Cololabis saira (Pacific saury): 133455107
Help
Entry
133455107 CDS
T09849
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133455107 (ttc28)
Cilium and associated proteins [BR:
csai03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
133455107 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_17
TPR_14
Rapsyn_N
TPR_16
TPR_NPHP3
TPR_9
TPR_11
TPR_6
TPR_19
Paf67
Motif
Other DBs
NCBI-GeneID:
133455107
NCBI-ProteinID:
XP_061589962
LinkDB
All DBs
Position
11:complement(21335519..21480893)
Genome browser
AA seq
2522 aa
AA seq
DB search
MEKQRPRKEKFSLFGSRSTSKTTNPPSSSSSSPVICSSHAHEQVDRLSGCGPAVLSKADF
LERVRHSNLACQQGEFELAVRLYTEALSADPQNCILYSNRSAAYLRLGQYSTALDDAIKA
RLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRGS
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTHGFHGASVVVLEAGLKIGTCSLKLRGSVFS
ALSSAYWSLGNVEKSMAYMQQDLDVAKTLGDQSGECRAHGNLGSAFFSKSNYREALANHR
NQLVLAMKLKDREAASGTLSSLGHVYTAIGDYPNALASHKQCVLLARQMQCQLSEARQLG
NMGAVYTALGDFTNAVQCHEQHLDIAKTLENQREEARAYSNLGSAYHSQRDFDKAISYHT
RVLQLAQQLADRAIEMRAYAGLGHAARCMQDLERAHQYHQNQLEIAEELQDRPAQGRASS
NLGIIHQMKGEYEMALKLHKAHLSFAQELGDYAALGRAYGNMGNAYNALGVYEQAVRYHR
QELQISLEVNDRSSQASTHGNLAVAYQALGAHDRALQHYLHHLTIARELRDTQSEARALA
NLGNFHSWRGEYAQALPYYQQYLALTPGLQDLEGEGKVCHNLGYAHYCLGQYRDAARYYE
QDLALAKDLQDKLAQAKAYCNLGLAHKALGEHNKAEECQRYLLSLARTLDNRQAIFRALG
NLGDVYVCRGDPQGAVKFYQQQLSLAQKAGEQKMEADAYSALGSVHRLLRQMDPALSFHS
QELTIRKDLGDQQGECWALGHLAAVHMALGDYATAFQCYETQLGLALELRDASLEAQVHG
NMGITKMNMGVFEEAIGYFEQQLAMLQQLSGAEAMLDRGRAFGNLADCYDSLGDYEEAVK
YYEKYLTVAQSLNHVQDQEKAYRGLGNAHRCMGNLQQALVCFEKRLVVAHELGGEGGGKA
QAYGELGTLHSQLGNYEQALSCLEHQLNIAHSAGDKSLEAEASGALGGVYQLMADNETAL
QWHQRALDIAEQTGCVRSQGRAYGNLGMTYEALGNYERAVVFQEQHLSVAAQTNDLLAKT
LAYGSLGRTHHALQNYAQAVMYLQEGLRLAEQLARKEDEAKIRHRLGLSLWASGNLEEAQ
HQLYRASALFETFRHETQHSLDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAERGRT
RAFADLLVERQKGSQQAPGADPYIPVTVEQILETVNGQRAVVLYYSLAGGFLYSWLLSPG
SGIVKFHETYLGEAGAETPEFQDGGGTPQGAGPLSLEQYITNAREALGVDIHQSRACSSS
ETESEAGDLLEQQFEDLNNTDPSGYLRMVSRNNLFNRSCQSMTSLYSTTASSMKDGLSPL
CRPSSIGKPPLRALYDLLIAPMEVGLMHSSGPVGRNRQLLLVLEGELYLIPFALLKGSSS
NEYLYERFSLISVPSLASLGATAKPHPRRGGPLLCPDGGSVTAVIGAPRLPASVMDRWLW
GPLPSAQEEALWLGEQLGCHPLTGANATKERVLAALSQAECVHFATHISWKLAALVLTPS
QQQAGGEGPDGVAKGKSVDADGALRGWFPKSHSSLERLRGLDERNEDGDSVCESPPLQDF
LLTAADILDLCLTVKLVVLRLYPESSSRISADGVVGLTRALLAAGVQCVCVSLWPVPVAA
AKLFTHTLYTAFLNGTKASAALTEAMKALQNSKHFSHPSNWAGYMLIGGDVKLNSPMSVV
GQALAEILQYAEKARDALRVLLHLVEKSLQRIQGGHCNPMYTSQQSVENKVGGVPGWQAL
LSAVGFRLDFSGSGAGLPAAVFFPTSDPGDRLQQCSTTLQSLLGLTPPALQALCKLVTAS
EAGDQLIQKLHQVLVQLQSGDKDQDFPLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVG
QEDVVLKTGKQASRRNMHFALQSLLALFDSTELPKRLSMDSSSSLESLSSSQSASQPQSL
PLSLSCYPPQPSFLPPVCPDNLSCDAISVYSLSSLASSLSFLSRPEPAGSDITSQRSHQQ
EPERLCGGAGLYASHRQSGGLARGRLNNHGGGLAEGEEEEYEGFSIISSEPLGRGGRECD
