Cololabis saira (Pacific saury): 133454589
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Entry
133454589 CDS
T09849
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133454589 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133454589 (usp43a)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133454589 (usp43a)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133454589 (usp43a)
Ubiquitin system [BR:
csai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133454589 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
133454589
NCBI-ProteinID:
XP_061589330
LinkDB
All DBs
Position
1:complement(7645354..7950804)
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AA seq
1199 aa
AA seq
DB search
MDARKVRKQPLKPKTSKKYKHGGLKRRKSLRSFGNFMERILKTLGTLAHLGDPEPQTRNE
DEDDGGFGGGFSTRGPSGRSPGARDGPGPRGSVLRGPGDQQTPGALGLQNHGNTCFMNAV
VQCLSNTDLLAEHLGLEQYKGGAGAPWGPRRDPRVPGGPGVPGGVQDGARGEVTEQLASL
VRALWTLEYTPQLSVDFKSIVAKYGSQFRGNSQHDALEFLLWLLDRVHEDANQSSDGKTN
AKPTAKGPGSSENPSHPSPASAQNPRSRHSFVQELFQAQYRSSLTCPHCLKQSNTFDPFL
CISLPIPLRQTRPLCVTLVFSSKGQRYLRVGLAVPLFGAVSCLRAMVAAEGNISAEQVVL
TELYSTGFQRSFWDDDDLTAVAESDVVYAFQAPPFSSRGGSSALSGHHHSLPSSPYSSGP
DGQRLPPSGHLSSEFLNQSSSSKVLLLVCNTAGSGQQAVRFGPPFLMREDRNLSWEQLQQ
SMLSKFYYLMLSGSQVQNAGVLFKIRVVGGSAAYSYLSPHDSRPLHHPAVDRALKFCGPG
GPPHVKLVIEWEHSSKESLFGSIQEEVVKDADSVRTQQQQHLQQHSCTLDESFQLYTKEE
QLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLSTLVRFPLSGL
DMAPHVTKRSQSMKNLQQGSSQPSRKQHHQPADLTLPHDYLYDLYAVCNHHGGMHGGHYT
AYCRNSVDAQWYSYDDSSVDLVPQEEVVTKGAYILFYQRRNNIPPWSASSSIRGSTSSSM
SDHWLTRLTGDSKRGSLVSRSSSAFTSVADPPDSPVFQDEPVKEGRGGFESRPFVRGVKG
RSKSMRAPSKARDSLSKVLPLRWSFGSKDRRKPDQVPPPAQDPAPVELGCTKEPIAALMS
ESRGKKEAGGGRAAAAATGRSSSAGSLSCVGKSAEEPPYPQVPEGQRRPSEKTASLKRNK
GSQSKEESAANISTSFSSNTLTRRKDARKQISSKSSQETETKPSSGTAIHPSFSAPSIQG
GTLRRPKGANKDQHGATDENPRKEDVQKSHDGLFSFLKGNFLKKDKDPRKSKEAESGRGT
DDEGGRRTLSKASLSNGAAGGRTAADEGKSKSSGRQADGLVNGKPGRAAGDIKRSQSSSN
IPTKAEQNMRRTASLHRNGTSAAPSRSLAADKPSYGTLQRNRYSTTSLGRKRTVPESSF
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccgcaaggtgcggaaacagccgctcaaacccaaaacgtccaagaaatacaag
cacgggggcttgaagaggaggaagtcgctgcggtccttcgggaatttcatggagcggatc
ctgaaaactttgggcactttggcgcacttgggggacccggagccgcagacgcgcaacgag
gacgaggatgatggaggtttcgggggcggcttctcgacccggggcccctcaggacggagc
cccggggcccgggacggacccgggccccggggctctgtcctgaggggccccggggaccag
cagacccccggcgcgctggggctccagaaccacggaaacacctgcttcatgaacgccgtg
gtgcagtgtctgagcaacaccgacctgctggccgagcacctgggcctggagcagtacaag
gggggggcgggggcaccctggggcccccggagggaccccagggtgcccgggggccccggg
gtccccgggggcgtccaggacggggcccgcggggaggtcaccgagcagctggcgtcgctg
gttcgagccctgtggacgctggagtacacgccgcagctgtccgtggacttcaagagcatc
gtggccaaatacggctcccagttccgaggaaactctcaacacgacgccctggagttcctg
ctctggctcctggaccgagttcacgaagacgccaatcagagctccgacggcaagaccaac
gccaaacccaccgccaagggtcccggttcctctgagaatccctcacatcccagtccagcc
agcgcccagaaccctcgcagccggcacagctttgtgcaggaactcttccaggcccagtac
