Cololabis saira (Pacific saury): 133454892 Help Entry 133454892         CDS       T09849                                  Symbol dcc Name (RefSeq) netrin receptor DCC isoform X1   KO K06765   deleted in colorectal carcinoma Organism csai  Cololabis saira (Pacific saury) Pathway csai04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:csai00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     133454892 (dcc)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:csai04515]     133454892 (dcc) Cell adhesion molecules [BR:csai04515]  Immunoglobulin superfamily   DCC/UNC5 family    133454892 (dcc) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Ig_3 Neogenin_C I-set ig Ig_2 Pur_ac_phosph_N V-set FN3_DSCAM-DSCAML_C Ig_Rha78A_N C2-set_2 fn3_SORL1 Interfer-bind Fn3_VIN3 C2-set_3 Ig_5 Ig_4 V-set_CD47 Motif Other DBs NCBI-GeneID:  133454892 NCBI-ProteinID:  XP_061589592 LinkDB All DBs Position 11:2106814..2190050 Genome browser AA seq 1550 aa AA seqDB search MWPAEASRWPGRRRRVGPLVAVLWMMLMLETGSSPAGFVDFAFTTEPEDTVTVRGGVLRL DCQARADTAPWPAAIAWRKDGAALSAEADERRTQLGNGTLLVRNVVQSRHQRPDEGEYQC VATLDGLGSIVSRRATVTVAGPLRVVSPTESVSSRLGDTALLLCRVDGDPNPTIRWQKNR QDLDLNPDPSDLNPDLDLDLDPDRVRLAVLPSGSLQISRVQPPDAATYRCLADNPGSTRT GADAELRVLPEPGVTRNLQFLQFPTRVSALLGTDAVLECSASGFPTAQIQWRRGGEEVHS WNKKYSLLAGSNLVIRSVTDDDSGSYTCTAANDNHNISASAELHVLVPPQFLSYPTNTLA AAAADVELECSVTGSPAPSVRWLKDGDEVVPSDYFRLVEGSSLQILGLLQSDQGFYQCVA ENEAGSSAATAQLMLREPEATPPGPDPAPLTDSSSSSPPPAWPRPPGSPRPPSAPRSPAP AAVSARAVRLSWLRPLEAGGGGVSTYGVFYREEGVARERCINVSDPSVHELTVSQLKPEQ IYVFRVVAFGEGGPGDSSAPVKITTKPDLQAPGRAESLRGSALSSTSIQVTWEAPANQNG PLLGYRLLWREEGQSGEEQSAEVGGTSYKMDGLSKFTAYSVRVRAANRYGLGPASEPVVV TTHSDVPSAAPQNVSLDVVLSRSIRVSWIPPPRNSQNGLITAYKIKYKKAGRRGDQEAIE PNNLWYLITGLEKGSRYSFQVSAMTVNGTGPASDWTEAETPENDLDESQVPDQPSSLHVR PLPRSIVMSWTPPLRPGVLVRGYIIGYGVGSPYADTVRVDGKQRYYAIEKLEPSSHYVIS LKAFNNAGEGVPLYESAVTRSLADPGDPLLDSDLFHLFDSAPSPPPDSAPMIPPVGVLAA ALSSDSVRVSWADNSGGKIPKMAAKMAAADTPRFYSVKWRSSFSPGGKYKSADTTALSHT VTGLKPNAMYEFAVMVTKGRRSSTWSMTAHASTYEAAPGSAPKDLTVIGREGRPRAVLVS WQPPAEANGRVTSYVLYYTREQAPPPDKAPPPDKAPPLDGWTTAVVGGDRLTHQLTDLSI DAGYWFRIQAKNAKGAGPLSEPAHFRTARADHPDKMANDQGRGGENGYWPSDSDAVDRSS INDPAQMRPPPHGSVTPQRGRSNMLVVVVVSVGGVTAVVTVIVALICTRHSSAQQRKKRA SSGGGASKRRGSQKELRPPDLWIHHEEMLEMKPAGGHAPSLGGHAPPGRGPTPSVAHSQS EGQMAAKGAELGQEEEVGGASTLERGGAGRSRKGRGLKMMIPLEPPPKNTPVVSAIPVPA LDILPSPSCGFSRGKFSLRPMPFPSLTVDRYAPALSSDVSSSSNPLLQPPPPAGSSAPAA GLPGSSCPAVELLPGPLVGAVPGVSVAAALEVPGGAGAAAGAVPAPEEPSAGLGSSSARI