TLPLPAGHRHGRGGAGKTSVGGPPLTVSSKGSISTPTSPLKAPPLPLKGLSGPKIRQEIS
SPPRTGKGKVSSSESDQSSTETDSTVKSQEERMGPAGQMDPQELAQKILQETQNHMQAVE
SLQKAHVRGKTLRVAEGQEDAHSRQTSQSTPTTPTFTPAGGARRFQPSETSAFSRPPSRA
SLQASLSPLSVKTPPPTRPKPPSRSSSLQKIASGYNSPANASPSSSVLVTEKSSPHPVVS
HDVRLQAPLKLKYSSSAYTTHISPSHSPAGTAPSPALSYSSAGSISASSSPANTPNLTRS
MQDNKSHPVNNVRTFRSGAGQKQEPCPGSLFRGGNKKMSTVQRDVLSLLDLSPRHESARK
HMDTPEDDSSDRRPNGHQKQEVGAPPSSSAGPPTNSKGGIRLSSGNGYKFLSPGQFFPSS
KC
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaagacccaggaaagagaagttctctctctttggctctcgctccaccagc
aaaaccaccaaccctccctcttcctcctcttcctctcctgtgatctgttcatcacatgcg
catgaacaggtggatcgactgtccggctgcgggcccgccgtcctgagcaaagccgacttc
ctggagcgcgtacgccacagtaatctggcctgccagcagggggagtttgaactggccgtg
cgtctctacacggaagcgctcagcgctgacccgcagaactgcatcctgtacagcaaccgc
tcggcagcgtatctgagactgggccagtacagcacggctctggacgacgccatcaaggct
cgcctcatcaaccccaaatggcccaaggcttactttcgtcagggggttgccctgcagtac
ctgggtcgccatgccgatgccctggcggcattcgcctccggcctcgcacaagaccccaag
agcctccagctgctggtcggcatggtggaggctgccatgaagtcaccgctcagaggctca
cttgagcccacttaccagcagctgcagaagatgaagctggacaagagtccattcgtggtc
gtgtcagtcatcggccaggagctgctgacccacggtttccatggcgcctctgtcgtagtg
ctggaggcggggttgaagatcggcacgtgttcgctaaagcttcgcgggtccgtcttctcc
gcgctgagctctgcgtactggtctctaggcaatgtggagaagagcatggcctacatgcaa
caggacctggatgtggccaagactttaggggatcagtcaggtgaatgccgtgctcatggg
aacctcggctctgccttcttctctaaaagcaactacagagaagctctggccaaccacaga
aaccagctggtgctggccatgaagctcaaggacagagaagccgcgtccggcaccctcagc
agtctgggccacgtgtacacagccatcggcgactaccccaacgccctggccagccataaa
cagtgcgtgctgctggcgcgacagatgcagtgccagctctccgaggctcgccagctgggc
aacatgggcgctgtttacacagcgctgggagacttcaccaacgctgtgcagtgccacgag
cagcacttggacattgcaaagactttggagaaccagcgggaggaggcgcgggcgtacagc
aacctgggcagtgcataccactctcagcgggactttgacaaggccatatcgtaccatacc
agagtgctgcagctggcacagcagttggccgacagagcgatcgagatgagggcgtatgct
ggcctgggacacgccgcccgatgcatgcaggacttggaacgggcgcatcagtaccaccag
aaccagctggagattgctgaggagctgcaggacagaccagcacagggccgagcctcttcc
aacctgggcatcatacatcagatgaagggggagtatgaaatggctctgaagctccacaag
gcccacctgtccttcgctcaggagctgggggactacgccgccctggggagggcctacggt
aacatgggcaatgcctacaacgcacttggcgtctatgaacaggcggtgcggtaccaccgc
caagagctgcagatctctctggaggtgaacgatcgttcatcgcaggcctccacacatggc
aatcttgctgtggcctatcaggcactgggggctcatgaccgagctctccagcactacctt
caccacctgaccatcgcacgagagctgcgggacactcaaagtgaagcaagagctctagcg
aacctgggtaacttccacagctggaggggtgagtatgcgcaggccttgccctactaccag
cagtacctggccttgaccccggggttacaggacctggaaggggaaggaaaagtctgccac
aaccttggctatgctcactactgcctgggacaatacagagatgcagccaggtattatgag
caggacttggccttggctaaagacctccaggacaaactagctcaagccaaagcgtactgt
aacctgggtctggctcacaaagctctgggagagcacaacaaggcggaggagtgtcaaaga
tacctgttgtcgctggcgcggacactggataacagacaggccattttcagagcactcggg
aacctcggagatgtttacgtgtgtcggggcgacccccaaggagccgtgaagttttaccag
