Cololabis saira (Pacific saury): 133454935
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Entry
133454935 CDS
T09849
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
csai01100
Metabolic pathways
Module
csai_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
133454935 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133454935 (csgalnact1a)
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
133454935 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
133454935 (csgalnact1a)
Glycosyltransferases [BR:
csai01003
]
Glycan extension
O-Glycan
133454935 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Motif
Other DBs
NCBI-GeneID:
133454935
NCBI-ProteinID:
XP_061589659
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Position
11:complement(9767833..9830334)
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AA seq
596 aa
AA seq
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MLHAVMLRRGLLTWVSRVGGILVFLCCSLSLLYVMTCSPPHSDDLLLSRVLPHPGSNHPK
LGGTGPVIGAAAGGTGGASAAAAAQSGGPPGVGNYQALLQEREEQHRLYISSLKKQIAQL
KEDLQERSQQLKSVQESLKRATGPGGPVEGQERGTESHGAGLGEVQGSKSQQSDLQDFLK
GQLSKAEVTAGTRLPSEYAVVPFESFTLQKVFQLEMGLTRHPEEKPVRKDKRDELAEVLE
MALRSLNTPSSQQDGQGAAEKTETRKIYAPSDFIEGIARTEKDKGTLYQLTFRGDASNEF
KRLVLFRPFGPLMKVKHERVDTANVPINIVVPLSGRTDKFKQFMHNFREVCVRQDGRVHL
TVVYFGKEQMSEVRSTLENTSRELNFKNYTLLQIDEEFSRGRGLDVGARAWKGGNVLLFF
CDVDIYFTADFLNTCRLNTQAGKKVFYPVLFSQYNPTLIYGGPDHIPPVEQQLVIKKDTG
FWRDFGFGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLW
HAKHCADELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKQQQSPKKT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgcagtgatgttgcgacgtggactgctaacctgggtgtcccgcgtcgggggc
atcctggttttcctctgctgctccctgtccctcctctacgtgatgacgtgcagcccgccg
cactctgacgaccttctgctgagtcgtgttttgccccatcctggatccaaccaccccaaa
ctaggaggtacggggccggtgatcggtgcggcggccggtgggacgggaggagccagtgcc
gccgccgctgcccaaagcggtggtccgccgggagtcggcaattaccaggcgctcctgcaa
gagcgcgaggagcagcaccgcctctacatctcctcgttgaagaagcagatagctcagctg
aaagaggacttgcaggagcgcagccagcagctgaaaagcgtgcaggagagcctgaaaaga
gccacggggccgggggggccggtggaggggcaggaacggggcacggaatcacacggagcg
ggactcggagaagtgcaagggtccaagagccagcaatctgacctccaggacttcctgaag
ggtcaactgtcgaaggccgaagtgacggccggcaccaggttgccgagcgaatacgccgtg
gtgccctttgagagcttcaccttgcaaaaggtgttccaactggagatggggctcacgcgg
catcctgaggagaagcctgtgaggaaggacaagagagatgagttggcagaggtgctggaa
atggccttgcgcagcctgaacacgccctcgtcccagcaggacggccagggtgcagcagag
aagactgaaacaagaaagatctatgcgccgtcggacttcatagaaggtatcgctcgcaca
gagaaagacaaaggaacgctgtaccagctaacgttcagaggggatgcaagcaatgaattc
aagcggcttgtgctcttccggcccttcggacccctgatgaaggtgaagcacgagagggtg
gacacggccaacgtccccatcaacatcgtcgtcccgctgtctggacgcacggacaagttc
aagcagttcatgcacaacttcagggaagtgtgcgtgcgtcaggacggccgggtgcatctg
actgtggtgtattttgggaaggagcagatgagcgaagtccgcagcactctggagaacacg
tccagggagctgaattttaagaactacaccttgctgcagatagatgaggagttttctcga
ggacggggtctggacgtcggggcccgggcttggaagggaggcaacgtgctgctttttttc
tgcgacgttgacatctacttcacggccgacttcctgaacacctgccgactcaacacacag
gctggaaagaaggtgttctaccccgtgttattcagccagtacaaccccacgctgatctac
ggcggtcctgatcacatcccacctgtggagcaacagctggtgatcaaaaaagacacaggc
ttctggagagatttcggctttggcatgacttgccagtacagatccgacttcatcaacatt
gggggctttgacatcgatatcaaaggctggggtggcgaagacgtccacctctacaggaag
tacctccacagcaacctgctggtcgtccgcgccccgtcacgcggcctgttccacctgtgg
cacgccaagcactgcgccgacgagctccctccagaccagtaccgcatgtgcatgcagtcc
aaggccatgaacgaggcctcgcacggccagctggggatgctcttcttcagacacgagatt
gaagctcacctccgcaaacagaaacaacagcaaagccccaagaagacatga
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