Cololabis saira (Pacific saury): 133454929
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Entry
133454929 CDS
T09849
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133454929 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133454929 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
csai04091
]
133454929 (lman1)
Membrane trafficking [BR:
csai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
133454929 (lman1)
Lectins [BR:
csai04091
]
L-type lectins
133454929 (lman1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
GCN5L1
FidL_like
Motif
Other DBs
NCBI-GeneID:
133454929
NCBI-ProteinID:
XP_061589652
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Position
11:complement(9187248..9214088)
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AA seq
518 aa
AA seq
DB search
MAVSVARRPAAAANAAVLLLSFLSTLMFRGGVADVAVNGSGSEQPPHRRFEYKYSFKGPH
LAQTDGSIPFWIHTGNAIPSTDQVRITPSLRSQRGTVWTKNRVDFEHWEAEVTFRVSGRG
RMGADGLAVWFTTSQGLDGPVYGAADQWNGIGIFFDSFDNDGKKNNPAIIVVGNNGNLVY
DHQNDGTTQALGTCLRDFRNKPYPVRAKITYYKKTMTIMINNGFTPDKEDYEFCTKVDNM
VIPSEGFFGISAATGGLADDHDVLSFLLFRLTEPGQQTPPVESEIPKEEKDKYQEEFQNF
QQELDKKKEEYQKEHPNVQGEPIDDVYESVNDREIRQVFEGQNRIHLEIKQLHRQLAMIL
DEQRRYVSVITDEISKKGANTGSGQLESSGQQLGSVVATQQEVLRNLNELRNSFYESLKQ
IGSAQHQGNAGGIGTYETIQHFNDIKEHLHLVKRDMEHLVQRNAQNPADKVVKCPEMPPM
PSCLSTIHFAIFVVIQSVLFFCYVMYKSQQEAAAKKFF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccgtagcgcggcgcccggcggcggcagcaaacgctgcggtgttgctgtta
agtttcctctcaacgttaatgtttcggggcggcgtggccgacgtggccgtgaacggctcg
ggctccgagcagcctccgcaccgccggttcgagtacaaatacagcttcaaggggccgcac
ttggctcagactgacggcagcatcccgttctggatccacactggcaatgctattcccagt
acagatcaggtgcgcattacaccgtccctcaggagtcagagggggactgtgtggacgaag
aacagagtcgactttgagcactgggaggcggaggtgaccttcagggtatctggaagaggc
agaatgggagcagatggcttggcggtatggttcaccacctcccaaggcctcgacggtccc
gtgtacggtgcagcggatcagtggaacgggatcggaatcttctttgactcctttgacaac
gatggaaagaaaaataacccagctataattgttgtggggaacaatggcaaccttgtttat
gaccaccaaaacgacggcaccacacaagccctcggtacatgtttacgagacttccgcaac
aaaccctatcccgtcagggccaaaataacatactacaaaaagactatgacgataatgatc
aacaacggtttcactccggacaaagaggactatgaattctgcacaaaggtggacaacatg
gtcattcctagcgaaggcttctttggcatttccgccgccaccggtggtttagctgatgac
catgatgttttgtccttcttgttattcagactaacagaacctggccagcaaacgccccca
gttgaatctgagattcctaaagaagagaaggacaagtaccaggaggaatttcagaacttc
cagcaagagctcgataaaaagaaagaagagtatcagaaagagcacccgaacgtccaagga
gaaccaattgatgatgtgtatgaaagcgtgaatgaccgggagatccgtcaggtgtttgaa
ggccagaaccggatccacctggagataaaacagctccaccggcagctggctatgatcctg
gacgagcagcgccgatatgtctccgtcatcacggacgagatttctaagaagggtgcaaat
acaggatcgggacagctggagtcctctggtcagcagctgggctccgtcgtagccacacag
caggaggttctcagaaacctgaacgagctgagaaactccttttacgagtcactgaagcag
attggctcagcccagcatcaaggtaatgcaggcgggattggaacgtatgaaactattcag
cacttcaacgacatcaaggaacacctgcaccttgtgaagagggacatggagcacctggtc
cagcgcaatgctcagaatcctgctgataaggttgtgaagtgcccagagatgccccctatg
ccctcctgtttatccactattcattttgcaatatttgtcgtcatccagtccgtcctgttc
ttctgctacgtcatgtacaaaagtcaacaagaagcagcagcaaagaagttcttttga
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