagagattttgctgaaaataataccaactctggaggagtaccagcactacagcgggatt
gactttgactgcgagcttcgcctgttgatccatcagagcctggcaggtggcatcattgga
gtgaaaggagccaaaataaaggagctgagagagaacacccagaccaccatcaagttgttc
caggagtgctgtccacactccacggacagagttgtgctggtgggtggaaagccagaacgc
gtcgttgaatgtataaaagtcatcctgcagctgatatcagaggcgccaatcaaaggtcgc
gcccagccttacgaccccaacttctacgatgagacgtacgactacggcggcttcaccatg
ctgttcgaggacagaggcaggcggcccatgggggggttccccattcgcgtgcgtaccggt
tttgagcgtctgccgcccgtgcgtatcagcagacccatgccgtcctccaggagggagtac
gacgacatcagcccccgccggggtcctccacccccgctcagcagagggggtcgagggggc
agccgagcacgtaaccttcctcttcctctgccgccgccaccgagaggaggaggagacaga
ttctcacatggaagttatcatagcagcttggatgacagaccaagtgacagaagaagcaga
ggagaccgttacgacagcatgggcggaggtggatatgacaattcttcctgggagcacttt
cagtatggtggtagaggctcgtacagtgatatcggaggaccagtcatcacaacgcaagtc
accatcccaaaggatctcgccggctccatcatcggtaagggcggtcagaggatcaagcag
atccgccacgagtctggggcatccatcaagattgatgaaccactagagggctctgaggac
cgcatcatcaccatcacagggacacaggaccagatccagaacgcccagtacttactccag
aacagcgtgaggcagtactccggtcggttcttctga
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