Cololabis saira (Pacific saury): 133454609
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Entry
133454609 CDS
T09849
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a isoform X1
KO
K24901
homeobox protein orthopedia
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133454609 (otpa)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133454609 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
133454609
NCBI-ProteinID:
XP_061589313
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Position
11:complement(19045295..19050689)
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AA seq
338 aa
AA seq
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MLSHADLLDARLGELTSPNSGLQLYWMKDAAAELLGHREALKCRLGGGGADPGHAGELGP
GPDGVEGATMLPGDDISSGGGSNAVQVNSKEQEKQHQQQQSGNGGSNNNPNQSNQQSQKQ
KRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKK
TTNVFRAPGTLLPTHHGLPQFPSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQLPP
ALGRQQAMAQSLSQCSLGAGPPPNSMGLSNMSSNGSGLQSHLYQPTFPGMVPASLSGPSN
VTGSPQLCSSPDSDMWRGTSIASLRRKALEHTVSMSFT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctatctcacgccgacctcctggatgctcgcctcggtgagttaacatcaccaaactcc
ggtcttcaactctactggatgaaggatgccgccgcggagctgctgggccacagggaggct
ttgaagtgcaggctcggcggcggtggagccgacccgggccacgccggggagctcggcccg
gggccggacggcgtggagggagcgaccatgctccccggggatgacatcagcagcggcgga
ggctccaatgcggtgcaggtgaacagcaaggagcaggagaagcagcaccagcagcagcag
agcggcaacggtggcagcaacaacaaccccaaccagtccaaccagcagagccagaaacag
aagcggcaccggacgcgcttcactccggcgcagctcaacgagctggagcgcagcttcgcc
aagacgcactacccggacatcttcatgcgggaggagctggctctgaggatcggcctgacg
gagtccagagtccaggtctggttccagaaccgtcgtgccaagtggaagaagcgcaagaag
accaccaacgtgttccgagctccggggacgctgctgcccacgcaccacggcctgccccag
ttcccgtccgccgcggccgctgcggcggccatgggcgacagcctctgctccttccacgcc
aacgacacccgctgggccacggccgggatgccgggcgtgtcccagctgcagctgccgccc
gccctgggccgccagcaggccatggcgcagtccctgtcccagtgcagcctgggcgcgggg
ccgccgcccaactccatggggctgtccaacatgtcgtccaacggctccggcctgcagtca
catctgtatcagcccactttccccggaatggtccccgcgtccctgtccggtccctcaaac
gtgaccggctcgccccagctgtgcagctctccggacagtgacatgtggcgggggacgagc
atcgcgtcgctgcgccgcaaagcgctggagcacacagtatccatgagcttcacctag
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