Cololabis saira (Pacific saury): 133454968
Help
Entry
133454968 CDS
T09849
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133454968 (sec16a)
Membrane trafficking [BR:
csai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133454968 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
133454968
NCBI-ProteinID:
XP_061589713
LinkDB
All DBs
Position
11:complement(12058119..12089088)
Genome browser
AA seq
2364 aa
AA seq
DB search
MQPPPRTGPPGASGPPPAGPNMFRRPKAQKYPAATAAAAATPTPTMPPPTQPMTDPFAFS
RTPPPLAAGGLPAVPNENLPQMQAPPNAMYPHPGSGLPPQPQTLENVPAALPGLPPSSLP
GVALFNPHNVASPGVFPMQSHPGGYAPSNREQGYFNSRDQTPSASMESPAMATAATPGQT
HFNQDFQGQPPPHHPIPFQPLPPSASSQWAPDHTSRPPSVQNYFQPTSDLPPQPLNPDPQ
LQMYPSHSQSPHNNAPTHATQPGHVQNPNPVTSPNDQWQDPNRPQHHNSHFQTQSYFSQS
SAPQESWFNQPPQDSCYHQMGTGFGHPQPLTDSAGPGSVPGPGPGPGPGPASAPTTDPDY
QESGTLSMFFKDSGVENEESLAGERNKSVNGVPGSFQHHGNPQAHSSHVDLSLDYQEAPP
QDLSQLPYMNDGSHPSPASTQKPLDTQFDHEENLECVPNQEVLPSETLSNPAAIAPHGID
LFETGPNLETPDSIPRPVRSASVSSNYSNMSHGSGTGTRRHQGVKGTFIQQESPRLTEDP
SLSGATGGYFEQIDTSPAGDTSVQPSPVEQMWLPTPSPPKPTGIFQASANSSFEPVRSHS
VGVRPAEVDKAKMVVEGRTDGTAGNLEQPPDNMENIYGSGHLPPATAGSGAPHLTHPGIP
SHSRPSSRAFGASRPCESPATTLWAQNDPASLGANILLAPAAPAVLPPLREPSADVIQPP
EDGPLDLQPAQRIQPVSQPHSENLENPPKVSDAEPADSQGNLGYASLLVSGSLHQPVLIA
PPVSNYSVIPPATPAQSSFQSSHMETTQPENSITQGQGASISQPPTDQNPLLSPAPITLY
SSTSNQGPLNLTRNNTIDSTSEIQSGPQSQPIHPPLTRGQSSSGNVHSAVQVNSQPSSLM
TPLVSNHNLSSNFELLDFSMHQSHPPSQAPGPPSSLHEPSQSSNGFYLQVTNDAQQRSRV
EGNTSTQTPASSSTPQIPPAASQAAANTQNTSSEPPMTTESHASLQGQKAAPSVPVSEAQ
PSSAPVQGPAGGRTPVPDPAYPPGPQGSLPPGASQPAPTEPARPPSSAGSHHGYGPPPAT
PGQAYSGYYGNYGEYQDGRAMYPPGQYPPPPGDPRTQPYYQEGPYRGRADPWYGRYEGQT
PGYRDPNYQYREPQPDRPSSRTSQYSDRPSSRQGYPEDNHRANRSAYNEYYADYPKHYDY
GAYNYGQYDPRYRGYYDQSYWSYYDEAYKSSYYNQQAYPARKEGYEDQWRYYPGYDSSFD
EENRRSRDAYGDDFDRRSIHSEQSAHSVHSSHSHHSRRSSFSSRSQQSQVYRSQPDLVSA
VYDASQSTLAADYSYGQYPNQTDASQNYSQYIYPSDYTADSTWIAPEQPPPRPATPEKFT
MPHRCARFGPGGHLVQILPNLPSAGQPALVDIHNMETMLQDTSDQGELRTFPGPLIKEET
HKVDVIKFSQNKALECARDNNLLDRDSSRLLWDFIVLLCRQNGTVVGTDIADLLLKEHRS
VWLPGKSPNEANLIDFNNEPLARAEDEPGAGPISLLSDTFMVVPENVGRETERFRELLLF
GHKKDALEAAMKAGLWGHALLLASKMDNRTHARVMTRFANSLPMNDPLQTIYQLMSGRMP
ASATCCGEEKWGDWRPHLAMVLSNLTHTLDLDTRTITTMGDTLASKGLTDAAHFCYLMAQ
IGLGIFTKKSTKMVLIGSNHSFSFRQFATNEAIQRTEAYEYAQSLGSKTCSLPNFQVFKL
IYACRLAEAGLCAQAFHYCEVISKTVLTQPSYYSPVLISQIIQMSEKLRFFDPQLKEKPD
EGLFIEPEWLIQLRQLDGQIKTGVITFSMARRTPTQFDCSSESSDLDQQTPPEPYSMQLE
VDGPAPDNPLMSSLLPGPPPQAVQLMPPAPTSILQDGMAPPHLLPSGDVPHFYPVPPSGP
QGQIPNPGYPQQDHAFVPPSFQPQSEQSEMYPGAHQQPCPPPQVGQMTPHMLPSQMPHSP
VQMNPPPFQMQQHMPPSPGHMPRMEQPAQPFLDMHTGQTISSSPPRGSFTPQMDLYDHLA
