Cololabis saira (Pacific saury): 133455364
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Entry
133455364 CDS
T09849
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133455364 (nefma)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
133455364 (nefma)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
HR1
Motif
Other DBs
NCBI-GeneID:
133455364
NCBI-ProteinID:
XP_061590337
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Position
11:complement(31724877..31730666)
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AA seq
1198 aa
AA seq
DB search
MSYPADTIGSPFRRMDSRTSSYGYGRPAGTPSSGFRSQSWSRASPGSTMTASYKRSVNVP
VSRAYSSAVLGSADSGDYNGDYKRSNEKEQLQGLNDRFVVYIDKVHYLEQQNQQIEAEIQ
ALRQKQVSRTQLDSLYDQELQELRSVLEQVHRDKAQVQLDTDHIEEDIQRLRDRFEEEAR
IREETEAIVRLLKKDTNDSELVKSELEKKVQSLQDEIAFIRNNHEEEVSELIAQIQASQL
SVERKDLQRADITEALREIRSELEGHSNQNLQQVETWFMCRYAKLTEAAEQNKDAIKSAR
DEISDYRRQLQSKTVELESVRGTKDSLERQLNDIEDRHNNDLASLQETVHQLDNELKSTK
WEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTSTKISKKSETSK
IKVHHKFVEEIIEETRVEDEKVDMDEALAEIAQELSATLGEGEEEEGGEEEEAEGEGEEE
GEEEDEIVAATEAKVSTSAPSEEKEEDEEEGGDEGEDGEGEGGEDIEKEEEKEEEEEEVE
EGEGEDEGEKGGDAEEEEEEVEEVEETVLCSKAPESKASPDEEKVEDKEGSEGEDTGAGE
EDEDQDEDAGSEKACTSGDEKEEKVDADIVEKDDEKVKSEIDDDQTEITPAKSEALKTEV
ATSEATKEEASKIELPLSKPASPKSESPKPASPKSESPKAGSPKSESPKPASPKSESPKA
GSPKSESPKAGSPKSESPKAGSPKSESPKAGSPKSESPKAGSPKSESPKAGSPKSESPKA
GSPKSESPKAGSPKSESPKAGSPTFEFPKAGSPKSESPKPASPKSESPKAVSPTSESPKA
GSPKSESPKAGSPKSESPKAGSPKSESPKPASPTSESPKAGSPKSESPKAGSPKSESPKV
GSPKSESPKPASPTSESPKAVSPTSESPKAGSPKSESPKAGSPRSESPKAASPKSESPKA
GSPKSESPKAGSPTSESPKAGSPKSESPKAGSPTSESPKAGSPKSESPKAASPKSESPKA
GSPKSESPKPVSLKAESPKSESPKLVSPKAESPKPSSPKDETPGTKTTEPEAPKEETSEK
SDSTDEKKVEKKDVAMNGDIDKSSPEEKEKKDEGEDVDVIANGVDESPVKEDGSQKVVIT
KTVETITTGEDGSKHVTKSITVTETVKESEEMLEEKMVSTKKMEKHSTQSIKQVTEGD
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgagttacccggcggacacgataggaagccccttcaggaggatggacagtagaacgagc
agctacggctacggccgccccgccggcaccccgtccagcggattccgctcccagtcctgg
tccagggccagccccggctccaccatgaccgcgtcctacaagaggagcgtcaacgtgccg
gtgtcccgggcgtacagctccgccgtgctgggctccgcagacagcggtgattacaacgga
gactacaagcggtccaacgagaaagagcagctgcaggggctcaacgaccggttcgtcgtt
tacatcgacaaggtgcactacctggagcagcagaaccagcagatcgaggcggagatccag
gcgctgcggcagaagcaggtgtcccgcacccagctggacagcctgtacgaccaggagctg
caggagctgcgctccgtgctggagcaggtgcaccgcgacaaggcgcaggtgcagctggac
accgaccacatcgaggaggacatccagcggctcagagaccgctttgaggaagaggctcgc
atccgcgaggagaccgaggccatcgtccgcttgttgaagaaggacaccaacgactcggag
ttggtgaagtccgagctggagaagaaagttcagtcgctgcaggatgagatcgccttcatc
cgcaacaaccacgaggaggaggtgagcgagctcatcgcgcagatccaggcgtctcagctg
agcgtggagaggaaggacctgcagagggcggacatcaccgaggctctgcgggagatccgc
agcgagctggagggccactccaaccagaacctgcagcaggtggagacctggttcatgtgc
cgctacgccaagctcaccgaggccgcggagcagaacaaggacgccatcaagtccgcccgg