cagcagctgagcctggctcagaaagccggtgagcagaagatggaggcagacgcttactca
gcgctgggatcagttcacaggctgcttcgacagatggacccagccttatccttccacagc
caggagctgaccatccgcaaggatctgggtgatcagcagggtgagtgctgggccctgggc
cacctggcagcggtccacatggccctgggggactacgccacagccttccagtgctacgag
acccagctcggcttggcactggagctcagggacgcctctctcgaggcccaggtccacggc
aacatgggcatcaccaagatgaacatgggggtatttgaggaagcgatagggtattttgag
cagcagctggccatgctgcagcagctgagtggagccgaggccatgctggacagaggcagg
gcctttgggaacctcgcagactgctacgactcgctgggagactacgaagaggccgtcaag
tactacgagaagtacctgacggtggctcagagcctcaaccacgtccaggaccaggagaaa
gcctaccgagggctcggcaatgctcacaggtgcatgggcaatctccagcaagcactggtg
tgctttgagaagcgcttggtggtggctcacgaactgggaggggaaggaggggggaaggct
caggcttacggcgagctgggtaccttacacagtcagctaggcaactacgagcaggccctg
tcctgcctggagcaccagctgaacatcgctcactcagccggggataaatctttggaggca
gaggcaagcggcgcgctcggaggcgtttatcagctcatggcagacaacgagacggctctg
cagtggcaccagagagccttggacatagcggaacagacgggctgcgtgaggagccagggc
cgtgcctacggtaacctcggaatgacctacgaagctctgggaaactacgagcgagccgtt
gtcttccaggagcagcatctcagcgtggctgcgcagaccaacgacctgctggctaaaacc
ctggcctatgggagcctggggaggacacaccacgctctgcagaactacgctcaggccgtc
atgtacctgcaggagggtctgcgtctcgctgagcagttagctcgcaaagaagatgaagcg
aagatccgccatcgccttggtctgtctctgtgggccagcgggaacctggaggaggcccaa
caccagttgtacagagcgtctgcgctgtttgagacgtttcgccacgagacgcagcacagc
ctggattacaagctatccctctttgatctgcaaaccagctcataccaggctctccagaga
gtccttgtcagccttggccggcacgatgaggcgctggccatagccgagcgagggcgaacc
cgagcatttgccgacctcctggttgaacgccagaaaggaagtcagcaagcgccgggtgcc
gacccttacatcccggtcaccgtggagcagatcttggagacggtcaacggtcagagggcc
gtggtcctctactattctctggcgggggggtttctgtacagctggctgttatctccaggc
tcaggtatcgtgaagtttcacgagacgtatctgggagaggcgggagcggagacgcccgag
tttcaggacggaggaggaaccccgcagggtgcaggcccgttgtccctggagcagtacatc
accaatgccagggaggctctgggtgtggacatccatcagagcagagcctgctccagcagc
gaaacggagagtgaagctggagatctgctggagcagcagttcgaggacctgaacaacacc
gacccgtcaggctatctccggatggtgtccagaaataatctctttaacagaagctgtcag
agcatgacgagtctgtacagcaccacagcatcttctatgaaggacggcttatctcctctt
tgtcgaccaagtagcattggcaaacctcctctgcgagccctttatgatctactcatcgcg
cccatggaagtgggcctgatgcacagcagcggaccagttggcaggaacaggcagctcttg
ttagttctggagggggaattgtacctgatcccgttcgccttgctcaaaggcagctcctcc
aacgaatacctgtatgaaaggttcagtctcatctctgtgccttctttagccagcctggga
gccacagccaagcctcatcctcgccgcggtgggcccctgctttgcccggatggaggctcg
gtgactgcagtgatcggagcgccgcgcctgcccgccagcgtcatggaccgctggttgtgg
gggcctttaccgtcagcccaagaggaagccctgtggctgggggaacagctgggatgtcac
ccgctgactggggcaaacgccacgaaggagcgtgttttggcagccttgagtcaggcagag
tgcgttcactttgcgactcacatatcctggaagctcgctgccttggtcctcaccccgagc
caacagcaagccggaggggaggggccagacggcgtggccaaagggaaatctgtggatgca
gatggagcgctcaggggctggtttccaaagagtcacagcagcctggagaggctccgaggg
ctggacgagaggaacgaggacggggacagtgtgtgtgaaagtcctccgcttcaggacttc
ctcctcactgctgcggacatactggacctctgtttgaccgtcaaactggtggttctgagg