STVPGRTRTTSQSSMHMASGRSSRRASESSTHSGGRERSNSAVKQSSPPPPSIPEQPRKE
EAKKAKKDSPKKSRGLLGWFFGKGKNEAHLPDDKNPSIVWDEQKQKWVDLNEPEEERQPP
PPPPSGFPKMPQMPGPGGPGGPAAPPNSGPPVNMFSRKAGTRSRYVDVLNPSSTAKPSGL
APAPTDIFAPLAPMPMPANLFVPTSAPDDHQPLEGSEGGNHEQNSPNINAAAQMFNPTLL
PPASEGPPIPDNSQSGELSRSSSMSSLSREVSQHLNQSHPPQGAPPAGGVTFYNPAQFVQ
PSAPSGGGLRSGRLGGQRQYPVLK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctccacggacgggacctccaggagcctctggccctcctcctgctgggcct
aatatgttccgtaggcccaaggctcagaagtatccagcagcaacagcagcagcagcagca
acacccacacccacaatgcctcctccaacccagcccatgacagatccatttgctttcagt
agaactcctcccccgttggctgcaggtggtctgccagcagtaccgaacgaaaaccttcca
caaatgcaagcccctcccaatgccatgtatcctcatcctggatcaggactacctccacag
ccacagacactggagaatgttccagctgcgctacctggtcttccaccatcgtctctgcca
ggggtggcccttttcaacccccacaacgtagcctcccctggtgttttcccaatgcaaagt
catccaggtggttatgcaccctcaaatagggaacaggggtattttaattcaagagatcaa
acaccatctgcgtcaatggagtcaccagctatggctacagccgcaacacctggtcagaca
cattttaaccaggattttcaaggacagcctcctcctcatcatcctatcccctttcagcct
ctgcctccttccgcttcttctcagtgggcccctgatcatacaagtcgccctccttcggtt
caaaactatttccagcctactagtgatcttccaccgcagcctttaaatccagatccacag
cttcaaatgtacccctctcacagtcagtcaccccataacaatgcccccacccatgcaaca
caacctggacatgtccagaatccaaaccctgtaacgtctcctaatgatcagtggcaagac
ccaaatagaccccaacaccacaactctcatttccaaactcagagttatttcagtcagagc
tctgccccccaagagtcatggttcaatcaacctccacaggactcatgctaccaccaaatg
ggaactggctttggccatcctcagcctctgactgattctgctggacctggatctgtgcct
gggccagggcctggacctgggcctgggcctgcctctgcccctactacagatccagactac
caggagtctggtacactctcaatgtttttcaaagacagtggtgtggaaaatgaggaatca
cttgctggagagagaaataagtcagtaaatggcgttcctggatcttttcagcatcacggg
aacccacaggcccacagtagccatgtggatctttcattggattaccaagaagcccctcct
caagatctttcacagctaccgtatatgaatgatggcagtcatccgtcacctgcaagtacc
caaaagcctctggatacccagttcgaccatgaagagaatttggaatgcgtcccaaaccag
gaagtattacccagtgaaaccctcagcaatccagctgctattgcaccacatggaatagac
ctgtttgaaaccgggcccaacctggaaactccagattcaattccaagacctgtgagatcc
gcaagtgtgtcatccaactacagcaacatgagccatggaagtggaactggcactcgtagg
caccagggagtcaaaggcacttttattcagcaggaaagcccacgtctcactgaagatcct
agcctgtctggtgctactggaggctactttgagcagattgatacttctccagcgggagat
acaagtgtgcaaccgagccccgtagagcagatgtggcttcccacaccaagtcctcccaaa
ccaactgggatttttcaagctagtgctaacagctctttcgaaccggtgcgttcacatagt
gttggtgtgcgtcctgctgaggttgataaggctaaaatggtagtagaagggcgaaccgat
ggcacagctggaaatttagagcaaccaccagataatatggaaaatatctacggctcaggg
cacctcccgcccgctactgctggaagtggagcacctcatctcacacacccaggtattcct
tctcattctcggccttcatcccgtgcatttggggccagtcggccttgtgagagccctgcc
actactctgtgggctcagaatgaccctgcgagcttgggtgctaacatcctccttgctcct
gctgctccagcagttttgccccccttacgagaacctagtgctgatgtcatccagcctccg
