Cololabis saira (Pacific saury): 133455021
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Entry
133455021 CDS
T09849
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133455021 (arhgef28a)
Membrane trafficking [BR:
csai04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133455021 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
SOS1_NGEF_PH
PH_13
Prok-RING_1
DUF2205
Motif
Other DBs
NCBI-GeneID:
133455021
NCBI-ProteinID:
XP_061589800
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All DBs
Position
11:complement(16641363..16689507)
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AA seq
1483 aa
AA seq
DB search
MLRFCPRTDSVTLTSRKACDSCPQQSIVRLREHLKDPGVLKQIAALRADADENERDNDEG
FSKELHVDKHVLVDNVFDEQLVLSLNDNNEEEENSSSLSDGQSADVRTQLTQQTQASDVG
DSYGVGRVTRDSSGTDGCLWGTVNSGDLLATDTPPPRSDDVHFPCSPPFSPVDQAVTRQN
RPASPEGNERDSPPMDTCDLSPSLVALEVDSEEESSEPKSLLSPLLLDVGKSEDQEETFR
PAPDLACTRTQSASACEPSSKELLEEGVRLRSYSYSSPKISFRPARLAKDNHASDISPDA
ALHSVSHSRSLLQALSLSKSTLSLSLLHPGKPRASSISDQSHEKREVRFRKRAQSADDEG
SMELAESLQHLTLSEFLKEIEEEELDKYSIPTKAESDKYKVIRTLSFLKSRMSSTRNKSK
GKGKDREAKDRQLNGHRFATGSCLGPTLCVVCDKPASGKDLLHCSGCTAFVHKGCKESVP
PCLKKLQDKYAVTGVKNRTASLPQNFTVRESSPQPAIPVATPLPVMTPKERKDAVTLSCS
LAGSLPSSDRLSESSETEYEALKFKSQSEELLPTSVSSTSNDSCFGEDSVDSCIRSLGDI
STDSVDYEAESWSLTVEHKFSKKQDKRAVKRQDVIYELMQTELHHLQTLHIMAEVFRRGM
KEEVQLDSEAVERVFPCLDQLLLFHHAFFASMKERRQSSAQPQGHRNYLIQQIGDLLLHQ
FSEENGDKMKQVYGDFCSHHNEAVSFFKELQQHNKRFQSFIKQQGNNSLVRRREIPECIL
LVTQRITKYPVLLERILHYTQEETEEHTDLSKALAQIREVIAAVDLRVSEYEKHQRLQEV
GNRMENRSTAKLKNGYTFRKQDMMRPGQTLKHQGMLLWKTATGRLKDVLSILLTDTLIFL
QEKDQKYTFATVDQKPPVIALQKLIVREVANEERGMFLISASSAGPEMYEVHTSSKEERN
TWMRLIREAVESCPEEEEGYTSESEEERRVAEARFQKIHKLQESLTSQDQQICSCLEEKL
QIYATLSAQSGRTSAPPAELHLLVQPQLEELPQAAGLLAAALQEAENLKATLSSKSHSPS
SHSQDSDTDSVFTIDPAALAESPSDLSEPSPEHPEAGERDWPEGVALQSPADFHKSDVNN
IDSKVAGRVQTLTQLLYSLQAAVTMQDTCYEVQKLLLQESWRPSPRAQRLHLSSLWGNTL
QEQEKQRNFEKQREEVVLAQRLHCRLRQEKERWERERQARESLQGEQESRLEERERQCQL
AAEKLRHEREELDEQLEEYQQSLERLREGQRSVEKERERLEGQRKLLQTWKHERQTSLPT
VIPHMLISLDGQQESPQSPSREHAGNGSAFVNEAVFAGGSINNRHVHKRNGPSTHNCLNT
LLARSNSRQPPIVTTTHSQQSPDSQEWMMDTRYLYSPGGRFGLQHSTSDHSYNGETWTST
ASGADQYPVLPHPSDPQLDLRALVSLETDSDGEEGREETIVYL
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggttttgtccgcggacagattctgtcaccctcacttcacgcaaggcttgcgac
agctgccctcagcagagtatcgtgcgccttcgagaacatctgaaagaccccggtgtcctc
aaacagatcgctgctctcagagcggatgctgatgaaaacgagagagacaacgatgaaggc
ttcagcaaggagctccacgtggacaaacatgtgctggtggacaacgtttttgatgagcag
cttgttttgtctttgaatgacaacaatgaagaagaagagaactcgtcttcattatctgat
ggtcagtccgctgacgtccggacccagttaacgcagcagactcaggcgagtgacgttggc
gatagctatggagttggtcgtgtgacgagggacagctctgggacggatggctgtttatgg
ggtacggtcaactcgggagatcttcttgcaacagacacccctccgccccgttcagatgac
gtccacttcccctgctcccctccgttctcgcctgtggaccaggcggtcaccaggcagaac
cgcccggcgtcccctgagggcaacgagagagacagtccgccgatggacacatgcgacctc
agccccagtctcgtggctctggaagtggacagcgaggaagagagctccgagccgaagtct
ctgctttccccactcctgttggatgtcgggaagagcgaagaccaagaggaaacttttcgc
ccagctcccgatctcgcgtgcactcgcacccagtcggcctcggcatgcgaacccagttca
aaagaactgcttgaggagggggttcgactacgctcctattcctactcgtctccaaaaatc
agtttccgtcccgctcgtcttgccaaggacaaccacgcgtcggatatcagccctgatgcc
gcgctgcacagcgtcagccacagccgatctctccttcaggccctctctctgtctaaatcc
accctgtctctgtctctgctccaccctggtaagccaagagcgtccagcatatcagatcag
tctcatgagaagagggaggttaggttccgtaaacgagcccagtctgctgatgatgagggc
agcatggagctagcagagtcccttcaacatctcactctgtccgaatttctcaaagaaatt
gaagaggaggagttggataaatacagcattccaaccaaggcagagtctgacaagtacaaa