IPTACVRPSHPLRSFTSPLLPPPVMGEYGSSLPKPTAKTASLGQAGKARSPLLPVSVPTA PELTELTEEAGLKTGEDSATNIYEQDDLSEQMASLEGLMKQLNAITGSAF NT seq 4653 nt NT seq  +upstreamnt  +downstreamnt atgtggccggctgaggcgtcgcgatggccgggcaggaggcggcgggtcggcccgctggtc gcggttctctggatgatgctgatgctggaaactggttcgtcccccgccgggttcgtggac ttcgccttcaccacggagccggaggacacggtgacggtgcgcggcggcgtcttgcggctg gactgccaggcgcgggcggacacggcaccgtggccggccgccatcgcctggcgcaaggac ggcgcggcgctgagcgccgaggcggacgagcggcggacacagctcggcaacgggacgctg ctggtgcgaaacgtggtgcagtcgcggcaccagcggcccgacgagggcgagtaccagtgc gtggccacgctggacgggctcggcagcatcgtgagccgcagggccaccgtcaccgtggct ggccccctgagggtcgtctcccccaccgagtccgtctcctcccgtctgggcgacacggcc ctgctgctctgccgggtggacggagacccgaacccgaccatccgctggcagaagaaccgg caggacctggacctgaacccggacccgtcggacctgaaccccgacctggacctggacctg gacccggaccgggtccgcctggccgtactcccctccggttccctccagatcagccgggtc cagccgcccgacgccgccacgtaccgctgcctggccgacaacccggggagcactaggacc ggggcggacgccgagctgcgggtgctgccagagcccggcgttaccaggaacctgcagttc ctccagttccccaccagggtttctgctctgctcggaaccgacgccgttctggaatgttcc gcctcgggattccccacggcccagatccagtggaggagagggggggaggaagtacacagc tggaacaagaagtactctctactggccggcagtaacctggtgatccgcagcgtcaccgac gacgactccggcagctacacctgcacggcggctaacgacaaccacaacatcagcgctagc gccgagctacacgtgctagttcccccccagttcctgagctaccccaccaacacgttagcc gccgccgccgccgacgttgagctggaatgttcggtgacgggaagccccgccccctccgta cgctggttaaaggacggagacgaagtggttcctagcgactatttcagattagtggaagga agcagcctccagatcctcggcctcctccaatcagatcaaggcttctatcagtgcgtagcg gagaacgaggcaggaagtagcgccgctacggcgcagctaatgctgcgggagccagaggcc acgccccctgggcccgaccccgcccccctgactgactcctcctcctcctctcccccccca gcttggccccgccccccgggctcgccccgccccccctccgccccccgaagccccgccccc gccgccgtgtccgcccgcgccgtcaggctgagctggctccgccccctggaggccggaggg ggcggagtctccacgtacggcgtgttctacagagaggagggcgtggccagggagcgctgc atcaacgtgtccgacccgtccgtccacgagctaacggtgtcgcagctgaagccggagcag atctacgtgttcagggtggtggcgtttggggaggggggccccggggacagctcggccccc gtaaagatcaccaccaaaccagacctgcaggcccccggcagggcggagtctctccgaggc tccgccctctcctccacctccatccaggtcacatgggaggccccggccaatcagaacggg ccgctgctgggctaccgcctcctgtggagggaggagggccaatcaggagaggagcagagc gcggaagtgggcgggactagctacaagatggacggcctcagcaagttcaccgcgtacagc gtacgcgtccgcgccgctaaccgctacggattgggcccggcgtccgagcccgtcgtcgtc accacgcactcggacgttcctagcgctgctccgcagaacgtctccttagacgtggttctg tcccggagcatcagggtgtcgtggattccccccccgaggaacagccagaacggcctcatc accgcctacaagatcaagtacaagaaagccggtcgccgcggcgaccaggaggccattgag cccaacaacctgtggtacctgatcaccggtctggagaagggcagccgttacagcttccag gtgtcggccatgacggtcaacggaaccggaccggccagtgattggacggaagcagagact