Cololabis saira (Pacific saury): 133454789
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Entry
133454789 CDS
T09849
Symbol
hpse
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00531
Glycosaminoglycan degradation
csai01100
Metabolic pathways
Module
csai_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
133454789 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133454789 (hpse)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
133454789 (hpse)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Enzymes
133454789 (hpse)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
133454789
NCBI-ProteinID:
XP_061589495
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All DBs
Position
11:42931740..42954490
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AA seq
562 aa
AA seq
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MKSVLLLVLQLFSWTGGSPCCTWFRPPDGPVDRVQDRDQDWDQLQDQVQDLALELDGSAV
LHRLDPRYLSVTVDASLAAQEKFMLLLRSEKIRTLARALSPAFLRFGGTRQDFMVFTPEK
ELQLDPDVSGGLAGPCVSCPGPCVDARLPWWWEERLKADWTRQQQVLVREDLQRKYRRIG
FSELTVDMLHSFSSCSGLDLIFGLNALLRTADNSWNSSNADMLLRYCQARRYRLDWELGN
EPNSFEKKAGIRVDGYQLGLDFTHLRKMMSESELYRDAGLYGPDVGQPRDHRADILEGFL
QSGADAVDALTWHHYYVNGRDTSLEDFLDPEVLDTLALKTNEVMERVKEASPGKAVWLGE
TSSAYGGGALGLSDTFVAGFMWMDKLGLAARLGLGVVMRQVLLGSGSYHLVDENLDPLPD
YWLSVLHKKLVGPEVLKAQAVSGVGRSKRVRVYLHCASKTSYGGGAVVLLAMNMSKKPAR
ISVPALVSNSTVDAFVLQSEQRGEEGLLSRSVQLNGRLLKMVDDKTLPPLTGEHLPAEDH
LQLPAYSLAFFVFVDAGVAACH
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggtcctgctgctggttctccagctgttctcctggaccggcggatccccctgc
tgtacctggttccggccccctgatggacccgtggaccgggtccaggaccgggaccaggac
tgggaccagctccaggaccaggtccaggacctggccctggagctggacggctccgccgtg
ctgcaccgcctggacccgcgctacctgtccgtcaccgtggacgccagcctggccgcccag
gagaagttcatgctgctgctcaggtctgagaagatccggactctggccagagctttgagt
ccggcgttcctgcggttcggggggaccagacaggacttcatggtgttcacgcctgagaag
gagctgcagctggatccagatgtttctggaggcctcgcagggccgtgcgtgtcgtgtcca
gggccgtgcgtggacgcccggctgccctggtggtgggaggagaggctgaaggccgactgg
acccggcagcagcaggttctggtccgggaggacctgcagaggaagtaccggaggatcggg
ttctcagagctcaccgtggacatgctgcactccttcagcagctgctccgggctggacctg
atcttcggcctcaacgcgctgctccggaccgccgacaacagctggaacagcagcaacgcc
gacatgctgctgcggtactgccaggccaggcgctaccggctggactgggagctgggcaac
gagcccaacagctttgagaagaaggccgggatccgggtggacgggtatcagctgggactg
gacttcactcatctcagaaagatgatgtcagagtccgagctttaccgggatgcagggctg
tacgggccggacgtgggccagccgcgggaccaccgggccgacatcctggagggcttcctg
cagagcggcgctgacgccgtggacgccttgacctggcatcattactatgtgaacgggaga
gacacctctctggaggatttcctggatcctgaagtcctggacactctggccttgaagacc
aatgaagtcatggagagggtgaaggaagcgtctcctgggaaggcggtgtggctcggagag
accagttcagcttacgggggaggagcgcttggactgtctgacacgtttgtcgccggattc
atgtggatggataaactgggtcttgccgccagactgggcctgggtgtggtgatgcggcag
gtgctgctcggttctgggagttaccacctggtggacgagaacctggaccctcttcctgat
tactggctgtctgttctgcacaagaagctggttgggccggaggttctgaaagctcaggcg
gtttctggtgttggccgaagtaaacgagtgagagtgtacctgcactgcgctagcaagacc
agctacggaggcggagccgtggtgttgttggccatgaacatgagcaagaagccggcaagg
atctccgttcccgccctggtgtccaacagcacagtggacgcttttgtcctgcagtcggag
cagcgcggggaggagggactgctgtccaggtctgtgcaactgaacggacgactgctgaag
atggtggatgataaaaccctgccccccctgacgggagagcatctacctgcagaagatcac
ctgcagcttcctgcatactctctggcgttcttcgtctttgtggatgccggggtggcagcc
tgccactga
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