gtaattcgtaccctgagttttctcaagagcaggatgtccagtacgcgcaacaaaagcaag
gggaaagggaaggacagagaggccaaggataggcagctaaatggacatcgttttgcaacg
ggctcctgtttagggcccactctctgtgtggtgtgtgacaaaccagcttctggaaaggac
cttctacattgctcaggatgcactgcctttgttcataagggatgtaaggaatctgtcccc
ccatgtttgaagaaacttcaggataaatatgccgtgaccggggtgaagaacagaacggcg
tccctcccacagaacttcacggtgagagaaagtagccctcagcccgcgatccctgtggct
acacctctgcctgtcatgaccccaaaggagaggaaggacgccgtgacactgtcatgctct
ctcgctggaagtctccccagtagtgacagactcagtgagagttcagaaacagaatatgaa
gccctgaagttcaagagccaatcagaagaacttctgccgacttctgtgtcctccacctcc
aatgactcctgctttggagaagacagtgtagattcctgtatccgtagtcttggcgacatc
tctactgattctgtggactatgaggccgagtcctggagtctgacggtggagcacaagttc
agcaagaagcaggacaaacgagccgtcaagcggcaggacgttatctatgaactgatgcag
accgagctccatcacctacagaccctgcacatcatggccgaggttttccggcgcgggatg
aaagaggaagtgcaactggactctgaggcggtggagcgggtgttcccttgtctggaccag
ctgctcctctttcaccacgccttctttgcttcaatgaaggagcggcgacaaagctcagcc
cagcctcaaggacataggaactacctcattcagcaaatcggagaccttttacttcaccag
ttttcagaggaaaatggagataaaatgaagcaggtgtatggggacttctgcagtcatcat
aatgaagcggtcagcttttttaaagagctccaacagcacaacaagagatttcagagcttc
attaagcaacaaggtaataactctttagtgcgacggagggagatcccagagtgcatcttg
cttgtgacccaaaggattacaaagtatccagtgctgctggagaggattcttcactatact
caagaggaaacagaggagcacacagacctgtcaaaagctctggctcagattcgagaggtg
atagcagctgtggacctgagggtcagtgaatacgaaaagcaccagaggttacaggaagtg
gggaaccgtatggagaaccgtagcacagccaagctcaagaacggctacactttccgtaag
caggacatgatgaggccgggacaaacgctcaaacaccagggcatgctcctgtggaagacc
gccaccggtcgacttaaggatgtcctatcaatccttctcacggacacacttatcttctta
caagaaaaagaccagaagtatacatttgccactgtggatcagaagcctccagttattgca
ctgcagaagttaatagttcgcgaagtggcgaatgaagagagggggatgtttttgatcagt
gcttcatcggccggcccagaaatgtacgaggtccacacttcttccaaagaggagcgaaac
acctggatgaggctcatcagagaggctgtggaaagctgtcctgaggaagaggagggatac
acaagtgaatcggaagaggagaggcgagttgctgaagctcgtttccagaagatccacaag
ttgcaagagagtttgacaagccaggaccagcagatctgctcttgccttgaggagaagctg
cagatctatgcaacactctccgcccagagtgggaggacgagcgcccccccagctgaactg
cacctgctggtccagccgcagctggaagagctgccacaggcggccgggctgctggctgca
gctctgcaggaggccgagaacctgaaagccactttgtcatccaagtcccactctccatca
agtcacagccaggactcggacacggactctgtgtttaccatcgacccggccgcacttgca
gaatccccctctgacctttccgagccgtcgcctgaacacccagaggctggtgagcgggac
tggcccgagggcgtcgctctccagtctccagctgactttcacaaaagtgatgtgaataac
attgactctaaggttgctggccgtgtccaaacactgactcagcttctgtacagtttgcag
gctgcagtgaccatgcaggacacctgctacgaggtccagaagctgctcctgcaggagagt
tggcgcccctcaccccgcgcccagcgcctgcacctttccagcctctggggcaacaccctg
caggagcaggaaaagcagcgcaacttcgagaaacagagggaggaagtggtgctggctcag
cggctccactgccgcctgcgccaggagaaagagcgttgggagcgagagcgccaggcgagg
gagagcctccagggggagcaggagagccgactggaggagagggagaggcagtgccagctg
gccgcggagaagctgaggcacgagagggaagagctggatgaacaactggaggagtaccag
caaagtctggagcgactccgggagggccagaggagtgtggagaaggagcgcgagcgtctg
gagggtcagcggaagcttctccagacctggaagcacgagcggcagaccagccttcccacc
gtcatacctcacatgctcatcagtctggatgggcagcaggaatcgccacagagcccatcc
agagagcacgctggcaacggctctgcgtttgtgaatgaggctgtgttcgccggcggcagc
attaataaccgccacgtccacaaaagaaatgggcccagcacacacaattgtctcaacacc
ctgctggccagatccaacagcagacagccccccattgttacgaccactcacagccaacaa
tcaccagactcccaggaatggatgatggacacgagatacctgtacagccctggaggaagg
ttcgggctgcagcactcaaccagtgatcacagctacaacggggagacctggacgtcaaca
gcgagcggagctgaccagtatccggtgctcccgcatcccagtgaccctcagctggacctg
agagcacttgtttccttggaaactgacagtgatggggaggagggcagggaggaaacaatt
gtgtacctctga
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integrated database retrieval system
