KEGG   Cololabis saira (Pacific saury): 133455189
Entry
133455189         CDS       T09849                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133455189 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133455189 (exosc2)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     133455189 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     133455189 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1
Other DBs
NCBI-GeneID: 133455189
NCBI-ProteinID: XP_061590090
LinkDB
Position
11:23870237..23877089
AA seq 292 aa
MAADMRLPSVRKLIPFSVSAADQKDLVVPGDVITPEAGFMRGHGTYVDDDKLTASVAGQV
ERVDKLICVRPFQTRFYGEIGDVVVGRITEVQQKRWKVETNSRLDSMLLLSSINLPGGEL
RRRSVEDELTMREYLEEGDLISAEVQSVFSDGSLSLHTRSLKYGKLGQGVLVQVSPSLIK
RQKSHFHNLPCGASIILGNNGYVWLFPTSEQDEQAGGFYTDLEPVSLSDREVISRLRNCL
LALAAHKVPLYDTSVLYCFESSLEHQVKDILKPEVMEEIVMLTHHKLLEQEG
NT seq 879 nt   +upstreamnt  +downstreamnt
atggctgcggacatgagattaccgagtgttaggaaattaattcctttctcagtttctgct
gcagaccaaaaagatctggtggtccctggcgatgtcatcactccagaagctggttttatg
aggggtcatggcacctatgttgacgatgacaagctgactgcttcagtagctgggcaggtt
gagagggtggacaaacttatatgtgtcagaccatttcagaccagattctatggcgagatt
ggagatgttgtggttggcagaattacagaggtacaacaaaaaaggtggaaggtggagacc
aactccagacttgactctatgctcttgttgtcgtctatcaatctgcctggaggagaactg
aggagaagatcagtagaagatgaactcaccatgagggagtatcttgaagagggcgatcta
atcagtgcagaggtgcagtctgtgttctcagatggttccctgtctcttcatactcgtagt
ttaaagtatggaaaattgggtcagggagtactggtacaggtttccccttctctgatcaag
aggcagaagtcacatttccacaacttaccttgcggcgcatccataatccttggaaataat
ggctatgtgtggctgtttcccacatcggaacaggatgagcaagctgggggtttctacacc
gacctggagcctgttagcctgtcggatcgagaggtgatttctaggttgagaaactgcctg
ctggctttggctgcacacaaagtcccgctgtatgacaccagtgttctctactgcttcgaa
tcttcgctcgagcaccaggtcaaagacatcctaaaacctgaggtgatggaggagattgta
atgttgacgcatcataaactgttggaacaagaaggttaa

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