aggtcttcactgacgtgccctcattgccttaagcagagcaacacctttgacccgttcctg
tgcatctccctgcccatccccctgcgacaaaccaggccgctgtgcgtgacgttggtgttc
agctccaagggccagcgctacctgcgcgtggggctcgccgtgccgctgttcggggccgtg
tcctgtctgagggccatggtggcggcggagggcaacatctctgccgagcaggtcgtcctc
acggagctctactccaccgggtttcaacgctccttctgggatgacgacgacttgaccgcc
gttgccgagagcgacgtcgtctacgccttccaggctcctcccttctcgagtcgcggcggc
tcctcggcactctcagggcatcaccacagcctcccctcgtctccgtacagctccgggcct
gacggccagcggctgcctccgtcgggccacctctcctccgagttcctgaaccagagcagc
tcctccaaggtcctgctgctcgtctgcaacacggcggggtcgggccagcaggccgtccgg
ttcgggcctcctttcctcatgcgtgaggacaggaacctctcctgggagcagctgcagcag
agcatgctcagcaagttctactatctcatgctgagtggatctcaggtgcagaatgccggg
gtgctgttcaagatccgagtggtgggcggatctgcagcctacagctacctgtctccacac
gacagccggccgctgcaccacccggcggttgacagagctttgaagttctgtggtccgggc
ggaccgccacacgtgaagcttgttatcgagtgggaacacagctccaaggaaagcttgttc
ggcagcatccaggaggaggtggtgaaggatgccgacagcgtgaggacgcagcagcagcag
cacctgcagcagcacagctgcaccctggacgagagcttccagctctacacgaaagaggag
cagctggccccggacgacgcgtggaagtgtccccactgcaagcagctgcagcagggcatg
gtgaagatgagtctgtggacgctgccggacatactgatcctgcacctcaagcgcttcaga
caggttggtgagcgaagaaacaagctgtccaccctggtgaggttccccctctctggtctg
gacatggcccctcacgtgaccaagaggagtcagagcatgaagaacctgcagcagggctcg
tcccagccctccaggaaacagcaccaccagcccgcagacctgaccctgccccacgactac
ctgtacgacctctacgccgtgtgcaaccatcacggagggatgcacggaggacactacact
gcttactgcaggaactcggtggatgcccagtggtacagctacgacgacagcagcgtggac
ctggtgcctcaggaggaagtggtcaccaaaggagcttacatccttttctaccagagacgc
aacaacatccccccgtggtcggccagcagctccatcagaggctccacaagttcctccatg
tcggaccactggctcaccaggctgacgggggacagcaagagaggcagcctggtgtctcgc
tcctccagcgccttcacctccgtagccgaccccccagactcccccgtcttccaggatgaa
cccgtcaaagaggggcgagggggctttgagagcagaccattcgtcagaggcgttaagggg
cggagcaagagcatgagggcccccagcaaggccagggacagcctaagcaaagtgcttcct
ctgcgttggtccttcggttccaaggacagacgaaaacctgatcaagtgcctccgccggcc
caggatcctgcccccgtggagctggggtgcacaaaggaaccgatagcggcgctgatgagt
gaatcgcgcggcaaaaaggaagccggcgggggccgtgcagccgccgccgctacaggtcgg
tcctccagcgccgggagtctgagctgcgtggggaagtcggcggaggagccgccgtatccg
caggtcccggagggccagagacggccctcggagaagacggccagcctgaaacgcaacaag
ggaagtcaatcgaaggaggagagcgcggcgaatatcagcaccagcttcagcagcaacacc
ctcaccaggaggaaggatgccaggaagcagatctcctcgaagtcttcgcaagaaacagaa
accaaaccgagctcgggaactgcaatccatcccagcttcagcgcgcccagcattcagggt
gggactctgcggagaccaaaaggggctaataaggatcaacatggtgcaactgatgaaaac
cccaggaaagaagacgtgcagaagagccacgacggtctgttctctttcctcaaaggtaac
ttcttgaagaaggacaaagacccgaggaagtccaaagaggccgaatcagggagagggacg
gacgatgaaggaggcagaaggaccttgtcaaaggcctcgttgtccaacggagccgcggga
ggcaggaccgcagcggacgagggaaagtccaaaagctcaggccgtcaggccgacgggctg
gtgaacgggaagccgggacgcgccgcgggagacatcaaacgctcccagagctcgtccaac
atacccaccaaagcggagcagaacatgcgcaggactgcgtccttacatcgtaacgggacg
tctgcggctccgtcgcggagcctggccgcggacaaaccgtcttacggcaccctgcagaga
aatcggtacagcacaacctcactgggccgaaagaggacggtcccagagtccagcttctga
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