gatgagatatccgactaccgtcgccagctgcagtccaagacggtggagctggagtccgtc
cgcgggaccaaggactcgctggagagacaactcaatgacatcgaggaccgccacaacaac
gacctggccagtctgcaggagacagttcaccagctggataatgagctcaagagcaccaag
tgggagatggctcgtcatcttcgtgagtatcaggacctgctgaatgtcaagatggccttg
gatattgaaattgctgcatacaggaaactcttagagggggaggagacccacttcagtact
ttcccttatcgccaggcagtcacttccaccaaaatctccaaaaagtctgagacctcaaag
attaaagtacaccacaagtttgtggaggagatcattgaggagaccagggtggaggacgaa
aaggttgacatggatgaggccctggcagagatagcacaagagctgtctgcaactctggga
gagggagaagaggaagagggtggagaggaagaagaagcagagggggaaggagaagaggaa
ggagaagaggaggatgaaattgtagctgctaccgaagctaaagttagcactagtgcaccc
tctgaggaaaaggaagaggatgaggaagaaggtggtgatgagggagaggatggtgagggt
gaaggtggtgaggatatagagaaagaagaagaaaaagaagaggaagaagaagaagtagaa
gaaggggagggagaagatgaaggagaaaaggggggtgatgcagaggaagaagaagaagag
gtggaggaagttgaggagacagtattgtgctccaaagctccagagtccaaagcctctcct
gatgaagagaaggttgaggataaggagggcagcgaaggagaggacacaggtgccggagag
gaggatgaggatcaggatgaagatgcaggcagtgagaaagcatgcacaagtggagatgag
aaagaggaaaaagtagatgcagacatagttgaaaaggatgatgagaaggtaaaaagtgag
atagacgatgaccagacagaaataactcctgcaaaatctgaagccctaaaaacagaagtt
gcaacgtctgaggctaccaaggaagaggcgtccaaaatagagttgcctctatcaaagcct
gcttcccccaagtctgaatcaccaaagcctgcttcccccaagtctgaatcaccaaaggct
ggttcccccaagtctgaatcaccaaagcctgcttcccccaagtctgaatcaccaaaggct
ggttcccccaagtctgaatcaccaaaggctggttcccccaagtctgaatcgccaaaggct
ggttcccccaagtctgaatccccaaaggctggttcccccaagtctgaatcaccaaaggct
ggttcccccaagtctgaatcaccaaaggctggttcccccaagtctgaatccccaaaggct
ggttcccccaagtctgaatccccaaaggctggttcccccaagtctgaatccccaaaggct
ggttcccccacatttgaattcccaaaggctggttcccccaagtctgaatccccaaagcct
gcttcccccaagtctgaatccccaaaagctgtttcccccacatctgaatccccaaaggct
ggttcacccaagtctgaatccccaaaggctggttcacccaagtctgaatcaccaaaggct
ggttcccccaagtctgaatccccaaagcctgcttcccccacatctgaatccccaaaggct
ggttcacccaagtctgaatcaccaaaggctggttcacccaagtctgaatcaccaaaggtt
ggttcccccaagtctgaatccccaaagcctgcttcccccacatctgaatccccaaaggct
gtttcccccacatctgaatccccaaaagctggttctcccaagtctgaatccccaaaggct
ggttctcccaggtctgaatcaccaaaagcggcttcccccaagtctgaatcaccaaaggct
gggtcccccaagtctgaatcaccaaaggctggttcccccacatccgagtccccaaaggct
ggttcccccaagtctgaatcaccaaaggctggttcccccacatccgagtccccaaaggct
ggttcccccaagtctgagtcaccaaaagctgcttcccccaagtctgaatctccaaaggct
ggttctcccaagtctgaatcaccaaaacccgtgtccctgaaagctgaatctccaaagtct
gagtccccaaaattagtctcacctaaagctgaatccccaaaacctagctcccccaaagac
gagaccccaggcaccaaaaccactgagcctgaggctcctaaagaagaaacatctgagaag
agtgactcaacagatgagaaaaaggtagaaaagaaggatgttgccatgaatggagacata
gacaagagcagcccagaggagaaagagaagaaagatgagggggaggatgttgatgtgatc
gctaacggtgtagatgagagccctgtcaaggaagatggcagccagaaagttgtgatcacc
aagactgtagagacaatcaccaccggagaggatggatccaagcatgtcaccaaatctatc
actgtgacggaaacagtgaaggagtcggaggagatgctggaggagaagatggtctccacc
aagaagatggaaaagcactccactcagtccattaagcaggtgacagaaggtgactga
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