Cololabis saira (Pacific saury): 133455031
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Entry
133455031 CDS
T09849
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
133455031 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133455031 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133455031 (clip1b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133455031 (clip1b)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
133455031 (clip1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Rab11-FIP3
CCDC3_C
CCDC192
Motif
Other DBs
NCBI-GeneID:
133455031
NCBI-ProteinID:
XP_061589823
LinkDB
All DBs
Position
11:complement(17136963..17196990)
Genome browser
AA seq
916 aa
AA seq
DB search
MSTQGKASGLKPPSKIVRPPGVPSRTSPSSGTPKPLPPEKPSGGETSPTQDRNPDFQTGE
RVWVNGNKPGYVQFVGGTQFAPGQWAGIVLDEAIGKNDGSVAGVRYFQCEDGRGIFTRPS
KLSRTPVAEKAEKEENGGRASPAQGASAANKSAPASSITTAQGTGIKMSGNLNRMVVSTE
SVSNLSDPDSMKKNQRELRLGDRVLVGGSKAGVVRFLGETDFAKGEWCGVELDEPLGKND
GAVAGTRYFQCLPRYGLFAPVHKVTRIGFPCTTPTKAKSSRRRSTLKRSPSASSISSLSS
ATSSISGKPSRAGLMSETSARYARKISGTTALQEALKEKQQHIEQLLAERDLERCEVAKA
NSHVVEVQQEVALLRKGQDQYAVESEAKLDNLRSLVEAADRDKVELLNQLEEEKRKVEDL
QFRVEEECITKGDLETQTRLEHAHIKELEQSLFFEKTKAEKLQRDLEDARVATVSERSRI
MELEREVADLLLRLRASQQKEDAASLSQQQISSLKAQVQSQEKKISELSVDLESKQKELQ
SAEQDKTSLEQQLTTLKQKLEAAEEENRKTAKTMQELEQSLECTKKDAETRNEESLCREA
ELRAQLTQTNEKLERTTLSFEQLTNQKTTLEFELEALKQQNSGYQEELSPSKKQSSSENQ
LVGVLFQDEEMKLASQKSEHLGEHNEERYRQQPDMKTRETICTQDTEEEVNLQNSTGAKD
QELESLRNEIAMLRGENAMAKTLQSAVATLEKDKAQLQSRVQSLEQRLMGTQALEGEDGD
APPSGDAALQQLREEKEFAEGQINFLNSVIVDLQRKNEELKIKLKKFALADFTNEMDGFP
GETVHKREKKSTPRLFCDICDCFDLHDTEDCPTQAQSPDSVPHTTYHGNPADERPYCDIC
EAFGHATASCNDDQTF
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacagggcaaggccagcgggctgaaaccccccagtaaaatagtccgtccacca
ggggtgccatcaaggacgtccccttcatctggtactccaaaaccgcttccccctgagaag
ccctctggaggtgagacctccccgacccaggacagaaacccagactttcagaccggcgaa
agggtctgggtcaatggcaacaagcccggctacgtacagtttgttgggggcacgcagttt
gctcccgggcagtgggcgggcatcgttctggacgaggcaatcgggaagaatgacggctca
gtggcgggtgtccggtacttccagtgtgaggatgggcggggcatattcacacgaccttca
aagctgtccagaactccagtggcggagaaggcggagaaggaggagaacggagggcgggcc
agcccggcacaaggagcctctgcagcaaacaagtctgctccggccagctccatcaccacc
gctcagggaacggggataaagatgagtggcaatctcaaccggatggtggtatccaccgag
tcggtgtccaacctgtcagacccagactccatgaagaagaaccagagggagctgaggctg
ggagaccgtgtgctagtcggtggttccaaggccggagtggtgcggtttcttggagagaca
gactttgccaaaggagagtggtgcggagtggaactggatgaacctctggggaagaatgat
ggagctgtggccggaaccagatacttccagtgcttgcccaggtatggcctctttgccccc
gtccacaaggtgacgcggattggcttcccctgcaccacccccacaaaggcgaagagctca
cgtaggaggtccactctcaagaggagccccagtgcatcctccatcagctccctcagctcc
gccacctcctccatcagtgggaagcccagccgggcaggactgatgagtgagacatctgct
cggtatgctcgaaagatttcgggcaccacagcgttgcaggaggctctgaaggagaaacag
cagcacatcgaacagctgctggcagaaagggacctggagaggtgtgaggtggccaaagcc
aacagccacgtggtagaggtccagcaagaggtggctctgctgaggaaagggcaggatcag
tacgccgtggagtctgaggccaagctggataacctgcgctcgttggtggaggccgcagat
cgagacaaggtggagttgctcaaccagctggaggaggagaagaggaaagtggaggacctg
cagtttcgtgtggaggaggaatgcatcaccaaaggagacctggagacgcagaccaggctg
gagcatgcacacataaaggagcttgagcagagcctgttctttgaaaagaccaaagctgaa
aaactccagagggatttagaggacgcgagggtggccacggtgtctgagcgctccaggatc
atggagctggagagggaggtggcagacctccttctcaggctccgggcgtcccagcagaag
gaagacgctgcgtctctgtcgcagcagcagatcagcagcctgaaggcccaggttcagtcc
caggagaagaagatcagtgagctgagcgtcgatctggagagcaaacagaaggaacttcag
tctgcagagcaggacaagacttctctggagcagcagttaaccaccctgaaacagaagctt
gaggcggccgaggaggagaacaggaagacggcaaagaccatgcaggagctggagcagagt
ctggagtgcacaaagaaagatgctgaaacacggaacgaggagagtctgtgcagggaggcc
gagctgagagcgcagctgacgcagactaatgaaaagttggagaggacgacgctgtcgttt
gagcagctgaccaaccagaaaactacactggagtttgagctcgaggctttgaagcagcag
aactccggataccaggaagagctcagtccgtccaaaaagcagagcagctcagaaaaccag
ctggtcggcgtcctcttccaggatgaggagatgaagctggcctcccagaagtctgagcat
ctcggcgagcacaatgaggagcgctaccgtcagcagccggacatgaagactcgagaaacc
atctgcactcaagacactgaggaggaagtaaacctccagaactccaccggagccaaagac
caggaactagaaagtctccgtaacgagattgctatgctgagaggagaaaacgccatggcc
aaaaccctgcagtcggccgtggcgacattagagaaggacaaagctcagcttcagagtcgt
gttcaaagtttagagcaaaggctgatgggaacgcaggctctggagggagaagacggggac
gctccaccctcaggtgatgcagctctgcagcagctgagggaagagaaggagtttgctgaa
ggacagatcaacttcctgaacagtgtgatcgtggacctgcagcggaagaacgaggagctg
aaaatcaaactgaagaagttcgctctggctgatttcaccaacgagatggatgggttccct
ggagaaacagtgcataagcgtgagaagaaatcaaccccgcgtctgttctgtgacatctgc
gactgcttcgaccttcatgacacggaggactgtcccactcaggctcagagccccgactcg
gtacctcacaccacctaccacggcaacccggccgacgagcggccctactgcgacatctgc
gaggccttcggacacgctaccgcgtcttgcaacgatgaccagaccttctaa
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