Cololabis saira (Pacific saury): 133454982
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Entry
133454982 CDS
T09849
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133454982 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133454982 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
133454982
NCBI-ProteinID:
XP_061589735
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Position
11:complement(12567105..12624360)
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AA seq
1219 aa
AA seq
DB search
MGNISWRSQVSSEDTDSSLQGDLDEDADSQRSHRSTFTIIMEKFHSPKIKRTPSKKGKPL
QPEPAAKSTEKPANKKVSRLEEHEKEVVNALRYFKTIVDKMVVEKKVLEMLPGSASKVLE
AILPLVQVETRIQHSSALTSCHSRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIK
AVLDGVKELVKLTIEKQEQPSPTTPNKPAPPVTTAESSVPSEMPSIDQEHEISNKTAPAP
SPAESAPELADEDVAPPKPPLPEAKMAELRAQLSADAGQRRPAQKENPPPALPPKKRQSA
PSPTPVAVVAPMTRGSSLPCSDHRQEYEQELLHRRFSGGSHSYGGDSPRLSPCSSMGKLS
KSDEQLSSMEQDSGQCSRNTSCETLDNTETYDPDYDFLHQDLSAGDNLPPITVGGCLSPL
PESHSESSSPVPGQHSPHPRFSAPPPQQPEYWTPQPTNTNPLQSSRISAPPALPEKKRRS
TQTSGLFPDVGSRVLYERYPSQYDNLSEEDLHPTPPFPLFTPISPMPQTNGGVFVSQYLA
SESADVPASPPPLPEKKSRHILQYMQFVEDYSEPQPSVFYQMPQSESIYEQRNKRFQEVC
GFNDSFSSTDSVHEPLQPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVTALEEAGSG
LGLSMSVSNSYLNGQASLTTPTSLDQVALTNATILDGSRGGPNGSLAGSVGSVAVCLPSG
SSLTDSLHTSASESANDEGGEGEYVNLYTSTQANGELPLSLRETIAADEVLQDPAPQIPS
SNSKEALDKERKAQKVTELPGSDKEDVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGD
ILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTTFCHSPDTFKKRVSKNT
FFVLVRVVDELCLVELTEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQKKLLRYT
NSLKPLSARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPN
LTQFTEHFNNMSYWVRSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDS
APIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLG
NPDLIEGKVNFSKRWQQFNILDSMRRFQQVHYELKRNEDIISFFNDFSDHLAEEALWELS
LKIKPRNIARRKTDREEKT
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacatcagctggaggagtcaggtgtcctcggaggacacagattcctctctacag
ggggatctagatgaggacgcagactcacaacggtcccatcggtccactttcaccataata
atggaaaagttccactctcccaagatcaagaggactccttccaagaaaggaaagcctctc
cagcccgagccggcagccaagagtactgagaaacctgctaacaagaaagttagccggcta
gaagagcatgagaaggaggtggtcaatgcactgcgctacttcaagacaatcgtggacaaa
atggtggtggagaagaaggtgctggagatgcttccaggctcagccagcaaggtgctcgaa
gcaattctgcccctggttcaagtagagacacggatacagcacagttcggcactgacttct
tgccatagccgcgtgtatcagagtctggccaaccttatccgctgggcagaccaggtgatg
ctggacggcattgacttagaggataaagagaatgtggcgtccgtcaccagtgtcatcaaa
gcagtgctggatggagtaaaggaactggtgaagctcaccatagaaaaacaagagcagcca
tcacccaccactcccaacaaaccagcaccgcctgttaccacggcagagagcagtgtgcca
tcggagatgccctcgatagatcaggagcatgagatatccaataagacggctccagcacct
tctcctgcagagtctgctcctgagttagcagatgaagatgtagcccctcccaaacccccc
cttcctgaagccaaaatggctgagctcagagcacagttgagtgctgacgctggccaaagg
agacccgctcagaaggagaacccaccgccagctcttccacctaagaagcgccagtcagcc
ccttcgcctacaccagtggccgtggtcgcaccgatgacccgtggttctagcttaccgtgc
