Cololabis saira (Pacific saury): 133455083
Help
Entry
133455083 CDS
T09849
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133455083
03041 Spliceosome [BR:
csai03041
]
133455083
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133455083
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133455083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_ACIN1
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133455083
NCBI-ProteinID:
XP_061589904
LinkDB
All DBs
Position
11:19630335..19653683
Genome browser
AA seq
386 aa
AA seq
DB search
MDEEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NESTSTKQLSFDEVVNQSSLSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIDGYVVKCYWGKETTDVVQGPIQQVQMAQQNTLGFAAQ
PYSQWGQWYGNTQQIGQYVPNGWQVPSYGVYGQSWEQQGYNQLHAGAGWTGVGAISNGSI
VEPGQGVNGTVLTNQTGMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagcagccgaaaacgctgtatgtggggaatctgtccagggatgtgacagaa
gctctcatcttggagctgtttggacagattggaccctgcaaaagctgtaaaatgatagta
gatacagcaggtcatgatccctactgcttcgtggagttttatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtgaaggtcaactgg
gccacaacgccaacgagccagaagaaagacacaagtagtcatttccatgtttttgttgga
gatttaagtcctgaaatcaccactgatgacataaaggcagcgttcgctccttttgggaaa
atatcggattgtcgagtggtgaaagacatggccacgggtaaatctaaaggttatggattt
gtctcttttttcaacaaatgggatgcagagaacgccattcagcagatgggaggtcagtgg
ttggggggaaggcagatcaggaccaactgggccacgaggaagcctgctcccaaaaccaca
aatgaatcaaccagcaccaagcagctatctttcgatgaggtggtgaatcagtccagcctc
agcaactgtaccgtctactgcggaggagtcacatcagggctcacagagcaacttatgaga
cagaccttctcacctttcggccaaataatggaaatccgtgttttcccggagaagggctac
tcgtttgtgagattcaattctcatgaggcagcagctcatgccatagtttctgtcaacggt
acttccatagacgggtatgttgtgaaatgttactggggcaaagaaacgacagacgttgtc
caaggccccattcagcaggtacagatggcacagcagaacacgttgggcttcgcagcgcag
ccctacagtcagtggggccagtggtacggcaacacgcagcagatcggtcaatatgttccc
aacgggtggcaggtgccaagttacggggtatacggacagtcctgggaacaacagggctac
aatcaattacatgctggagccggatggacaggagtgggcgccatcagcaacggcagcatc
gtggagcctggacagggggtcaacgggacagtgctaactaaccagacgggcatgggcacc
gctggctaccacacccactga
DBGET
integrated database retrieval system
