Cololabis saira (Pacific saury): 133455039
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Entry
133455039 CDS
T09849
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133455039 (sbno1)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133455039 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
PLAC9
Motif
Other DBs
NCBI-GeneID:
133455039
NCBI-ProteinID:
XP_061589836
LinkDB
All DBs
Position
11:17381054..17403056
Genome browser
AA seq
1446 aa
AA seq
DB search
MRRSGLINKDGVSAERPRGQHTHSDPQLRRPSGGQMDPGQDLLLAALSESGICPNDIGLL
DIDCQDAAQTPTTQQSISISALDVGVGAESVDVVRPEAPPTAVPIVTIRHKPQPSTTTFV
LNQLNQLPSLGTTVTKQSVTNPVKHTITVTKVVHVANSALRGSSNPSLTNVPPSVSTVVP
SNKDQQIQLKDLLRTGNVRTVGLKGNSLMELMKLKPPPDIAPPVATATATGPGEINNGIK
KDALGKDVSRIWIKDDLKIQNFSHSMKLPGMKEEEEPEEEEEDELGHAETYAEYMPMKLK
IGLRHPDPVVETSSLSSVNPPDVWYRLSIQEEVIDSGWLSALQLEAITYAAQQHETFLPS
GDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNI
QVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFQQLLHWCGEDFDG
VIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRL
GIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIDEVSLT
QQYINMYNKSVRLWVRAREKFQQAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVR
RVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPA
PDRQKLYNLLGIDLSAKKTPSPSDSTAEAEQKGKKRKGSDIKKRQKKKPRKHGGLSGTSS
EESEESEESERESGKDSDDSFKSVSSADEDDDFNPFRDESDNDEEDDPWLIRKEPKRGKE
KKKKKKKNTKRKSIDPDSIQSALLASGLGSTRPAFTASVKPPSTSAAVKTETQDSCETSQ
DAVELAQKMKRQLLEQLEELAENLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGTI
SYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQADRRVKNQRRRVHMTL
ELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRR
ATETRDLSRFNFDNKYGRNALEIVMKSIVKLDVPLVSPPSQFKGDFFKEIQIGLIGVGLI
NVEDRSGALSLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLAAVIQEAKKNGRYDMG
ILDLGSGDEKVKKLDCRKFLTPGYTTSGHVELFTVGVERGMSWEEATHVWADQNGPDDGF
YVQMRNNKKTAILVKEVNAKKRLFLVHRPNTGRQVKLETYGDIKKKFKKVLSDDAKLHWN
DQYKSSAKICSHAYWRGNCKKASVGLLCEVGLRCRTYYVLCGSVLSVWNELEEVLTPVSG
TNVKVQIVRLRTEDGQRIVGLIIPANCVSPLMNKLSTSDQSQQLAVQEQQKRQQLHPQSL
SHTHNT
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagcggtttgataaacaaagatggcgtgagcgcggagcggccgcgaggacaa
cacacacactccgacccacagctcaggcggccgtccggcgggcagatggatccgggacag
gatttacttcttgctgctttaagcgagagtggaatttgcccaaatgatattgggctgcta
gatattgactgtcaggatgcagcacagacccctacgacccaacaatctatatccatcagc
gctctggatgttggtgtgggagcagagtcagtggatgtcgttcgacctgaagctccacct
actgctgtccccattgttacaatcaggcataaacctcagccatcaaccaccacgtttgtc
ttaaatcagctaaatcagttaccatcgctgggaacaactgtgaccaaacagtcggtcacc
aacccagtcaagcataccataactgtcaccaaggtggtccatgtggctaattcagcacta
cgaggttcatcaaacccctcattgacgaatgttcctccttcagtgtccacagtagtgcct
tctaacaaagatcagcagattcagttgaaagaccttcttcggactggaaatgtgagaact
gttggcctaaagggcaacagcctgatggagctcatgaagctcaagcctccacctgatatt
gctccacctgtggcaactgcgacagccacaggcccaggtgaaattaacaatggaatcaaa
aaagacgcgttggggaaagatgtttcccgaatctggattaaagatgatcttaaaatacaa
aacttttcacattctatgaaactaccagggatgaaagaagaggaggaacctgaggaggaa
gaggaagatgagctaggtcacgcagagacctatgcagagtacatgccaatgaaactaaag
atcggcctgagacatcctgatccagtggtggagaccagttctctgtccagcgtgaacccc
ccagatgtgtggtacagactgtccatccaagaggaggtcattgatagtgggtggttgtct
gcactgcagctggaagccatcacgtatgcagctcagcaacacgagacattccttcctagc
ggtgatcgagcagcgtacttgattggtgatggagctggtgtggggaaaggccgaactatt
gcagggatcatatatgagaattatcttctgggcagaaagagatcactctggtttagcgtc