gaagatggcccattggacctgcagcccgcccaaagaatccagccggtttctcagccacac
tcagaaaacctagagaacccgccaaaggtgagtgacgcagagccggctgactctcaaggc
aacctgggctacgcgtctctccttgtatccggctcgctccatcagcctgttttaattgcc
ccgcctgtatccaattacagtgtgattcctcccgctactcctgctcagtcgtcctttcag
agtagtcacatggaaactacacaacctgaaaactccattacacagggacagggcgccagt
atctcccaaccacctactgatcaaaatccactcctgtctcctgcaccgattactttgtat
tcttccacctcaaatcagggaccgcttaatctgacacgaaataataccatagattcaaca
tcagaaatccagtctgggccgcagtctcaaccaatccatcctcctcttacaaggggccaa
tcatcaagtggaaatgtccactctgctgtccaagttaattcacaaccttcttctctcatg
actcctcttgtctccaatcataatctatcatcaaattttgaactgcttgatttttctatg
catcaatcgcaccctccaagccaagcgcctggcccgccttcttctcttcatgaaccttca
cagtctagtaatggattttacctgcaggtcaccaatgatgcacagcagcggtcacgtgtg
gaagggaatacttccacccaaaccccagcctcttcatccaccccacaaattccaccagca
gcctcccaagcagctgcaaacacccagaacacttcaagtgaacctcctatgacaacagag
tctcacgcttctctgcagggacaaaaagctgctccttctgttcctgtgagtgaagcacaa
ccttcttcagctccagtgcaggggcccgctggagggaggacccctgttcctgatcccgca
taccctccagggccacaaggctcattgcctccaggggcttcccagccagctccaacagag
cctgctcgaccaccttcctctgcaggcagccatcatggttatggacctcctcctgccaca
ccaggccaggcttacagtggatattatggcaattatggagaataccaagatggcagagca
atgtatcctcctggccaatacccacctccacctggggatccaagaacacagccatattat
caagagggtccgtatcggggcagagcagatccttggtatggcagatatgaggggcagact
ccaggttaccgtgatccaaactaccagtacagggagcctcaacctgatcggcccagttca
aggaccagccagtactccgacagaccctcgtcaagacaaggctatcctgaagataaccac
cgtgcaaaccggagtgcctataatgaatattatgcagactatccaaagcactatgattat
ggagcatacaactatggacaatatgacccccgatacagaggatactatgatcagtcctac
tggtcttattacgatgaagcgtacaaaagcagctactataatcaacaagcgtatcctgcc
aggaaagaaggctatgaggaccagtggcggtactatcctggttacgattccagtttcgat
gaggaaaaccgccgtagtagagacgcgtatggtgatgactttgaccgacgcagcatccac
agtgaacagtcggcacacagtgtgcacagctcccacagtcaccacagcagacggagcagc
ttcagctcacgatcacaacagagccaggtgtacaggagccagcctgacttggtgtctgca
gtttatgacgcttcacagtctactctggctgcagactattcctatgggcagtatccaaat
cagaccgatgcctcgcagaactacagccagtacatctatccctcagattatactgcggac
agcacgtggatcgctcctgagcaacctccccctcgtcctgcaactccagagaagttcaca
atgccccaccgctgtgcccgttttggacctggtggtcatctggttcagattctgcctaat
ctcccctcagctggacagccagctctggttgatattcacaacatggagacgatgctccag
gatacctccgatcagggtgaactacgaactttccctggccctcttataaaggaggaaacc
cataaggtggatgtgataaaattctcccagaacaaagcactggagtgtgcccgtgacaac
aacctcttggacagagactcttcccgcctgctctgggacttcattgtactgctgtgtaga
cagaacgggacggttgtcggcacagacatcgcggatctcttactgaaggagcatcgctca
gtgtggctaccgggcaaaagtcccaatgaagcaaacttgattgattttaataacgaaccc
ctggcacgagctgaggacgagccaggggctgggccgatatcgcttctgtcggacactttt