ccggagaacgacctggacgagagccaggtcccggaccagccctcgtccctccacgtgagg cccctcccccgcagcatcgtgatgtcgtggactccgcccctccggcccggcgtgctcgtc cgcggctacatcatcggctacggcgtcgggagtccgtacgccgacacggtgcgagtcgac ggcaagcagcgctactacgccatcgagaagctagagcccagctcccactacgtcatctcc ctaaaggctttcaacaacgcgggggagggagttccgctgtacgagagcgctgtgacgcgc tcgctagccgaccccggtgaccccctgctggactcggacctgttccacctgtttgactcc gccccctcacccccgcccgactccgcccccatgatcccgcccgtgggcgtgctagcggcg gcgctaagctcagactccgtccgcgtctcctgggccgacaactcgggcgggaagattccc aagatggccgccaagatggccgccgccgacacgccgcgcttctactccgtcaagtggcgg agcagcttctcgcccggcggcaagtacaagtcggccgacacgacggcgctcagtcacacc gtcaccgggctcaaacccaacgccatgtacgagttcgccgtcatggtgaccaaaggtcgc aggtccagcacgtggagcatgacggcgcacgctagcacctacgaagcagcgcccggctcg gcccccaaggacctgacggtgatcgggcgcgagggtcgtccgcgggccgtcctcgttagc tggcagccgccggcggaggctaacggccgcgtcaccagctacgtgctgtactacacgcgg gaacaggccccgcccccggacaaggccccgcccccggacaaggccccgcccctggacggc tggacgacggcggtcgtcgggggcgaccggctaacgcaccagctaaccgacctgagcatc gacgccggctactggttccgtatccaggccaagaacgccaagggggcggggcctctgtcg gagcccgcccacttccgcacggccagagcggatcatccagacaagatggccaacgatcaa ggtcgtggaggagagaacggctactggccgtcggacagcgacgcggtggaccggagtagc atcaacgaccccgcccagatgcgcccccctccccacggcagcgtgaccccccagaggggg cggagcaacatgctggtggtcgtcgtggtgtcggtgggcggagtcaccgccgtcgtcacg gtgatcgtcgccctgatctgcacccgacactcctccgcccagcagaggaagaagcgcgcc agcagcggcggcggcgctagcaagcggcgcggcagccagaaggagctccgcccccccgac ctgtggatccaccacgaggaaatgctggagatgaagccggcgggaggccacgccccctcg ctgggaggccacgcccccccggggcgaggccccaccccctcggtggcccacagccaatcc gagggccagatggccgccaagggggcggagttagggcaggaggaggaggtgggcggggcc tccacactggagcgagggggggcggggcggagccggaaggggcggggcctaaagatgatg atcccgctggagccgccgcccaaaaacacaccggtggttagcgccatcccggtgccggcg ctggacatcctgccgtcgccgtcctgcggcttcagccgcggcaagttcagcctgaggccg atgcccttcccgagcctgacggtggaccgctacgcaccagccttgtcctcggacgtctcc agcagcagcaacccgctcctccagccgcctccgccggccggttcctccgctccggccgca gggcttcccggttcctcctgcccggccgtggagctccttcccgggccgttggtcggcgcc gtcccgggggtctccgtggcggccgctctggaggtcccggggggcgccggggccgccgcg ggggccgtccccgccccagaggagccctcggcggggttagggagctcctccgcccgcatc atccccacggcctgcgtgcggccctcgcacccgctgcggagcttcaccagcccgctgctg ccgccgcccgtgatgggcgagtacggttcgagtctcccgaagccgacggctaagacggcg tcgctcggccaggcgggaaaagctcgctcgccgctgctgcccgtctccgtgccgacggcg ccggagctaacggagctaacggaggaggcggggcttaagacgggcgaggactcggctacc aacatctacgagcaggacgacctctcggagcagatggctagcctggaggggctaatgaag caactcaacgccatcaccggctctgccttctaa

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