ttgtacccggagtccagcagcaggatctcggctgacggagtggtgggtctgacccgagcc
ctcctggctgcaggtgtccagtgcgtgtgcgtctccctgtggcccgtaccagtcgccgcc
gccaaactgttcacacacaccttgtacaccgccttcctaaacgggaccaaagccagtgcg
gctctgacggaggcaatgaaggcgctgcagaacagcaaacacttttcccacccgtccaac
tgggctggctacatgctgattggcggtgacgtgaagctcaacagtcccatgtctgtggtc
ggacaagccctggcagagatccttcagtacgcagagaaggccagggatgccctcagggtg
ctgctgcacctggttgagaagtccttgcagcgcatccagggcggccattgtaacccaatg
tacacgtcgcagcaaagcgttgagaataaggttgggggggttccgggatggcaggccctc
ctgtcggccgtgggctttcggctggacttctctggtagcggtgcaggactccctgcggcc
gtttttttcccgacgtcggaccctggagatcggctgcagcagtgcagcaccaccctgcag
tctctacttggtctgacccccccggctctgcaggctctctgtaaactcgtcacggcgtct
gaagcaggagaccagctcattcagaagcttcaccaagtcctggtgcagctgcagtcgggt
gacaaagatcaagactttccgctggctcccattcaagtgtcgataagcgtgcagctctgg
aggcttccgggctgccacgagttcctggctgcgctcggttttgatctgtgtgaggttggt
caggaagacgtcgtcctgaagactgggaaacaggccagcaggcgcaacatgcatttcgcc
ctccagtctcttcttgcgctgttcgactccacagaacttcctaagcggctgagtatggac
agttcctcctccctggagtcgctgtcctcatcccagtcggcctcgcagcctcagtcgttg
ccgctgtctctcagctgctaccctcctcagccctccttcctgccccccgtgtgtcccgac
aacctctcctgcgacgctatctccgtctacagcctcagctccctcgcctcctctctcagc
ttcctgtcccgtcctgaacctgcaggaagcgacatcactagccagcgctcgcatcaacaa
gagccagagagactctgcggaggagccggcctgtacgcctcacaccggcagtcaggtggc
ctggcgagaggtcgcctgaacaatcacgggggaggattagcggaaggggaggaggaggag
tacgaaggcttctccatcatcagcagtgagccgttgggacgaggaggaagggaatgtgac
acactgccgctgcctgcaggacacagacatggcagagggggtgctgggaaaacgtcagtg
gggggccctcctttaaccgtttcatccaagggaagcatcagcacaccaacatcccccctg
aaagcaccgccgctgcccctcaaaggcctcagcggccccaagatcagacaggaaatctca
tctcctccacggactgggaaagggaaggtcagcagctctgagtcggatcagtcgagcacc
gagacagacagcaccgtcaaatctcaggaggagagaatggggcctgcaggacaaatggat
ccacaggaactggcccagaagatcctgcaagagacccagaaccacatgcaagctgtggag
agcctgcagaaagcacacgtcagagggaagactctgagagtagccgagggacaggaagac
gctcacagcagacagacgtctcagtccacacccacaacccccactttcacacctgcaggt
ggagcgcggcggtttcagccctctgagaccagtgcattcagcagacctcccagcagggcc
agtctgcaggcgtctttgtctcctctttctgtcaaaacacctcctccaactcgacctaaa
cctccatctcgctcctcctcgctgcagaaaatcgcttcaggctacaacagtccagccaac
gcctccccttcttcgtcagtcttggtcacagagaagagttcaccccatcctgtggtttcc
catgatgtgcggctgcaggctccgctcaaacttaaatactcaagctcagcttacactacc
cacatctcaccttcacactctcctgccggcaccgccccgtctccagccctttcctattcc
tctgcagggtccatttcagcctcgtccagcccggcaaacacccccaacctcacccggtcc
atgcaagataataaatcccatccggtcaacaacgtgagaaccttcaggtccggtgccggt
cagaaacaggagccctgcccgggcagtttattccgaggagggaataagaaaatgagtaca
gttcagagagatgttttaagtttgctggatctctctcctcgacacgagtctgccaggaaa
cacatggacacacctgaggacgacagctctgaccgcagaccaaacggtcaccaaaaacag
gaggtgggagcgcctccatcttcatctgctggacctcccacaaactctaaaggcggcatc
agactttcctctgggaatggctacaagtttctctcacctggacagtttttcccatcttct
aaatgctga
DBGET
integrated database retrieval system
