Cololabis saira (Pacific saury): 133455225
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Entry
133455225 CDS
T09849
Symbol
arvcfa
Name
(RefSeq) splicing regulator ARVCF
KO
K28154
splicing regulator ARVCF
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133455225 (arvcfa)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133455225 (arvcfa)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
V-ATPase_H_N
Adaptin_N
Arm_2
Atx10homo_assoc
Symplekin_C
KAP
Motif
Other DBs
NCBI-GeneID:
133455225
NCBI-ProteinID:
XP_061590143
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Position
11:25082769..25114309
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AA seq
892 aa
AA seq
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MPAEVKEEQSSEGTPELSLSQEVKEATQENPAAADELDTPTSIASVMTSTNESSTDTTNT
SHQMETEEPKSVEQEGEKVLSETQETSEKQQENGLIFDQTDPTSALEAQDSTSSQQLTSE
AKAEASESVTATTTTTTVTPQPQLALQPGEPHAVTLDSQSRVYTIPDAFRGISGDMYPGY
GSLSRFTLHGYLPTKNFQPGANYTLPFLRDIYTPTGLSNPSEEDRENLLDKKTDHSAASY
PALGGLQQFRPITTMELLREPSRTRSGYDDAFMAQLEGNLNPFFQAMCRAQTLQLPNKRS
SMVSLDSIRRDPRWRDPNLHEVISMLSHPMDPVKSNAAAYLQHLCYENDRIKQEVRQLNG
VPILVELLDHPKAEVHRKACGALRNISYGKDHNNKMAIKNCDGIQSLVRLLRKSSTVEVK
ELVTGTLWNLSSHEPLKMTVINQGLQTLTDEIIIPHSGWRRRDSANASKLQSAEWTTVFK
NTTGCLRNVSSDGAEARQRLRECEGLVAALIHALQSAVINKDTGNKSVENCVCILRNLSY
HVHKEVPGAERLQEPHAGHLMRSVGHQKKKNDPECCAGKKPKEEWFSQGWKNGFMDRNCS
TLDLPKRTELLKGLELLYQPEVVRLYLSLLTCSRNHNTLEAAAGALQNLAAGHWAWSSYI
RVTVRKEKGLPILVELLRSDVDKVVRAVAIALRNLAIDRRNKDLIASYALRDLIGNLPCG
QQHPAKNLEGDTVVSILNTIYEIIVDNPENARALIQCNGVQKLVAINKSSQSARETKAAS
HVLQTIWAYKELRNTLNKAGWNKSHFKPTTSGATKKSKSAKQSGDDITLPLMDKSQDVYS
TLEPNGRVGDGKGPVLERDTLQATSERKHFIRAGRPAVGLMDNKPPPLDSWV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagtcaaagaggagcagagttcagaggggacccctgaactctctttgtcc
caggaagtgaaagaagcaacccaagaaaacccagcagccgccgatgaactggacacgccc
acttcaattgcctctgtgatgacctcgaccaatgaaagctccacagacaccacgaacacc
tcacatcagatggaaactgaggagcccaaatctgtggaacaagagggtgaaaaggttttg
agtgagacccaggaaacctcagagaagcaacaggagaatggcctcatatttgatcaaact
gatcccacatcggctttggaagctcaagatagcacttccagccagcagcttacttctgaa
gcaaaagctgaagcctctgagtcagtcacagcaactacaacaaccaccactgtaactcca
caacctcagcttgcgctgcagcctggagagcctcatgcagtgaccctggacagccagagc
agagtgtatacaatccctgatgcatttagaggcatcagtggcgacatgtacccaggatat
gggagcctttctcgcttcaccctccatggttacctgccaaccaaaaacttccagccgggg
gctaactacactttacccttcctgagggacatctacacccccacaggcctcagcaaccca
tcagaggaggacagagaaaaccttctggacaagaagacggatcattcagctgccagttat
ccagcactgggtggactccagcagtttaggccaataaccacaatggagctcctccgggag
ccctcaagaaccaggagtggttatgatgatgcgttcatggcccagctggaggggaacctg
aatcctttcttccaggccatgtgccgagcccagaccctgcagcttcccaacaagcgcagc
agcatggtaagcctggacagcatccggagagacccacgctggagagaccccaatctgcac
gaggtgatctcgatgctcagccacccaatggacccagtaaagtccaatgccgctgcatat
ttgcagcacttatgttatgagaatgatcgaatcaagcaggaggtccgccaactaaacggg
gttcccatcttggtggaattactggaccatcctaaggctgaagtccaccgcaaggcttgt
ggtgctttgagaaacatatcctatggaaaagaccacaataataaaatggccataaagaac
tgtgatggcatccaatctttagtaagactgctgagaaagtcaagcactgtggaggtcaaa
gagttggtcacaggcactctatggaacctctcatcacatgagccactcaagatgacggtc
atcaaccaaggacttcagacactgactgatgaaatcatcatcccacactcaggctggagg
aggagagactcagccaacgcctccaaactgcagagcgctgagtggacaactgtctttaag
aacaccactggatgcctgaggaacgtcagctcggacggggcagaggctcggcagagactg
agggagtgtgaggggttggtggcagccctcattcatgccctccagtcagcggtcatcaac
aaggacactggcaataagtcggtggagaattgtgtctgcatccttcgaaacctgtcctat
catgttcacaaagaagtaccaggagctgaacggcttcaggagccccatgctggtcatctc
atgagatctgtggggcatcagaagaagaagaatgaccctgaatgttgtgcagggaaaaaa
cctaaagaggagtggtttagtcaaggttggaagaatggatttatggacagaaattgcagt
acactggacttaccaaaacgcacagaacttttgaaaggcttggagcttctgtaccagcca
gaggtggtgaggctttacctctctcttctcacctgcagtcgcaaccacaacaccctggag
gcagctgcaggagcgctgcagaatctcgctgctggacactgggcttggtccagctacatt
cgagtgacagtcagaaaagagaaggggctgcccattctggtggagctgctgcgctccgac
gtggacaaagttgtaagagctgtggccattgctcttcgcaacctggccattgatagaagg
aataaagatttaatcgcaagctacgctctgagggacctcattggtaatctcccttgtggg
cagcagcacccagcaaagaatcttgagggggacactgtggtgtccatcctcaacacaatt
tatgagatcatcgtggataaccctgagaacgctcgagcactcatacagtgtaacggggtg
cagaaactggtggccatcaataagtcaagccaatcagctcgggagaccaaagcagcatcc
catgtgcttcagacaatatgggcctacaaggagctgagaaacactttaaacaaagcaggc
tggaacaagagccactttaagcccacaacttctggagcgacaaaaaagtccaagagtgca
aagcaaagtggcgatgacatcaccttgccgctcatggacaaaagccaagatgtatactcc
accttggaaccaaacggcagagttggagatggaaagggccccgttctagaaagagacaca
cttcaggcgacgagtgaaaggaaacacttcatcagagctggcaggcctgcagtgggcctc
atggataataaacctccaccactggactcctgggtgtaa
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