Cololabis saira (Pacific saury): 133454701
Help
Entry
133454701 CDS
T09849
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csai03016
]
133454701
Enzymes [BR:
csai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
133454701
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133454701
Prokaryotic type
133454701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
133454701
NCBI-ProteinID:
XP_061589416
LinkDB
All DBs
Position
11:29552447..29555668
Genome browser
AA seq
423 aa
AA seq
DB search
MLHVPTLLRTFLTRRTLERNAGGFLKLFSTMSEGDTERRGKQLKRATEENEDSAERAAKT
ARAEEKNTEKDKKYPKKKVVLLLAYSGKGYYGMQRNCGNSQFRTIEDDLVSALVKAGCIP
EGHGDDMKKMSFQRCARTDKGVSAAGQIVSLKLWLIEDIVEKINENLPPQIRVIGCKRVT
QGFNSKNNCDARTYSYMLPTVAFAPKQQTWQDSKLGDIAAFRLEPETIPRVNRLFALYKG
THNFHNFTSQKAPNDPSARRYISEMSCGEPFMCNNYEFAVITVRGQSFMLHQIRKMIGLV
IAVIKGYAKEEVMERSWGQQKVDVPKAPGLGLVLEMVHFTRYNERFGKDGVHERLEWDVE
KEAIKAFKEAHIHPTIVETECQEGSMVSWMSNLPIHDFEATATGTRDSKDQKQDNAGEGN
DSD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgttccgacgctgttaaggaccttcctgacccgcaggacgctggagagaaac
gcaggtggctttttgaagctgttcagcacaatgagcgaaggcgacactgagcggagagga
aagcagctgaagagagcgacagaagagaatgaggactctgctgagagagccgccaaaaca
gcgagagcagaggaaaagaacacagaaaaggacaagaaatatcccaagaaaaaagtggtt
ctccttctagcatactctgggaagggatattatggcatgcagagaaactgtggaaactct
cagtttaggaccattgaagacgatctggtcagtgctcttgttaaagctggctgtattcct
gaaggccatggtgatgacatgaagaagatgtcttttcagagatgtgccaggacagacaag
ggtgtgtctgctgctggtcaaatagtgtctctgaagttatggttgattgaggacatcgtt
gaaaaaatcaatgaaaatctgccaccacagattagggtgattggatgcaaacgggtgacc
cagggctttaattccaagaacaactgtgatgctcgtacatattcctacatgcttccaaca
gtggcctttgccccaaaacaacaaacttggcaagatagcaaacttggcgatatagcagca
tttcgactcgaaccagagacaattccaagggtgaaccggctctttgctctctataaaggc
acccacaactttcacaacttcacctcccagaaggctccaaatgatcccagtgcccgtcgc
tacatctcagagatgtcctgtggagaaccttttatgtgcaacaattatgagtttgcagtg
attaccgttcgaggtcagagctttatgctgcaccagattcgcaagatgatcggcctggtg
attgcagtaatcaagggctatgcaaaggaggaggtgatggagcggagctggggacagcag
aaggtagatgttcccaaagctccgggacttgggctggtcctcgaaatggttcacttcacc
cggtacaacgaacgcttcggaaaggatggtgtacacgagcggctggagtgggatgtggag
aaagaggcaatcaaagcctttaaagaggcccacatccaccccaccatcgtggagacggag
tgtcaggagggctccatggtcagctggatgtctaaccttcctatccatgattttgaagcc
acagccactggaacaagagacagcaaggaccaaaaacaggacaacgcaggggaaggaaat
gactctgattag
DBGET
integrated database retrieval system
