Cololabis saira (Pacific saury): 133455189
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Entry
133455189 CDS
T09849
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133455189 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133455189 (exosc2)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133455189 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
133455189 (exosc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
133455189
NCBI-ProteinID:
XP_061590090
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Position
11:23870237..23877089
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AA seq
292 aa
AA seq
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MAADMRLPSVRKLIPFSVSAADQKDLVVPGDVITPEAGFMRGHGTYVDDDKLTASVAGQV
ERVDKLICVRPFQTRFYGEIGDVVVGRITEVQQKRWKVETNSRLDSMLLLSSINLPGGEL
RRRSVEDELTMREYLEEGDLISAEVQSVFSDGSLSLHTRSLKYGKLGQGVLVQVSPSLIK
RQKSHFHNLPCGASIILGNNGYVWLFPTSEQDEQAGGFYTDLEPVSLSDREVISRLRNCL
LALAAHKVPLYDTSVLYCFESSLEHQVKDILKPEVMEEIVMLTHHKLLEQEG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacatgagattaccgagtgttaggaaattaattcctttctcagtttctgct
gcagaccaaaaagatctggtggtccctggcgatgtcatcactccagaagctggttttatg
aggggtcatggcacctatgttgacgatgacaagctgactgcttcagtagctgggcaggtt
gagagggtggacaaacttatatgtgtcagaccatttcagaccagattctatggcgagatt
ggagatgttgtggttggcagaattacagaggtacaacaaaaaaggtggaaggtggagacc
aactccagacttgactctatgctcttgttgtcgtctatcaatctgcctggaggagaactg
aggagaagatcagtagaagatgaactcaccatgagggagtatcttgaagagggcgatcta
atcagtgcagaggtgcagtctgtgttctcagatggttccctgtctcttcatactcgtagt
ttaaagtatggaaaattgggtcagggagtactggtacaggtttccccttctctgatcaag
aggcagaagtcacatttccacaacttaccttgcggcgcatccataatccttggaaataat
ggctatgtgtggctgtttcccacatcggaacaggatgagcaagctgggggtttctacacc
gacctggagcctgttagcctgtcggatcgagaggtgatttctaggttgagaaactgcctg
ctggctttggctgcacacaaagtcccgctgtatgacaccagtgttctctactgcttcgaa
tcttcgctcgagcaccaggtcaaagacatcctaaaacctgaggtgatggaggagattgta
atgttgacgcatcataaactgttggaacaagaaggttaa
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