tcaaatgatctaaagtatgatgctgaaagggatctaagggacatcggagcgaagaatatc
caggttcattcactgaataagttcaaatatggaaaaatctcctccaaacacaatgggagt
gtaaaaaaaggcgtgatcttcgccacctactcatccttgatcggagagagccaatcagga
gggaagtacaagaccagattccagcagcttcttcactggtgtggggaggactttgatgga
gtcattgtctacgatgagtgtcacaaagccaaaaatgtgtgtcctattggatcctcgaag
ccaacaaaaactgggcttgcggtgttggagctgcagaacaaactccccaaagctcgggtt
gtatacgccagtgctacaggtgcttctgaaccgcgaaacatggcatacatgaaccggctt
ggcatatgggggcacaaaacgcccttcagagaatttgggaattttatccaagctgtggag
cgcagaggcgttggtgccatggagatagtagccatggacatgaagctgagaggcatgtat
attgcacgacaactgagttttactggggtgactttcaagatcgatgaggtttccctgact
caacaatatatcaacatgtataacaagtctgtgaggctgtgggttcgtgcacgggagaag
ttccagcaggccgctaatctcatggatgcagagcagcgtatgaagaagtccatgtggggg
cagttctggtctgctcaccagaggttctttaaatatctctgcattgcttccaaagtccgc
cgagtggtccagctggccagagaagaggtccagaatggaaagtgtgtggtgattggtctt
cagtccactggtgaagcaagaacactggaggctttggaggaaggaggaggagaactcaat
gactttgtgtcaacagcaaagggtgtgctgcagtccctaatagagaagcactttccagct
ccagacagacaaaagctttacaacctactgggtatcgacctctctgcaaagaagaccccc
tcccccagtgacagcacagcagaggccgaacagaagggaaagaaaaggaagggttcagac
atcaagaagcggcagaaaaagaagcctcgtaagcatggtggtctgtcagggacgagttca
gaggagagcgaggaatctgaggagtcagagagagaatctgggaaagacagcgatgacagc
ttcaaatctgtcagctctgcagacgaagacgacgacttcaatcctttcagagacgagtct
gataacgatgaagaagatgatccatggcttatcagaaaagaaccaaaaaggggcaaagag
aagaaaaagaagaagaagaagaatacaaagaggaagagcattgatccagactccattcaa
agtgcgttgttggcatccgggctgggctccaccaggcctgctttcactgcctcagtcaaa
ccaccaagcacatctgccgcagtcaagacagagactcaggatagctgtgagacaagtcag
gacgcggtggaacttgcgcagaaaatgaagagacaattgctggaacaactggaagagctg
gctgagaatctgcctcctaacacgctggatgaactgatagatgaactgggagggcctgaa
aacgtagccgagatgaccggtcgtaaaggtcgcgtggtcagtaatgatgacggcaccatc
agctacgagtcccgctctgagctggacgttccagtggaaatcctcaatctcacagaaaag
cagaggttcatggacggagagaagaacatagccatcatctcagaggccgccagctcaggt
atctccctgcaggccgatcggcgagtgaagaaccagcggcggagagtccacatgactctg
gagctgccgtggagcgcagacagagccatacagcagtttgggagaacacaccggtcaaac
caggtcacagctcctgaatacgttttcctcatatcagaactcgcaggagagcagagattt
gcttccattgttgcaaaaagactagaaagtctgggtgctctcactcatggagacagacga
gccacggaaacgcgagatctcagcaggttcaattttgacaacaaatacggcagaaatgct
ctggaaattgtgatgaaatccatcgtgaagctggatgttccattagtgtctccgccgtct
caatttaaaggggatttcttcaaagaaattcagataggcttgattggcgtggggctcata
aatgtggaggacagatcgggggctctgtcactggacaaagactacaacaacatcgggaag
tttttgaaccgcattctgggcatggaggtccatcagcagaacgccttgttccagtacttt
tctgacacgctggcagcagtgatacaggaagccaagaaaaatggccgatatgacatgggc
atcctcgacctcggctctggtgacgagaaggtgaagaagcttgattgcaggaaattcctt
acacccggctacacaacatcaggacatgtggaactcttcactgtcggtgtggagagagga
atgtcctgggaggaagccacgcatgtgtgggcggaccagaatggacctgacgacggcttc
tatgtacagatgagaaataacaagaaaacagcaatactggtgaaagaagtgaacgctaaa
aagaggttgttcctggtgcacaggccaaacacgggcaggcaggtcaaactggagacctat
ggagacattaagaagaagttcaagaaggtcctgtcagatgatgccaagctccactggaat
gatcagtacaagtcttcagcaaagatatgctctcatgcgtactggcgggggaactgtaag
aaagcatcagtgggtctactgtgtgaagtcggtcttcggtgtaggacgtactacgttctc
tgtggttcagtgctcagtgtttggaacgagctggaggaagtgcttaccccggtcagcgga
accaacgtgaaggtgcagattgtccgcctcaggacagaagacggacagaggatagttggt
ctgatcattcctgcgaactgcgtgtctccgctgatgaacaagctctcgacgtcggaccag
agtcagcagctggctgtgcaggagcagcagaagaggcagcagctccaccctcagagtctc
agtcacacacacaacacatag
DBGET
integrated database retrieval system