atggtcgttccagaaaatgttggcagggaaaccgaacgcttcagggaactgctgctattt
ggccacaaaaaagatgcactagaagcagccatgaaggcaggtctctggggtcatgccctg
ctgttggctagtaagatggacaacaggactcacgcacgtgtcatgacgaggtttgccaat
agtttgcccatgaatgatcctctccagacaatataccaactgatgtcaggaagaatgcct
gcatcagccacttgctgtggagaggagaagtggggtgactggcgtcctcaccttgccatg
gtgctatcaaacctaacgcacaccctagatctggacactcgcaccatcaccaccatgggt
gacactcttgcttctaagggattgactgatgctgctcatttctgctaccttatggcccaa
attggtctgggaattttcacaaagaaaagcaccaagatggtcttgattggctccaatcac
agtttttcctttagacagtttgccaccaatgaagcaatccagaggactgaggcgtatgag
tatgctcagtcgctcggttccaagacttgctcactgcctaatttccaggtgttcaagttg
atctatgcatgccgcctggctgaagcaggactgtgtgcccaggcctttcactactgtgaa
gtcatctccaagaccgtccttacacagccctcttactattctcctgtgttgatcagccag
atcattcagatgtcggaaaagttgcgattctttgatccacaactgaaggaaaagccagat
gaggggttgtttattgagcctgagtggttaattcagctcagacagctggatggacagatt
aagaccggtgtgatcacgttcagcatggcgagaagaactccgactcaatttgactgcagc
agtgaaagttctgacttggaccaacagactcctcctgaaccttacagcatgcagttggag
gtggatggcccagcccctgacaacccactcatgagctcattactgcctgggcctccacca
caagcagtgcagttgatgcctccagctcccacttccatcctccaagatgggatggctcct
cctcatctcttaccctccggtgatgttccccacttctacccagtaccccctagtggacca
caaggccagatccctaaccccggttaccctcagcaggatcatgcttttgtgcctccctcc
ttccagcctcaatctgagcagtcggagatgtatccaggagcccatcagcagccctgccct
cctcctcaagttggccaaatgacaccacacatgcttccttcacaaatgccacattcacct
gtgcagatgaaccctccaccatttcagatgcagcagcacatgccaccctctcctggtcat
atgccacggatggagcagccagcccagcctttcctagatatgcacactggtcaaacaata
tcatcctcccctcccaggggctctttcacacctcaaatggacttgtatgaccacttggca
agcacggtacctgggagaacacggactacttcacagtcttcaatgcatatggcatcagga
cgcagctctcgcagagcctctgagtcgtctacgcactccggtggaagagagcggagcaac
tctgctgtgaagcaatcctctcctcccccaccctcgattcctgaacaacctcgtaaagag
gaggccaagaaagcaaagaaggactccccaaaaaagagtcgtggcttgctggggtggttc
tttgggaaggggaagaatgaagctcacttgccagatgataaaaacccatccattgtgtgg
gatgaacagaagcagaaatgggttgacttgaacgagcctgaagaggagagacagccccct
cctccacctccctctggttttcccaagatgcctcagatgcctggtcctggtggccctggt
ggtccagctgctccaccaaacagcggacctccagtaaacatgttctccaggaaggcaggt
actaggagcagatatgttgatgttctgaacccgagttcaactgctaaaccaagcggattg
gcccctgctccaacagacatctttgctcctttggcaccaatgcccatgcctgctaatcta
tttgtgcctacttcagctcctgatgatcatcaacctctggagggcagtgaaggaggaaat
catgagcaaaattcaccaaacataaacgctgctgcgcagatgttcaacccaacgttgttg
ccccctgcttcagaaggtcctcctattcctgataactctcagtctggggagctttcacgt
tctagctcaatgagttctttatcacgcgaagtgagtcagcatttaaaccagagtcaccct
ccccagggagctccacccgctgggggcgtcaccttttataaccctgcacagtttgtacag
ccaagtgcaccatcaggaggtggactgcgctctggccggttgggaggacagcgccagtac
ccggtgttgaagtga
DBGET
integrated database retrieval system