agcgaccacagacaggagtacgagcaggagcttcttcaccggcgtttctctggggggagc
cattcttacggaggggactctcctcggctttccccctgcagcagcatggggaaactcagc
aaatctgacgagcagctttcttccatggagcaggacagtggtcagtgttcccgtaacact
agctgcgagaccctcgacaacacagagacttatgacccggattatgacttcttgcaccag
gacttgtctgctggggataaccttcctccaataacagtgggcggttgcctcagtcccttg
cctgagtctcacagcgagtcctcgtccccggttcccggacagcattcgccacatccccgc
ttcagcgcgcctccaccccaacagccagaatattggaccccccagcctactaacactaac
cctctacagtcttctcgcatcagcgctccccctgccctgccagaaaagaagcgccgcagc
actcagacatcaggtctttttccagatgtgggctccagggttctatatgagcgatacccc
tcccagtatgacaacctgtcggaagaagacctccaccctacaccaccatttccccttttc
acacccatttcacccatgccccagacaaatggaggagtgtttgtttctcaataccttgca
agtgagagtgcagatgtccctgccagcccaccacctctgccagaaaagaaaagcagacac
atccttcagtacatgcagttcgtggaggactactcagagccacagccttccgttttctac
cagatgccacagagtgaaagcatatacgaacagcgcaacaagcgtttccaggaggtctgt
ggcttcaatgactctttcagcagcaccgattcagttcatgagcccctgcagcccccagca
ctgccaccaaaacagagacaactggcctcccactcttcttccccttcttcttcctcctcc
tcttccctctcatgccacctccagccgtctgtaacggctctggaggaggcgggctctggg
ctgggcctcagcatgtccgtctctaactcctacctgaacggccaggcgtctttgaccaca
cccacgagcttggaccaggttgccttgaccaatgccaccattctggatggcagcaggggt
gggcccaacggttccctggccggctcagtgggttcagtggctgtatgtcttccttctggc
tcttctctcactgactctcttcacacctcagcgagcgagagcgcgaatgacgagggcggg
gagggagagtatgtcaacttgtacacgtcaacccaggccaatggggagctgcctctctcc
ctccgagaaacaattgcagctgatgaggtacttcaagaccccgccccccagatcccgtct
agtaatagcaaagaggctttggacaaggaaaggaaggcacaaaaagtaacagaactgccc
gggagcgacaaggaagatgtggacgaactctccctcatagaccacaaagagatcatgagc
agaataacactaaagcaagaaaatgacgatggccctgatgttcgtgccggatcaggagat
atcctattagtccacgctacggaaacagaccgcaaagatcttgttttgtactgtgaagcc
tttctgactacatataggacttttattaccccagaggacctcattaagaagctacactac
agatatactacattttgccacagtccagacactttcaagaagcgagtcagcaagaatacg
ttcttcgtcctggttcgtgtggtggacgagctctgccttgtggagctaacggaggacatc
ttgaagcagctcatggacctggtgttcacgctggtgtgcaacggcgagctcagccttgct
cgtgtgctccgcaagaacatcctggataaggtggagcaaaagaagctgctgcgctacact
aactctctcaagcccctctctgcccggggggtgtctgcaaggccaggaactcttcatgac
ttccgcagtcacgagattgcagatcagctcactcttctcgatgctgaacttttctacaaa
attgagattccagaagttttgctttgggcaaaggagcagaatgaggaaaaaagcccaaac
ctgactcaattcacagagcactttaacaacatgagctattgggtccgctctttgataatt
cagcaggagaaagcccaagacagagagaagctgcttctcaagttcattaagataatgaag
cacttaagaaagttgaataattttaactcctacttggcaatactgtctgctctggactca
gcacccatcaggagattggagtggcagaaacaaacttcagagggattggaggagtattgc
acgctgatcgacagctcctcctccttcagagcgtacagagccgctttggctgaggtggag
cccccatgcatcccatacttaggtctcattctccaggatctgacatttgtccacttggga
aaccctgacctcattgaggggaaggtcaatttctccaaacgttggcagcagtttaacatt
ttggacagcatgcgccgctttcagcaagtgcactacgagctgaagcgtaatgaagacatc
atctctttcttcaacgacttcagtgaccacctggccgaggaagccctgtgggaactgtcc
ttgaaaattaagcccagaaatattgctaggcgcaagacggaccgcgaagaaaagacctag
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integrated database retrieval system
